BAC Information

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BAC

Clone NameB6Ng01-018B16
Chromosome14 (Build37)
Map Location 112,097,649 - 112,213,388
singlet/doubletdoublet
Overlap genenone
Upstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494, Slitrk5
Downstream geneLOC100043501, EG223186
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018B16.bB6Ng01-018B16.g
ACCDH851598DH851599
length1,0201,096
definitionDH851598|Mus musculus domesticus DNA, BAC clone: B6Ng01-018B16, 5' end.DH851599|Mus musculus domesticus DNA, BAC clone: B6Ng01-018B16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,212,831 - 112,213,388)(112,097,649 - 112,098,741)
sequence
gaattctagtcactgaaatccttccagttctgacttactctgccaggttc
tttgtttgtttggttttggtttttgtttttgtttttgttttgatttttca
aaacaaccttgagattccacctcacaccagtcaaaatggctaagatcaaa
aatttaggtaacagcagatgctggtaaggatgtgaagaaagagggacact
cctccattgttgatgggattgcaagcttgtacaaccactctggaagtcag
tctggacgttcctcagaaaattggacatagtactactggaagatccaaca
atacctctcctgggcatatatccagaagatgttccaactagtaataagaa
cacatgctccactatgttcatagcagccttgtttatgatagccagaagct
ggaaagaactctgcaaggttcttaggtagcctctttcttgtctattctta
tgagaatttcctactgtgactgattctgtcaaatttttttgaattcaata
ttttgactctcaattagatgttactttcaaacatagctgcttccttctac
aaaatagctttaccttcattgtttgggattgaaagagtataataagggca
tgcctatattcttgcctgaagaattaaaggtgtctggtatgtctgcattc
cagtggaatcatggagatctagttctatggatgtgatcagaacagccatg
tagctggattaaaatttatataaaatgttttcaaaatctagtaaatttta
aaatgtttacaatataaaagtgaccaacctttcttccttaaaattgcttt
cctgagaaatcacatacatttctaggaattaaaattcagtctctaacata
attcagaccccacattgagcttcaaatccatatacctctcacacactaat
aatgtctgtctgctgcacacgcatatcttcttcactatctggctcaatga
tgcaaacactgaaaatgtttctttctcttcctatactaagccatattatt
acctatatggactctgaccc
gaattctatagagagattcgcataattttttcatattttcttcttaaaat
tcatcacgctacaaggttattagttcggaacacttctgttaaaacctctg
aagaaaacattttcaatttatttgcctaaagcttttatatttcatagaaa
ttatggctcctgtgtgcattttaattttctttcttctaaccaaaaccaat
tcaatttatttggaaagcactgtagtgggttggatcctgttatggtttga
aggttccattcaaaagtcatactgaaattcaattgctgttgtaatgttat
gaagaggtgacattacagggtagccaggtcatggaggctctgtgctcata
aatgaaataaggctgttatatcaggacttagttatgggagatacagtctg
acaaattttctctcgtctcacacgtgtgttcttgttcctctgtcaaatta
tggcacagcatggagaccttcggcagataccagagcaatgctcttggaca
ttccctagtctccgaatgtaaccgatacatttttttagaaaccaatttat
ctactacatgatattctcatagagcagcaagaactaaaggcaacagatac
tcaaaaagtgatcctaaaaacaaatagtactagaaataagtgctatctat
atactctgaaggtcttccttcgactaggaaatcccccagtcacagatgaa
aggaggaggagagagcctccttgatttgccttctcttttccttccttctt
ttgtgagctttcttgtgtcgtcttctcttttttccttcctccttttcatt
ctagtaagcatttagaatagttagctaagttcatagcaaatcaagcagta
ctggctgccttgtaaagaggtgaatcactcaaaacacacaaaaatatttc
accaatatttcctgtctggctgtgttcagtatattagtgactgtggctga
cttttatactatatattcacaattaggtatgcttgtagttaactgccaca
cagttcagtatgttataggcatagaggtatggatggtgcccagaaagtat
gttccttggtcataaccctacagaaaatggtcttatggaaatataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112212831_112213388
seq2: B6Ng01-018B16.b_45_602 (reverse)

