BAC Information

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BAC

Clone NameB6Ng01-020F19
Chromosome14 (Build37)
Map Location 31,881,482 - 32,059,713
singlet/doubletdoublet
Overlap genePbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7
Upstream geneCacna1d, LOC665399, Dcp1a, Tkt, Prkcd, EG665466, Rft1, Sfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3
Downstream geneBap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd, Ankrd28, Galntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020F19.bB6Ng01-020F19.g
ACCDH853183DH853184
length1,102839
definitionDH853183|Mus musculus domesticus DNA, BAC clone: B6Ng01-020F19, 5' end.DH853184|Mus musculus domesticus DNA, BAC clone: B6Ng01-020F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,881,482 - 31,882,589)(32,058,880 - 32,059,713)
sequence
gaattcttggtaggcaaaacatatgctccccccaccccttttacagtgtt
ggaggggtcaaaacttataaagagggagttgaacggtggtcacctttaac
cccatcattcaggaggcagaggcagatagatctcttgagttcaaggacag
cctggtctacagagcaagttccaggacagccaagaccacacagagaaact
gtctacaaaaaacaaacaacaacaacaacaaacttgtaaagagcactact
gagttgtcatcataagtgccggtgagaggggcaggactgaagctcttgca
taatgcagaaacctaaaatgcagcctttcgcagaagatgtcttttaaagg
atcaataatacagtctgtaataaaactaaaagtaggattttttttttctt
tgaaaattagtcttaagaatgttttaaatgaattagagagcttggagtta
ttctttgaggatagactggtctaaatccattcacttttttaaaaacttgc
ttatttttattttatgtgtactgagatggtgtgcctgtatgtatgtctat
gcagcacatatatccagtgcccacagtggccagaaaagggagttagtttc
tttgggactagagttacagatggttgttacccaccatgtgggtgcagtaa
attgaacctgggtcctctggaagaacaccagtgctccttctcagccccct
caatctctatttcagttacttaataaggccttttgtttttttatctcatt
tatcaattttaagagcatagtgtaggactataaatggtttaaaagaataa
atttaatttactaaattccttcagctttttagcctgcgtatctttggcac
ttactgggaagaatacccagtgtaatccagcattcgcagtataagttctt
ttatgctcttacaggcacttggttaaattgaacttacagatagtaatcct
gcctcttctgaagtactgagagctagaactttagactgtttattgcatct
agagaatcttttgctcttgaccgtgaatggaaaagtaaatataatgattg
ctttcctagcgacacttttgtaaatatcatggtaagccctcggaagatca
tc
gaattctttactgccaccctttaaggaaatctcccttcctgcttggcctg
tctccctctctctagtttgcctgcaggagcctgacctgaccatgggtcct
aattacacatgtcagctcctctctcctgcctcctctaatctctttcccac
tgtggactcagagattccattaagcctagctcacatatggtgctgaaatg
attcccggccccaccaaaaaaaaaattgcttgatatgctgaagtttcttt
tcagcagttggtagacagacatttgatttgtttcagtttggtggactttt
gtgactaaacctaagaacatttacatgcagctctttctgtgacatgcatt
cctccttctcttgggcagatgcccaggagtgggattgctgggtccatgtg
agtagacatgtatgtgaagctgccaagtcacctttccaaggttgctggac
cagttcacacagccattagcaatgtgtgagagttccagctgacagctctt
taccaagtcttggtattgtccatccttttcatttcagcctaacattgtgt
tgtgctcttaatttgcactttgtttgaggagtaaagatgttgagcttttc
atgtgtttaattttctattttttaaatacttccacataatttttatttta
atttgtatgagtatttttcttttgttaaaagaaatgagattctgatctaa
gcattgtggtgaatgcctttaatcccagcacctaggagacagaggcagac
atatctctgtgagttcaaggccagcctggtcttatagtgagttccaggac
agccagtgctacccagagaaaccctgtctcaaatggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_31881482_31882589
seq2: B6Ng01-020F19.b_45_1146

seq1  GAATTCTTGGTAGGCAAAACATATGCTCCCCCCACCCCTTTTACAGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGTAGGCAAAACATATGCTCCCCCCACCCCTTTTACAGTGTT  50

seq1  GGAGGGGTCAAAACTTATAAAGAGGGAGTTGAACGGTGGTCACCTTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGTCAAAACTTATAAAGAGGGAGTTGAACGGTGGTCACCTTTAAC  100

