BAC Information

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BAC

Clone NameB6Ng01-020E04
Chromosome14 (Build37)
Map Location 97,749,065 - 97,750,119
singlet/doubletsinglet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020E04.bB6Ng01-020E04.g
ACCDH853111DH853112
length1,2471,047
definitionDH853111|Mus musculus domesticus DNA, BAC clone: B6Ng01-020E04, 5' end.DH853112|Mus musculus domesticus DNA, BAC clone: B6Ng01-020E04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagttctataccccattttttgtgtgggctgtttgggt
tttgggtggttatcttctttagttctttatatattttggatattagccct
ctaagtgatgtggggttagtgaagatttttcctaatctgtaggttgcaga
tttgtcttgtgtatgtcttttgccttacaaaaactttccagtttcatgtg
gtcccatttatcaattcttgatcttagagtgtgagcaattggaattctgt
ttaggaaattttcccctgtgccaatgaattcaaggctctttcccactgtc
tcttctcttagattcagtatatctgattttgtctagaggtccttgatcta
cttagacctgagctttgtgcaagctgaaaaacatgcatctattttcgttt
ttctacataccatttctgaagatgctttcttttttttcattgaatatttt
tggcttcttgtcaaatataaagtgtaagtgtgtggttttatttctgggtc
atcaattttatttgatcaacacgtctgtctctgtaaccaataccatgcag
tttttatcactattactctagtagaatttgaggtcagggatgatgatgcc
ccaggtgttcttttattgttaagaattgttttcactattctgtttttttt
tcttttccagatgaatttgaaaattgctttttctatgtctttgaagaatt
gtgttgtgattttgatgggattgcattgaatctgtagattgtctttggta
caatggctattctgaagagatcttacactagcaacttaacagcacacctg
agtgctctagaacaaaaagtaaactcacccaagaggagtagacagcagga
aatagtcaaactcatggcagaaatcacccaatagaaacaaagagacatat
aaagatcaacaaaccagagactggtagatatcccctagccaatgtattaa
aggtcagaggcagtatccaagtacaaatcagaatgaaaaggagacttaac
accgaacaacgaaatctgaaatctcgatcctaatcaatggtctatcccac
aaactgaaatttaatgaatggatggcttcttgaagatacccattcagtga
atcaggagtgaacgtctaaccattcattcctagaataagtcttaaattct
cacacacaccacaaaatcccgactgatagatttggattcgacttgaactc
tcatcttccttctaaatatcaagagtcctgttcttatgactcatctc
gaattcatcaggtcatgtccctgtaaactgagcgttgataaggctctcct
caagctcagtccctccttcctccaggcattacgtcatgctcacagggacc
tatctgactaggaagctagcaggctgacccttgaaaaccacaacactctc
acccaccatagaaagtcttaaagtgtcttctcagagaggcatccttagga
ggaaataatggagttggccaaattaaggtcttccctaaatcaccttgatt
tatttaaaataaatgtagagaataattgccaataaaagaaaagaaatatt
ctttaaatataggacagagaaatgaagaaaagatgaatagatatgaaata
gaattgtgcataggtttcgaacaatagggggataggaaaaactgtggcac
taatgaggtctaggcagtaagacccatgcacagattgtatagggagagtg
agttgtgatggggaatctggctcctgatagacagatgaggatggtttttt
agtttcagagatggtgtactgagaatggtaaggaaagaatgatccttgag
gcttatacagactggtaaatgatgagaagtgagaacaggagtagagtttt
cccatactatggagtaactatggaaggagggaggcaagatttagcttttg
gttgggcagaattgggagaggacaaagaatgtatttgaccaagagcagag
ggagaggaaaagttttacattaggtagtattctaacataggggtggggca
gggagatatccgtacagatgaatgaaagcaataccactgatcatacacag
tagtgaactgcagtctaggaggtgatgagtccaccaggagatatgccagg
gacaatatgcctactgatatggctgaacaggtactttctccacttcttag
gctcctctgtgatatgtgacctggggacctgcagctgctgcttcactcaa
gttaggagacaaccctaaagacccatgggagcacttgctgatggaggaag
taagccagcagggagtttgggaaataatgctgtaggaggaaggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97749065_97750119
seq2: B6Ng01-020E04.g_66_1112 (reverse)

seq1  CCCACCCTCCTCCTACAGCCATACTTTTCCCAAAACTCCCTGCTGGGCCT  50
      |||||| ||||||||||||  ||  |||||| |||||||||||| ||| |
seq2  CCCACCTTCCTCCTACAGCATTA--TTTCCC-AAACTCCCTGCT-GGCTT  46

