BAC Information

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BAC

Clone NameB6Ng01-020K15
Chromosome14 (Build37)
Map Location 14,593,604 - 14,723,126
singlet/doubletdoublet
Overlap geneEG382844, LOC100042045, Gm281
Upstream geneCadps, EG432822, LOC100042022, LOC100042026, EG328354, Synpr, A430083B19Rik
Downstream geneThoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020K15.bB6Ng01-020K15.g
ACCDH853399DH853400
length9871,041
definitionDH853399|Mus musculus domesticus DNA, BAC clone: B6Ng01-020K15, 5' end.DH853400|Mus musculus domesticus DNA, BAC clone: B6Ng01-020K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,722,511 - 14,723,126)(14,593,604 - 14,594,647)
sequence
gaattcaaaatgagtatgggctatcaaggttgtgcctcaaaagagaaaaa
gaatgaggcacaggaaatccccaatgaaaacaactccaaacagtcatttg
ctctttaggaattattatatgaagtagaaacgtaagggttctttggaaag
tcagttggatggtgttttgctggggcaaacttgtgaagaatgtttagctg
aagtggacacaggtgaaagactaaggtagtctcatgaaggaacgtttcac
tgaagcagacacagaaggagataggatgttctgctaacgcaggcatgtgg
aaggacacgtgatgaaggagtttttgctaacaacacatgtatttgtccac
cttaccttgtgtagctggactacatttgttggaaccccattgagagaaat
gctcaaaaaacacttctggtgatgtgctgaagtttcttgcttctatgaac
ttgggctgattggcagagtgatggcagctgagacagactcacgagttgag
gcaagacctgtggaggccatgtgatgcttggagggcatatacaaaggact
caatggacagtaacagtggctgagcttggcttgcttatagagctagctgt
gcaacacttgtgggtcttgcatctttcctgatctttgcttccctgagaga
ggtacagctgagaccttctcctggtgttcctcctgtcccctcctgctgac
tcgagctaaggttgatgcctcactgattcttctacgttctgctgctgatt
tgtgtttgccatcccaactctgctgaatgaagtgtttgcaagtggattga
gctgctgctgcctgctaatctgtgaattgaagggccgatttccagacaac
acagatgggagttactccaaagaacctttctaaataggtctactttccca
tattctttcttccccactatgtctggtgggtggtaggctaaatggagtta
aagcatttaagaccatcatcaaagtaggtttgaaaaa
gaattctttccgcagccttatgggctgtcccagtgtttttcactttgcag
agacattagccacaccttcccctctcagactcatgctgtctctgattttc
atggagtcattaaaattaacaggaaggaaattccttgaagaaggaacgta
aaaattatgtacattattattatacaaacaagctttatgcccacagtagc
cattgagacttgtggaagcccacacctgctgaccctgtcccagggcagga
acatgtccttctgtccctgccaaggccatggtagactctgcagtccaagg
tccacatttgttctcaggcacctgcatgccaggcaggaagcagaaagaag
ggtttgggatgaatactgtggtccctgatcttctgggtccctgaattctg
atgatttattccctggagaggaagtcaggtttggatttctgtggcccaga
ttttccctcagggcaattgcacaccaagcaggaaggggaaaagcaatgtc
tgaaacaagcaggatccagtaaggttaggagcaagtgccaagtactggag
gggcggaagaagagaaaggtcttcttccagagtcttaatgtcacagctcg
tttaggtgaagaccttccccatggcagtctttaatgaagtagctctctga
gctgattcttgcaaaagcaagcatcatattgttttattggggatgcatat
ggatgtatatactttatttgtggtgaaccaggaattatatatggggaggg
ggacacaagactacacagaaagggacaatcactggctgaagactaatgta
gatacctcattagcatagagaagaactcccggtgctatgctatgtgactg
agtgccagtggtcctttcagtgtttctcaccatgattgtccagagcaggc
attagagcctgggaggggcactccactcctgccatatcagtcttctgaga
ttcctggtgtttgacactacccacttcacagtgcttatgccatcccaaga
gcatcatctcacattttcctattacccttcttagactggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14722511_14723126
seq2: B6Ng01-020K15.b_45_660 (reverse)

