BAC Information

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BAC

Clone NameB6Ng01-018L02
Chromosome14 (Build37)
Map Location 60,453,511 - 60,575,106
singlet/doubletdoublet
Overlap geneAtp8a2
Upstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46
Downstream geneLOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep, LOC100043586
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018L02.bB6Ng01-018L02.g
ACCDH852021DH852022
length1,0561,000
definitionDH852021|Mus musculus domesticus DNA, BAC clone: B6Ng01-018L02, 5' end.DH852022|Mus musculus domesticus DNA, BAC clone: B6Ng01-018L02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,453,511 - 60,454,417)(60,574,124 - 60,575,106)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggctcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatcatttgaccttaatgtgcaagccagacatagtatctggttcttttct
ttctaacccccttcattacggcacctactcaaatgcatgtatgaataagt
ttacatgtattttcctcagtatagaaatcaatgtatcattttagaatatt
aaaaaaattatataaggccacagaacataccttccataaatttggtagtc
taataaaaaaatgcatgttctcatactcccccctgccttggcatgtgttt
atatgcacacatattgtactttgagtttctaggatgtaaacatattactc
tttaccctcacagtgccttctctggttattaaaatgctcattacccttat
ttttaggacacacgggacctcataacctgcaatgcatttctagtgttcat
gttcag
gaattcacagtggtgtacttagacagaagcacccgttcacagtcactgcc
ctaacctgaattagggatcagtctggtggggatgcatgagcccttgttaa
caaccttgttcttcaggatcctatggggaactggcttttggctacagata
gcccttaaagctggctgctggttgatttgagatacaactgaaatgtataa
aaacttgcacctgtgcttaaggtgcctttgagcaaggtgtcttaattcct
cacatgactcttattgcatcaaagaaaattttgtacatgcagctgtgagc
tcatttctaagtgctttgccaattaacagatggatggcagtcactggtga
aagagggaaaagaatcagctcaactcacatggcaggaaggtgacaaggaa
agagcatttgacgtctgatggagacatcccagttaacatgcaaggatacc
acaaataggatgtggtagtgccattgggcatgtgtgtggggacatcaagg
cctggtcagaagcatatttcgtaagtgacagagctaagattaaaattcaa
ttccgaataaataagatactattaaggcagtttccgaaatgtcagttaaa
ataaaatggaccctgatgccgttcaaactttgttcaatgaggaatgactt
ttgcatcaggattaattcttttttgtttgttttgttttgtttttgtttta
tgtttttttgagacagggtttctctgtatagccctggctgtcctggaact
cactttgtaggccaggctggcctcgaactcagaaatctgtctgcctctgc
ctcccaagtgctgggattaaaggtgtgttgccaccactgcccggctgctg
ctgctgctgctgctgctgctgctgctgctgctgctgctgctgctgcttct
gctgctgcttcttcttctcttcttctcttctcttcttcttcttcttctct
tctgcttctcttctccttctcatctcatctctctctctcttttctccttc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60453511_60454417
seq2: B6Ng01-018L02.b_200_1098

seq1  TTATAGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTC  50

seq1  CCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCA  100

seq1  GGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCC  150

seq1  TCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCATTT  200

seq1  AGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTC  250

seq1  TACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCT  300

seq1  TTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATA  350

seq1  GGTGTGTGGGTTCATTTCTGGCTCTTCAATTCTATTCCATTGGTCTACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTGGGTTCATTTCTGGCTCTTCAATTCTATTCCATTGGTCTACTT  400

seq1  GTCTGTCTCTATACCAGTACCATGCAGTTTTTACCACAATTGCTCTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTCTATACCAGTACCATGCAGTTTTTACCACAATTGCTCTGTAG  450

seq1  TAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCATT  500

seq1  TGACCTTAATGTGCAAGCCAGACATAGTATCTGGTTCTTTTCTTTCTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTAATGTGCAAGCCAGACATAGTATCTGGTTCTTTTCTTTCTAAC  550

seq1  CCCCTTCATTACGGCACCTACTCAAATGCATGTATGAATAAG-TTACATG  599
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCCCTTCATTACGGCACCTACTCAAATGCATGTATGAATAAGTTTACATG  600

seq1  TATTTTCCTCAGTATAGAAATCAATGTATCATTTTAGAATATTAAAAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCTCAGTATAGAAATCAATGTATCATTTTAGAATATTAAAAAAA  650

seq1  TTATATAAGGCCACAGAACATACCTTCCATAAATTTGGTAGTCTAATAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAGGCCACAGAACATACCTTCCATAAATTTGGTAGTCTAATAAA  700

seq1  AACATGCATGTTCTCATACTCCCCCCTGCCTTGGCCATGTGTTTTATATG  749
      || ||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  AAAATGCATGTTCTCATACTCCCCCCTGCCTTGG-CATGTG-TTTATATG  748

seq1  CACACATATTTGTACTTTGAGTTTCTAGGATGTAAACATATTACTCTTTA  799
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CACACATA-TTGTACTTTGAGTTTCTAGGATGTAAACATATTACTCTTTA  797

seq1  CCCTCACAGTGCCTTCTCTTGGTTATTAAAAATGCTCATTAACCTTATTT  849
      |||||||||||||||||| |||||||| ||||||||||||| ||||||||
seq2  CCCTCACAGTGCCTTCTC-TGGTTATT-AAAATGCTCATTACCCTTATTT  845