seq1  GCTATTTTGTAGAAGGAAGCAGCTATGTTTGAAAGTAACATCTAATTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTTGTAGAAGGAAGCAGCTATGTTTGAAAGTAACATCTAATTGAG  50

seq1  AGTCAAAATATTGAATTCAAAAAAATTTGACAGAATCAGTCACAGTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAATATTGAATTCAAAAAAATTTGACAGAATCAGTCACAGTAGGA  100

seq1  AATTCTCATAAGAATAGACAAGAAAGAGGCTACCTAAGAACCTTGCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCATAAGAATAGACAAGAAAGAGGCTACCTAAGAACCTTGCAGAG  150

seq1  TTCTTTCCAGCTTCTGGCTATCATAAACAAGGCTGCTATGAACATAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCAGCTTCTGGCTATCATAAACAAGGCTGCTATGAACATAGTGG  200

seq1  AGCATGTGTTCTTATTACTAGTTGGAACATCTTCTGGATATATGCCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTGTTCTTATTACTAGTTGGAACATCTTCTGGATATATGCCCAGG  250

seq1  AGAGGTATTGTTGGATCTTCCAGTAGTACTATGTCCAATTTTCTGAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTATTGTTGGATCTTCCAGTAGTACTATGTCCAATTTTCTGAGGAA  300

seq1  CGTCCAGACTGACTTCCAGAGTGGTTGTACAAGCTTGCAATCCCATCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCAGACTGACTTCCAGAGTGGTTGTACAAGCTTGCAATCCCATCAAC  350

seq1  AATGGAGGAGTGTCCCTCTTTCTTCACATCCTTACCAGCATCTGCTGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGAGTGTCCCTCTTTCTTCACATCCTTACCAGCATCTGCTGTTA  400

seq1  CCTAAATTTTTGATCTTAGCCATTTTGACTGGTGTGAGGTGGAATCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATTTTTGATCTTAGCCATTTTGACTGGTGTGAGGTGGAATCTCAA  450

seq1  GGTTGTTTTGAAAAATCAAAACAAAAACAAAAACAAAAACCAAAACCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTTTGAAAAATCAAAACAAAAACAAAAACAAAAACCAAAACCAAA  500

seq1  CAAACAAAGAACCTGGCAGAGTAAGTCAGAACTGGAAGGATTTCAGTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAGAACCTGGCAGAGTAAGTCAGAACTGGAAGGATTTCAGTGAC  550

seq1  TAGAATTC  558
      ||||||||
seq2  TAGAATTC  558

seq1: chr14_112097649_112098741
seq2: B6Ng01-018B16.g_65_1160

seq1  GAATTCTATAGAGAGATTCGCATAATTTTTTCATATTTTCTTCTTAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGAGAGATTCGCATAATTTTTTCATATTTTCTTCTTAAAAT  50

seq1  TCATCACGCTACAAGGTTATTAGTTCGGAACACTTCTGTTAAAACCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACGCTACAAGGTTATTAGTTCGGAACACTTCTGTTAAAACCTCTG  100

seq1  AAGAAAACATTTTCAATTTATTTGCCTAAAGCTTTTATATTTCATAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACATTTTCAATTTATTTGCCTAAAGCTTTTATATTTCATAGAAA  150

seq1  TTATGGCTCCTGTGTGCATTTTAATTTTCTTTCTTCTAACCAAAACCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCTCCTGTGTGCATTTTAATTTTCTTTCTTCTAACCAAAACCAAT  200

seq1  TCAATTTATTTGGAAAGCACTGTAGTGGGTTGGATCCTGTTATGGTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTATTTGGAAAGCACTGTAGTGGGTTGGATCCTGTTATGGTTTGA  250