seq1  GACCCACAAGTGTTGCACAGCTAGCTCTATAAGCAAGCCAAGCTCAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACAAGTGTTGCACAGCTAGCTCTATAAGCAAGCCAAGCTCAGCCA  50

seq1  CTGTTACTGTCCATTGAGTCCTTTGTATATGCCCTCCAAGCATCACATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACTGTCCATTGAGTCCTTTGTATATGCCCTCCAAGCATCACATGG  100

seq1  CCTCCACAGGTCTTGCCTCAACTCGTGAGTCTGTCTCAGCTGCCATCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACAGGTCTTGCCTCAACTCGTGAGTCTGTCTCAGCTGCCATCACT  150

seq1  CTGCCAATCAGCCCAAGTTCATAGAAGCAAGAAACTTCAGCACATCACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAATCAGCCCAAGTTCATAGAAGCAAGAAACTTCAGCACATCACCA  200

seq1  GAAGTGTTTTTTGAGCATTTCTCTCAATGGGGTTCCAACAAATGTAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTTTTTTGAGCATTTCTCTCAATGGGGTTCCAACAAATGTAGTCC  250

seq1  AGCTACACAAGGTAAGGTGGACAAATACATGTGTTGTTAGCAAAAACTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACACAAGGTAAGGTGGACAAATACATGTGTTGTTAGCAAAAACTCC  300

seq1  TTCATCACGTGTCCTTCCACATGCCTGCGTTAGCAGAACATCCTATCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCACGTGTCCTTCCACATGCCTGCGTTAGCAGAACATCCTATCTCC  350

seq1  TTCTGTGTCTGCTTCAGTGAAACGTTCCTTCATGAGACTACCTTAGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTCTGCTTCAGTGAAACGTTCCTTCATGAGACTACCTTAGTCTT  400

seq1  TCACCTGTGTCCACTTCAGCTAAACATTCTTCACAAGTTTGCCCCAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTGTCCACTTCAGCTAAACATTCTTCACAAGTTTGCCCCAGCAA  450

seq1  AACACCATCCAACTGACTTTCCAAAGAACCCTTACGTTTCTACTTCATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCATCCAACTGACTTTCCAAAGAACCCTTACGTTTCTACTTCATAT  500

seq1  AATAATTCCTAAAGAGCAAATGACTGTTTGGAGTTGTTTTCATTGGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTCCTAAAGAGCAAATGACTGTTTGGAGTTGTTTTCATTGGGGAT  550

seq1  TTCCTGTGCCTCATTCTTTTTCTCTTTTGAGGCACAACCTTGATAGCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTGCCTCATTCTTTTTCTCTTTTGAGGCACAACCTTGATAGCCCA  600

seq1  TACTCATTTTGAATTC  616
      ||||||||||||||||
seq2  TACTCATTTTGAATTC  616

seq1: chr14_14593604_14594647
seq2: B6Ng01-020K15.g_70_1110

seq1  GAATTCTTTCCGCAGCCTTATGGGCTGTCCCAGTGTTTTTCACTTTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCGCAGCCTTATGGGCTGTCCCAGTGTTTTTCACTTTGCAG  50

seq1  AGACATTAGCCACACCTTCCCCTCTCAGACTCATGCTGTCTCTGATTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTAGCCACACCTTCCCCTCTCAGACTCATGCTGTCTCTGATTTTC  100

seq1  ATGGAGTCATTAAAATTAACAGGAAGGAAATTCCTTGAAGAAGGAACGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTCATTAAAATTAACAGGAAGGAAATTCCTTGAAGAAGGAACGTA  150

seq1  AAAATTATGTACATTATTATTATACAAACAAGCTTTATGCCCACAGTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATGTACATTATTATTATACAAACAAGCTTTATGCCCACAGTAGC  200

seq1  CATTGAGACTTGTGGAAGCCCACACCTGCTGACCCTGTCCCAGGGCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGACTTGTGGAAGCCCACACCTGCTGACCCTGTCCCAGGGCAGGA  250

