BAC Information

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BAC

Clone NameB6Ng01-020E07
Chromosome14 (Build37)
Map Location 66,440,097 - 66,600,790
singlet/doubletdoublet
Overlap geneEsco2, Ccdc25, Scara3, Clu
Upstream geneHmbox1, LOC100043657, D14Ertd231e, Extl3, Fzd3, LOC668286, Fbxo16, Zfp395, Pnoc, Elp3, Gm600, Scara5, Pbk
Downstream geneGulo, Adam2, LOC100043675, Ephx2, Chrna2, Ptk2b, LOC100043676, Trim35, Stmn4, Adra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020E07.bB6Ng01-020E07.g
ACCDH853117DH853118
length8941,025
definitionDH853117|Mus musculus domesticus DNA, BAC clone: B6Ng01-020E07, 5' end.DH853118|Mus musculus domesticus DNA, BAC clone: B6Ng01-020E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,440,097 - 66,440,995)(66,599,745 - 66,600,790)
sequence
gaattccaggacagccaggggtatacagagaaaccctgtctcaaaagaca
gacagagaaagagagagggagggaggaggaggaaggaaggaaggaagaaa
aaaaaaaggcaagaggaaaagaatgaaggaattacacttaagtttagcat
ggaatgtatatcaagtatttccttctaatgttaacatctgccttagtctg
acttttacagtatttataaaaaagtattttagtaaaattctgttttgctc
gtgagccaaggaaggttctggaaaagctaacaagtcattgtacaaggtct
aaagcttttctgtctccttacctgacagtgtcaaccagtcgtcttgcaat
gcgcttccttctttttagtctgaagacccagattctacttattccacaaa
ttgcaggttctggtacatctgaacaccgccaagctctagaacattcttta
ctggcacttggttctgacaggacccgaaaggcctgcaatgacacatagac
gagctgacttttcttttaaaaagcaaacaaaaatccaaactttaaacaaa
gcctgattatagttaatctataaaaaataatgctctgttactccttaaat
catatttatgatatgagtgttctttctgcatgtatgtatgtgcaggttgt
gcttgatttctgcagaggttagagaaggtactatatcccctacaactaat
ggtcatgaaccccaggttgaaattaaactagaatcctttagcacaagaaa
ggatacaacatggggaaatgacatcttaggagaaaatatctatatttgca
tacgtcagaaggttgagtctaaatttacaatgaactcattgaatagcaaa
aaaataacccaaattttaaattggaacaatatccataagatggt
gaattcacctccgtggctcattggaacatacctctctcaaagctgaaggt
gccccaattgtcatgagtactctacagtgtatggagacccctatatagtc
tcagctgttcatttttatatgcatgacctcgtgtcgctctttggtctctt
tctacccatgtgttctgagacaagatctctcactggaacctgaggctcac
cgaacaccagcaagttcctctttcctctgttctgatagcgccgaggttaa
attacaagagggtgccaccatgcctgacttttccaaactcatgttcgtgt
ggcaagtgctttagcaactgacccggctattatccttgtttcccctccat
accaaaccaagatgtgcagcctgcaggaggattaaataaaaaacagaccc
aagggacacgtatcgcaaggcggcttttattggattagttgcgtggggga
atcagttcttcccgagagcagcaagtgcaggcattagtgtacagaatcca
gaggaagggcaggctgcttgggtgaggcctactcgcctggagacatgtgg
agttctctaggggtctgcagccacctcggggagctgggagattccctccc
agacactcctacatataggaaggtgatgcttctatctcattccgcacttg
aaaaaaaaaaagaggagagtggataagagaatcagtatcccccaagaagc
agccgccaacacccacatccttaaccatcaaggaaaaacatttcccagag
caaagaaagtaaaatccccggggttttcctagcttccccgtgggctctgg
cctcagggataggccacgtgcccagaatgcatagtctgttccttgtctgg
actcctgaggactttccaggcctcagggtctgtttacagtccctggggtc
aaagaaggctgcccgctacgctttcctgcggtatccttagcgtcttcttc
gcactgggtcatacttaggtatcttagagacttcttctgtacaccactgt
gatgggtcagagtcaacagcttcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_66440097_66440995
seq2: B6Ng01-020E07.b_47_940

seq1  GAATTCCAGGACAGCCAGGGGTATACAGAGAAACCCTGTCTCAAAAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGGTATACAGAGAAACCCTGTCTCAAAAGACA  50

seq1  GACAGAGAAAGAGAGAGGGAGGGAGGAGGAGGAAGGAAGGAAGGAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGAAAGAGAGAGGGAGGGAGGAGGAGGAAGGAAGGAAGGAAGAAA  100