seq1  AGGTTCCATTCAAAAGTCATACTGAAATTCAATTGCTGTTGTAATGTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCATTCAAAAGTCATACTGAAATTCAATTGCTGTTGTAATGTTAT  300

seq1  GAAGAGGTGACATTACAGGGTAGCCAGGTCATGGAGGCTCTGTGCTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGTGACATTACAGGGTAGCCAGGTCATGGAGGCTCTGTGCTCATA  350

seq1  AATGAAATAAGGCTGTTATATCAGGACTTAGTTATGGGAGATACAGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATAAGGCTGTTATATCAGGACTTAGTTATGGGAGATACAGTCTG  400

seq1  ACAAATTTTCTCTCGTCTCACACGTGTGTTCTTGTTCCTCTGTCAAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTTTCTCTCGTCTCACACGTGTGTTCTTGTTCCTCTGTCAAATTA  450

seq1  TGGCACAGCATGGAGACCTTCGGCAGATACCAGAGCAATGCTCTTGGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACAGCATGGAGACCTTCGGCAGATACCAGAGCAATGCTCTTGGACA  500

seq1  TTCCCTAGTCTCCGAATGTAACCGATACATTTTTTTAGAAACCAATTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAGTCTCCGAATGTAACCGATACATTTTTTTAGAAACCAATTTAT  550

seq1  CTACTACATGATATTCTCATAGAGCAGCAAGAACTAAAGGCAACAGATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTACATGATATTCTCATAGAGCAGCAAGAACTAAAGGCAACAGATAC  600

seq1  TCAAAAAGTGATCCTAAAAACAAATAGTACTAGAAATAAGTGCTATCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAGTGATCCTAAAAACAAATAGTACTAGAAATAAGTGCTATCTAT  650

seq1  ATACTCTGAAGGTCTTCCTTCGACTAGGAAATCCCCCAGTCACAGATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTGAAGGTCTTCCTTCGACTAGGAAATCCCCCAGTCACAGATGAA  700

seq1  AGGAGGAGGAGAGAGCCTCCTTGATTTGCCTTCTCTTTTCCTTCCTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGGAGAGAGCCTCCTTGATTTGCCTTCTCTTTTCCTTCCTTCTT  750

seq1  TTGTGAGCTTTCTTGTGTCGTCTTCTCTTTTTTCCTTCCTCCTTTTCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGCTTTCTTGTGTCGTCTTCTCTTTTTTCCTTCCTCCTTTTCATT  800

seq1  CTAGTAAGCATTTAGAATAGTTAGCTAAGTTCATAGCAAATCAAGCAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAAGCATTTAGAATAGTTAGCTAAGTTCATAGCAAATCAAGCAGTA  850

seq1  CTGGCTGCCTTGTAAAGAGGTGAATCACTCAAAACACACAAAAATATTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGCCTTGTAAAGAGGTGAATCACTCAAAACACACAAAAATATTTC  900

seq1  ACCAATATTTCCTGTCTGGCTGTGTTCAGTATATTAGTGACTGTGGCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATATTTCCTGTCTGGCTGTGTTCAGTATATTAGTGACTGTGGCTGA  950

seq1  CTTTTATACTATATATTCACAATTAGGTATGCTTGTAG-TAACTG-CACA  998
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  CTTTTATACTATATATTCACAATTAGGTATGCTTGTAGTTAACTGCCACA  1000

seq1  CAGTTCAGTATTGTTATAGGCATAGA-GTATGGATGTTGCCCAGAAAGTA  1047
      |||||||||| ||||||||||||||| ||||||||| |||||||||||||
seq2  CAGTTCAGTA-TGTTATAGGCATAGAGGTATGGATGGTGCCCAGAAAGTA  1049

seq1  TGTTCCTT-GTCATAACTCCTACAGAAAAATGTCTTATTGAAA-ATAA  1093
      |||||||| |||||||| |||||||||||  ||||||| |||| ||||
seq2  TGTTCCTTGGTCATAAC-CCTACAGAAAATGGTCTTATGGAAATATAA  1096