seq1  TTAAGTACACACGGGGACCTCAT-ACCTGCAAATGCAGTTTCTAAGTGTT  898
      || || |||||| |||||||||| |||||| |||||| ||||| ||||||
seq2  TT-AGGACACAC-GGGACCTCATAACCTGC-AATGCA-TTTCT-AGTGTT  890

seq1  CATGGTCAG  907
      |||| ||||
seq2  CATGTTCAG  899

seq1: chr14_60574124_60575106
seq2: B6Ng01-018L02.g_67_1066 (reverse)

seq1  GAAGGAGAA---GGAGAAGGAGA----AGGAGAAGGAGAAGGAGAAGAAG  43
      |||||||||    ||||  ||||    | ||||||||||| |||||| ||
seq2  GAAGGAGAAAAGAGAGAGAGAGATGAGATGAGAAGGAGAA-GAGAAGCAG  49

seq1  A--AGAAGAAGAAGAAGAAGA----AGAAGA--AGAAGAAGAAGCAGCAG  85
      |  ||||||||||||||||||    ||||||  |||||||||||||||||
seq2  AAGAGAAGAAGAAGAAGAAGAGAAGAGAAGAAGAGAAGAAGAAGCAGCAG  99

seq1  CAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA  135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA  149

seq1  GCAGCAGCCGGGCAGTGGTGGC-ACACACCTTTAATCCCAGCACTTGGGA  184
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCAGCAGCCGGGCAGTGGTGGCAACACACCTTTAATCCCAGCACTTGGGA  199

seq1  GGCAGAGGCAGACAGATTTCTGAGTTCGAGGCCAGCCTGGCCTACAAAGT  234
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGACAGATTTCTGAGTTCGAGGCCAGCCTGGCCTACAAAGT  249

seq1  GAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTC-AAAAAAC  283
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAAAAAC  299

seq1  AT-AAACAAAAACAAAACAAAACAAACAAAAAAGAATTAATCCTGATGCA  332
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACAAAAACAAAACAAAACAAACAAAAAAGAATTAATCCTGATGCA  349

seq1  AAAGTCATTCCTCATTGAACAAAGTTTGAACGGCATCAGGGTCCATTTTA  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATTCCTCATTGAACAAAGTTTGAACGGCATCAGGGTCCATTTTA  399

seq1  TTTTAACTGACATTTCGGAAACTGCCTTAATAGTATCTTATTTATTCGGA  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTGACATTTCGGAAACTGCCTTAATAGTATCTTATTTATTCGGA  449

seq1  ATTGAATTTTAATCTTAGCTCTGTCACTTACGAAATATGCTTCTGACCAG  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATTTTAATCTTAGCTCTGTCACTTACGAAATATGCTTCTGACCAG  499

seq1  GCCTTGATGTCCCCACACACATGCCCAATGGCACTACCACATCCTATTTG  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGATGTCCCCACACACATGCCCAATGGCACTACCACATCCTATTTG  549

seq1  TGGTATCCTTGCATGTTAACTGGGATGTCTCCATCAGACGTCAAATGCTC  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCCTTGCATGTTAACTGGGATGTCTCCATCAGACGTCAAATGCTC  599

seq1  TTTCCTTGTCACCTTCCTGCCATGTGAGTTGAGCTGATTCTTTTCCCTCT  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGTCACCTTCCTGCCATGTGAGTTGAGCTGATTCTTTTCCCTCT  649

seq1  TTCACCAGTGACTGCCATCCATCTGTTAATTGGCAAAGCACTTAGAAATG  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCAGTGACTGCCATCCATCTGTTAATTGGCAAAGCACTTAGAAATG  699

seq1  AGCTCACAGCTGCATGTACAAAATTTTCTTTGATGCAATAAGAGTCATGT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACAGCTGCATGTACAAAATTTTCTTTGATGCAATAAGAGTCATGT  749

seq1  GAGGAATTAAGACACCTTGCTCAAAGGCACCTTAAGCACAGGTGCAAGTT  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATTAAGACACCTTGCTCAAAGGCACCTTAAGCACAGGTGCAAGTT  799

seq1  TTTATACATTTCAGTTGTATCTCAAATCAACCAGCAGCCAGCTTTAAGGG  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACATTTCAGTTGTATCTCAAATCAACCAGCAGCCAGCTTTAAGGG  849

seq1  CTATCTGTAGCCAAAAGCCAGTTCCCCATAGGATCCTGAAGAACAAGGTT  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGTAGCCAAAAGCCAGTTCCCCATAGGATCCTGAAGAACAAGGTT  899

seq1  GTTAACAAGGGCTCATGCATCCCCACCAGACTGATCCCTAATTCAGGTTA  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACAAGGGCTCATGCATCCCCACCAGACTGATCCCTAATTCAGGTTA  949

seq1  GGGCAGTGACTGTGAACGGGTGCTTCTGTCTAAGTACACCACTGTGAATT  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTGACTGTGAACGGGTGCTTCTGTCTAAGTACACCACTGTGAATT  999

seq1  C  983
      |
seq2  C  1000