seq1  AAAAAAAGGCAAGAGGAAAAGAATGAAGGAATTACACTTAAGTTTAGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGGCAAGAGGAAAAGAATGAAGGAATTACACTTAAGTTTAGCAT  150

seq1  GGAATGTATATCAAGTATTTCCTTCTAATGTTAACATCTGCCTTAGTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTATATCAAGTATTTCCTTCTAATGTTAACATCTGCCTTAGTCTG  200

seq1  ACTTTTACAGTATTTATAAAAAAGTATTTTAGTAAAATTCTGTTTTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTACAGTATTTATAAAAAAGTATTTTAGTAAAATTCTGTTTTGCTC  250

seq1  GTGAGCCAAGGAAGGTTCTGGAAAAGCTAACAAGTCATTGTACAAGGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCAAGGAAGGTTCTGGAAAAGCTAACAAGTCATTGTACAAGGTCT  300

seq1  AAAGCTTTTCTGTCTCCTTACCTGACAGTGTCAACCAGTCGTCTTGCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTTCTGTCTCCTTACCTGACAGTGTCAACCAGTCGTCTTGCAAT  350

seq1  GCGCTTCCTTCTTTTTAGTCTGAAGACCCAGATTCTACTTATTCCACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTTCCTTCTTTTTAGTCTGAAGACCCAGATTCTACTTATTCCACAAA  400

seq1  TTGCAGGTTCTGGTACATCTGAACACCGCCAAGCTCTAGAACATTCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGTTCTGGTACATCTGAACACCGCCAAGCTCTAGAACATTCTTTA  450

seq1  CTGGCACTTGGTTCTGACAGGACCCGAAAGGCCTGCAATGACACATAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACTTGGTTCTGACAGGACCCGAAAGGCCTGCAATGACACATAGAC  500

seq1  GAGCTGACTTTTCTTTTAAAAAGCAAACAAAAATCCAAACTTTAAACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGACTTTTCTTTTAAAAAGCAAACAAAAATCCAAACTTTAAACAAA  550

seq1  GCCTGATTATAGTTAATCTATAAAAAATAATGCTCTGTTACTCCTTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGATTATAGTTAATCTATAAAAAATAATGCTCTGTTACTCCTTAAAT  600

seq1  CATATTTATGATATGAGTGTTCTTTCTGCATGTATGTATGTGCAGGTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTATGATATGAGTGTTCTTTCTGCATGTATGTATGTGCAGGTTGT  650

seq1  GCTTGATTTCTGCAGAGGTTAGAGAAGGTACTAGATCCCCTACAACTAAT  700
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCTTGATTTCTGCAGAGGTTAGAGAAGGTACTATATCCCCTACAACTAAT  700

seq1  GGTCATGAACCCCAGGTTGAAATTAAACTAGAAACCTTCAGCACAAGAAA  750
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  GGTCATGAACCCCAGGTTGAAATTAAACTAGAATCCTTTAGCACAAGAAA  750

seq1  GGATACAACATGGGGAAA-GACAACTTAGGAGAAAATATCTATAATTTGC  799
      |||||||||||||||||| |||| ||||||||||||||||||| ||||||
seq2  GGATACAACATGGGGAAATGACATCTTAGGAGAAAATATCTAT-ATTTGC  799

seq1  ATACGTCAGAAGGTTAGAGTCTAAAATATACAAGGAACTCAACTGAATAG  849
      ||||||||||||||| |||||| |||| ||||| |||||| | |||||||
seq2  ATACGTCAGAAGGTT-GAGTCT-AAATTTACAATGAACTC-ATTGAATAG  846

seq1  CAAAAAAATAACCCAAATTTTAAAATGGAACAATAGTCCAGCAAGATGGT  899
      |||||||||||||||||||||||| |||||||||| ||||  ||||||||
seq2  CAAAAAAATAACCCAAATTTTAAATTGGAACAATA-TCCA-TAAGATGGT  894

seq1: chr14_66599745_66600790
seq2: B6Ng01-020E07.g_68_1092 (reverse)

seq1  GTGAAGCTGTTTGACTCTGACCCCATCACAGTGGTGTTACCAGAAGAAGT  50
      ||||||||| |||||||||| ||||||||||||||||   ||||||||||
seq2  GTGAAGCTG-TTGACTCTGA-CCCATCACAGTGGTGT--ACAGAAGAAGT  46