seq1  ACATGTCCTTCTGTCCCTGCCAAGGCCATGGTAGACTCTGCAGTCCAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCCTTCTGTCCCTGCCAAGGCCATGGTAGACTCTGCAGTCCAAGG  300

seq1  TCCACATTTGTTCTCAGGCACCTGCATGCCAGGCAGGAAGCAGAAAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATTTGTTCTCAGGCACCTGCATGCCAGGCAGGAAGCAGAAAGAAG  350

seq1  GGTTTGGGATGAATACTGTGGTCCCTGATCTTCTGGGTCCCTGAATTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGGATGAATACTGTGGTCCCTGATCTTCTGGGTCCCTGAATTCTG  400

seq1  ATGATTTATTCCCTGGAGAGGAAGTCAGGTTTGGATTTCTGTGGCCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTATTCCCTGGAGAGGAAGTCAGGTTTGGATTTCTGTGGCCCAGA  450

seq1  TTTTCCCTCAGGGCAATTGCACACCAAGCAGGAAGGGGAAAAGCAATGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTCAGGGCAATTGCACACCAAGCAGGAAGGGGAAAAGCAATGTC  500

seq1  TGAAACAAGCAGGATCCAGTAAGGTTAGGAGCAAGTGCCAAGTACTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAAGCAGGATCCAGTAAGGTTAGGAGCAAGTGCCAAGTACTGGAG  550

seq1  GGGCGGAAGAAGAGAAAGGTCTTCTTCCAGAGTCTTAATGTCACAGCTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGGAAGAAGAGAAAGGTCTTCTTCCAGAGTCTTAATGTCACAGCTCG  600

seq1  TTTAGGTGAAGACCTTCCCCATGGCAGTCTTTAATGAAGTAGCTCTCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTGAAGACCTTCCCCATGGCAGTCTTTAATGAAGTAGCTCTCTGA  650

seq1  GCTGATTCTTGCAAAAGCAAGCATCATATTGTTTTATTGGGGATGCATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATTCTTGCAAAAGCAAGCATCATATTGTTTTATTGGGGATGCATAT  700

seq1  GGATGTATATACTTTATTTGTGGTGAACCAGGAATTATATATGGGGAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTATATACTTTATTTGTGGTGAACCAGGAATTATATATGGGGAGGG  750

seq1  GGACACAAGACTACACAGAAAGGGACAATCACTGGCTGAAGACTAATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAAGACTACACAGAAAGGGACAATCACTGGCTGAAGACTAATGTA  800

seq1  GATACCTCATTAGCATAGAGAAGAACTCCCGGTGCTATGCTATGTGACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTCATTAGCATAGAGAAGAACTCCCGGTGCTATGCTATGTGACTG  850

seq1  AGTGCCAGTGGTCCTTTCAGTTGTTTCTCACCATGATTTGTTCCAGAGCA  900
      |||||||||||||||||||| |||||||||||||||||   |||||||||
seq2  AGTGCCAGTGGTCCTTTCAG-TGTTTCTCACCATGATT--GTCCAGAGCA  897

seq1  GGCATTAGAGCCTGGGAGGGGGCAACTCCACTCCTGCCATATCAGATCTC  950
      |||||||||||||||||||||   |||||||||||||||||||||   ||
seq2  GGCATTAGAGCCTGGGAGGGG--CACTCCACTCCTGCCATATCAGTCTTC  945

seq1  TGAGATTCCTGGTGTTTGAGCACTACCCACTTCACCAGTTCTTATGCCCA  1000
      ||||||||||||||||||| |||||||||||||| |||| ||||||||  
seq2  TGAGATTCCTGGTGTTTGA-CACTACCCACTTCA-CAGTGCTTATGCCAT  993

seq1  TCCAAGAGCATCATCCTACA-TTTCCTA-TACACTTCT--GACTGGTT  1044
       ||||||||||||||  ||| ||||||| ||| |||||  ||||||||
seq2  CCCAAGAGCATCATCTCACATTTTCCTATTACCCTTCTTAGACTGGTT  1041