seq1  CCCATCATTCAGGAGGCAGAGGCAGATAGATCTCTTGAGTTCAAGGACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCATTCAGGAGGCAGAGGCAGATAGATCTCTTGAGTTCAAGGACAG  150

seq1  CCTGGTCTACAGAGCAAGTTCCAGGACAGCCAAGACCACACAGAGAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTACAGAGCAAGTTCCAGGACAGCCAAGACCACACAGAGAAACT  200

seq1  GTCTACAAAAAACAAACAACAACAACAACAAACTTGTAAAGAGCACTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACAAAAAACAAACAACAACAACAACAAACTTGTAAAGAGCACTACT  250

seq1  GAGTTGTCATCATAAGTGCCGGTGAGAGGGGCAGGACTGAAGCTCTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTCATCATAAGTGCCGGTGAGAGGGGCAGGACTGAAGCTCTTGCA  300

seq1  TAATGCAGAAACCTAAAATGCAGCCTTTCGCAGAAGATGTCTTTTAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCAGAAACCTAAAATGCAGCCTTTCGCAGAAGATGTCTTTTAAAGG  350

seq1  ATCAATAATACAGTCTGTAATAAAACTAAAAGTAGGATTTTTTTTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAATACAGTCTGTAATAAAACTAAAAGTAGGATTTTTTTTTTCTT  400

seq1  TGAAAATTAGTCTTAAGAATGTTTTAAATGAATTAGAGAGCTTGGAGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTAGTCTTAAGAATGTTTTAAATGAATTAGAGAGCTTGGAGTTA  450

seq1  TTCTTTGAGGATAGACTGGTCTAAATCCATTCACTTTTTTAAAAACTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGAGGATAGACTGGTCTAAATCCATTCACTTTTTTAAAAACTTGC  500

seq1  TTATTTTTATTTTATGTGTACTGAGATGGTGTGCCTGTATGTATGTCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTATTTTATGTGTACTGAGATGGTGTGCCTGTATGTATGTCTAT  550

seq1  GCAGCACATATATCCAGTGCCCACAGTGGCCAGAAAAGGGAGTTAGTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACATATATCCAGTGCCCACAGTGGCCAGAAAAGGGAGTTAGTTTC  600

seq1  TTTGGGACTAGAGTTACAGATGGTTGTTACCCACCATGTGGGTGCAGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGACTAGAGTTACAGATGGTTGTTACCCACCATGTGGGTGCAGTAA  650

seq1  ATTGAACCTGGGTCCTCTGGAAGAACACCAGTGCTCCTTCTCAGCCCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACCTGGGTCCTCTGGAAGAACACCAGTGCTCCTTCTCAGCCCCCT  700

seq1  CAATCTCTATTTCAGTTACTTAATAAGGCCTTTTGTTTTTTTATCTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCTATTTCAGTTACTTAATAAGGCCTTTTGTTTTTTTATCTCATT  750

seq1  TATCAA-TTTAAGAGCATAGTGTAGGACTATAAATGGTTTAAAAGAATAA  799
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATTTTAAGAGCATAGTGTAGGACTATAAATGGTTTAAAAGAATAA  800

seq1  ATTTAATTTACTAAAATTCCTTCAGCTTTTTAGCCTGCGTATCTTTGGCA  849
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTTACT-AAATTCCTTCAGCTTTTTAGCCTGCGTATCTTTGGCA  849

seq1  CTTACT-GGAAGAATACCCAGTGTAATCCAGCAATCGCAGTATAAGTTC-  897
      |||||| |||||||||||||||||||||||||| ||||||||||||||| 
seq2  CTTACTGGGAAGAATACCCAGTGTAATCCAGCATTCGCAGTATAAGTTCT  899

seq1  TATATGCTCTTACAGGCACTTGGTTAAATTGAACTTACAGATAGTAAATC  947
      | ||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTATGCTCTTACAGGCACTTGGTTAAATTGAACTTACAGATAGT-AATC  948

seq1  CTGCCCTCTTCTGAAGTACTGAGAGCTAGAACTTTAGACTGTTTAATTGC  997
      ||| |||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTG-CCTCTTCTGAAGTACTGAGAGCTAGAACTTTAGACTGTTT-ATTGC  996

seq1  ATCTAGGAGATC-TTTGCTCTAGACCGTGAA-GGAAAAGTAAATATTAAT  1045
      ||||||   ||| |||||||| ||||||||| ||||||||||||| ||||
seq2  ATCTAGAGAATCTTTTGCTCTTGACCGTGAATGGAAAAGTAAATA-TAAT  1045