seq1  CTCTAAGGATAACCCTAAGTTTATGGACACAGTGGCGGAGAAGGCGCTAC  100
      |||||| ||||  ||||||| |   ||| |||| ||| ||||| ||||| 
seq2  CTCTAA-GATA--CCTAAGTAT---GACCCAGT-GCGAAGAAGACGCTA-  88

seq1  AGGAATACCGCAGGAAAAGCCGGTAAGCGGGCAGCCTTTCTGTGACCCCA  150
      ||| |||||||||| |||||  || ||||||||||| |||| ||||||||
seq2  AGG-ATACCGCAGG-AAAGC--GT-AGCGGGCAGCC-TTCTTTGACCCCA  132

seq1  GGGACTGGTAAACAAGACCCTGGAGGCCTGGAAAGTCCTCAGGAGTCCAG  200
      |||||| |||||| ||||||| ||||||||||||||||||||||||||||
seq2  GGGACT-GTAAAC-AGACCCT-GAGGCCTGGAAAGTCCTCAGGAGTCCAG  179

seq1  ACAAGGAACAGACTATGCATTCTGGGCACGTGGCCTATCCCTGAGGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAACAGACTATGCATTCTGGGCACGTGGCCTATCCCTGAGGCCAG  229

seq1  AGCCCACGGGGAAGCTAGGAAAACCCCGGGGATTTTACTTTCTTTGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACGGGGAAGCTAGGAAAACCCCGGGGATTTTACTTTCTTTGCTCT  279

seq1  GGGAAATGTTTTTCCTTGATGGTTAAGGATGTGGGTGTTGGCGGCTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATGTTTTTCCTTGATGGTTAAGGATGTGGGTGTTGGCGGCTGCTT  329

seq1  CTTGGGGGATACTGATTCTCTTATCCACTCTCCTCTTTTTTTTTTTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGGATACTGATTCTCTTATCCACTCTCCTCTTTTTTTTTTTCAAG  379

seq1  TGCGGAATGAGATAGAAGCATCACCTTCCTATATGTAGGAGTGTCTGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGAATGAGATAGAAGCATCACCTTCCTATATGTAGGAGTGTCTGGGA  429

seq1  GGGAATCTCCCAGCTCCCCGAGGTGGCTGCAGACCCCTAGAGAACTCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATCTCCCAGCTCCCCGAGGTGGCTGCAGACCCCTAGAGAACTCCAC  479

seq1  ATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGA  529

seq1  TTCTGTACACTAATGCCTGCACTTGCTGCTCTCGGGAAGAACTGATTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTACACTAATGCCTGCACTTGCTGCTCTCGGGAAGAACTGATTCCC  579

seq1  CCACGCAACTAATCCAATAAAAGCCGCCTTGCGATACGTGTCCCTTGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCAACTAATCCAATAAAAGCCGCCTTGCGATACGTGTCCCTTGGGT  629

seq1  CTGTTTTTTATTTAATCCTCCTGCAGGCTGCACATCTTGGTTTGGTATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTTATTTAATCCTCCTGCAGGCTGCACATCTTGGTTTGGTATGG  679

seq1  AGGGGAAACAAGGATAATAGCCGGGTCAGTTGCTAAAGCACTTGCCACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAACAAGGATAATAGCCGGGTCAGTTGCTAAAGCACTTGCCACAC  729

seq1  GAACATGAGTTTGGAAAAGTCAGGCATGGTGGCACCCTCTTGTAATTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGAGTTTGGAAAAGTCAGGCATGGTGGCACCCTCTTGTAATTTAA  779

seq1  CCTCGGCGCTATCAGAACAGAGGAAAGAGGAACTTGCTGGTGTTCGGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGCGCTATCAGAACAGAGGAAAGAGGAACTTGCTGGTGTTCGGTGA  829

seq1  GCCTCAGGTTCCAGTGAGAGATCTTGTCTCAGAACACATGGGTAGAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGTTCCAGTGAGAGATCTTGTCTCAGAACACATGGGTAGAAAGA  879

seq1  GACCAAAGAGCGACACGAGGTCATGCATATAAAAATGAACAGCTGAGACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAAGAGCGACACGAGGTCATGCATATAAAAATGAACAGCTGAGACT  929

seq1  ATATAGGGGTCTCCATACACTGTAGAGTACTCATGACAATTGGGGCACCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGGGTCTCCATACACTGTAGAGTACTCATGACAATTGGGGCACCT  979

seq1  TCAGCTTTGAGAGAGGTATGTTCCAATGAGCCACGGAGGTGAATTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTGAGAGAGGTATGTTCCAATGAGCCACGGAGGTGAATTC  1025