seq1  ACTTCCTCCATCAGCAAGTGCTCCCATGGGTCTTTAGGGTTGTCTCCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTTCCTCCATCAGCAAGTGCTCCCATGGGTCTTTAGGGTTGTCT-CCTA  95

seq1  ACTTGAGTGGAAGCAGCAGCTGCAGGTCCCCAGGTCACATATCACAGAGG  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGT-GAAGCAGCAGCTGCAGGTCCCCAGGTCACATATCACAGAGG  144

seq1  AGCCTTAAGAAGTGGAGAAAGTACCTGTTCAGCCATATCAGTAGGCATAT  200
      |||| |||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGCC-TAAGAAGTGGAGAAAGTACCTGTTCAGCCATATCAGTAGGCATA-  192

seq1  TTGTCCCTGGCATATCTCCTGGTGGACTCATCACCTCCTAGACTGCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCTGGCATATCTCCTGGTGGACTCATCACCTCCTAGACTGCAGTT  242

seq1  CACTACTGTGTATGATCAGTGGTATTGCTTTCATTCATCTGTACGGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTGTGTATGATCAGTGGTATTGCTTTCATTCATCTGTACGGATAT  292

seq1  CTCCCTGCCCCACCCCTATGTTAGAATACTACCTAATGTAAAACTTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGCCCCACCCCTATGTTAGAATACTACCTAATGTAAAACTTTTCC  342

seq1  TCTCCCTCTGCTCTTGGTCAAATACATTCTTTGTCCTCTCCCAATTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTGCTCTTGGTCAAATACATTCTTTGTCCTCTCCCAATTCTGC  392

seq1  CCAACCAAAAGCTAAATCTTGCCTCCCTCCTTCCATAGTTACTCCATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAAAAGCTAAATCTTGCCTCCCTCCTTCCATAGTTACTCCATAGT  442

seq1  ATGGGAAAACTCTACTCCTGTTCTCACTTCTCATCATTTACCAGTCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAAACTCTACTCCTGTTCTCACTTCTCATCATTTACCAGTCTGTA  492

seq1  TAAGCCTCAAGGATCATTCTTTCCTTACCATTCTCAGTACACCATCTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTCAAGGATCATTCTTTCCTTACCATTCTCAGTACACCATCTCTG  542

seq1  AAACTAAAAAACCATCCTCATCTGTCTATCAGGAGCCAGATTCCCCATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAAAAACCATCCTCATCTGTCTATCAGGAGCCAGATTCCCCATCA  592

seq1  CAACTCACTCTCCCTATACAATCTGTGCATGGGTCTTACTGCCTAGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCACTCTCCCTATACAATCTGTGCATGGGTCTTACTGCCTAGACCT  642

seq1  CATTAGTGCCACAGTTTTTCCTATCCCCCTATTGTTCGAAACCTATGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTGCCACAGTTTTTCCTATCCCCCTATTGTTCGAAACCTATGCAC  692

seq1  AATTCTATTTCATATCTATTCATCTTTTCTTCATTTCTCTGTCCTATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTATTTCATATCTATTCATCTTTTCTTCATTTCTCTGTCCTATATT  742

seq1  TAAAGAATATTTCTTTTCTTTTATTGGCAATTATTCTCTACATTTATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATATTTCTTTTCTTTTATTGGCAATTATTCTCTACATTTATTTT  792

seq1  AAATAAATCAAGGTGATTTAGGGAAGACCTTAATTTGGCCAACTCCATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATCAAGGTGATTTAGGGAAGACCTTAATTTGGCCAACTCCATTA  842

seq1  TTTCCTCCTAAGGATGCCTCTCTGAGAAGACACTTTAAGACTTTCTATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCTAAGGATGCCTCTCTGAGAAGACACTTTAAGACTTTCTATGG  892

seq1  TGGGTGAGAGTGTTGTGGTTTTCAAGGGTCAGCCTGCTAGCTTCCTAGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGAGAGTGTTGTGGTTTTCAAGGGTCAGCCTGCTAGCTTCCTAGTC  942

seq1  AGATAGGTCCCTGTGAGCATGACGTAATGCCTGGAGGAAGGAGGGACTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGTCCCTGTGAGCATGACGTAATGCCTGGAGGAAGGAGGGACTGA  992

seq1  GCTTGAGGAGAGCCTTATCAACGCTCAGTTTACAGGGACATGACCTGATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGGAGAGCCTTATCAACGCTCAGTTTACAGGGACATGACCTGATG  1042

seq1  AATTC  1055
      |||||
seq2  AATTC  1047