seq1  GATTGCTTTTCCTAGTGACAACTTTTGTAAAATATCATGGTAAAGCCCTT  1095
      |||||| |||||||| ||| |||||||| |||||||||||| |||||| |
seq2  GATTGC-TTTCCTAGCGAC-ACTTTTGT-AAATATCATGGT-AAGCCC-T  1090

seq1  CGTGAAGATCATC  1108
      || ||||||||||
seq2  CG-GAAGATCATC  1102

seq1: chr14_32058880_32059713
seq2: B6Ng01-020F19.g_67_905 (reverse)

seq1  GCTCCATTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACT  50
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  GCTCCATTTGAGACAGGGTTTCTCTGGGTAGCACTGGCTGTCCTGGAACT  50

seq1  CACTATAAGACCAGGCTGGCCTTGAACTCACAGAGATTTGTCTGCCTCTG  100
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CACTATAAGACCAGGCTGGCCTTGAACTCACAGAGATATGTCTGCCTCTG  100

seq1  TCTCCTAGGTGCTGGGATTAAAGGCATTCACCACAATGCTTAGATCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAGGTGCTGGGATTAAAGGCATTCACCACAATGCTTAGATCAGAA  150

seq1  TCTCATTTCTTTTAACAAAAG-AAAATACTCATACAAATT-AAATAAAAA  198
      ||||||||||||||||||||| |||||||||||||||||| |||||||||
seq2  TCTCATTTCTTTTAACAAAAGAAAAATACTCATACAAATTAAAATAAAAA  200

seq1  TTATGT-GAAGTATTT-AAAAATAGAAAATTAAACACATGAAAAGCTCAA  246
      |||||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  TTATGTGGAAGTATTTAAAAAATAGAAAATTAAACACATGAAAAGCTCAA  250

seq1  CATCTTTACTCCTCAAAC-AAGTGCAAATTAAGAGCACAACACAATGTTA  295
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CATCTTTACTCCTCAAACAAAGTGCAAATTAAGAGCACAACACAATGTTA  300

seq1  GGCTGAAATGAAAAGGATGGACAATACCAAGACTTGGTAAAGAGCTGTCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAATGAAAAGGATGGACAATACCAAGACTTGGTAAAGAGCTGTCA  350

seq1  GCTGGAACTCTCACACATTGCTAATGGCTGTGTGAACTGGTCCAGCAACC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAACTCTCACACATTGCTAATGGCTGTGTGAACTGGTCCAGCAACC  400

seq1  TTGGAAAGGTGACTTGGCAGCTTCACATACATGTCTACTCACATGGACCC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAGGTGACTTGGCAGCTTCACATACATGTCTACTCACATGGACCC  450

seq1  AGCAATCCCACTCCTGGGCATCTGCCCAAGAGAAGGAGGAATGCATGTCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCCCACTCCTGGGCATCTGCCCAAGAGAAGGAGGAATGCATGTCA  500

seq1  CAGAAAGAGCTGCATGTAAATGTTCTTAGGTTTAGTCACAAAAGTCCACC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAGCTGCATGTAAATGTTCTTAGGTTTAGTCACAAAAGTCCACC  550

seq1  AAACTGAAACAAATCAAATGTCTGTCTACCAACTGCTGAAAAGAAACTTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAACAAATCAAATGTCTGTCTACCAACTGCTGAAAAGAAACTTC  600

seq1  AGCATATCAAGCAATTTTTTTTTTGGTGGGGCCGGGAATCATTTCAGCAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATCAAGCAATTTTTTTTTTGGTGGGGCCGGGAATCATTTCAGCAC  650

seq1  CATATGTGAGCTAGGCTTAATGGAATCTCTGAGTCCACAGTGGGAAAGAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTGAGCTAGGCTTAATGGAATCTCTGAGTCCACAGTGGGAAAGAG  700

seq1  ATTAGAGGAGGCAGGAGAGAGGAGCTGACATGTGTAATTAGGACCCATGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGGAGGCAGGAGAGAGGAGCTGACATGTGTAATTAGGACCCATGG  750

seq1  TCAGGTCAGGCTCCTGCAGGCAAACTAGAGAGAGGGAGACAGGCCAAGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCAGGCTCCTGCAGGCAAACTAGAGAGAGGGAGACAGGCCAAGCA  800

seq1  GGAAGGGAGATTTCCTTAAAGGGTGGCAGTAAAGAATTC  834
      |||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGAGATTTCCTTAAAGGGTGGCAGTAAAGAATTC  839