BAC Information

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BAC

Clone NameB6Ng01-021A17
Chromosome14 (Build37)
Map Location 97,962,208 - 98,013,027
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043366, LOC668654
Downstream geneEG668659, Dach1, LOC635593
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021A17.bB6Ng01-021A17.g
ACCDH853665DH853666
length9601,051
definitionDH853665|Mus musculus domesticus DNA, BAC clone: B6Ng01-021A17, 5' end.DH853666|Mus musculus domesticus DNA, BAC clone: B6Ng01-021A17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,012,067 - 98,013,027)(97,962,208 - 97,963,270)
sequence
gaattccggcatctttttttgtcatgtgaagaatgaacatcaaccttcaa
aagttaggctgtgaattgtttgggcaaaatactaattgttaccagcatgg
gcaggtaataatcacgtagcattttaatttccagtcgaaacctaggcact
ttcatgtgccaagcaattcaaattcccttcactgtcaacagaatctgtga
gctggtaagaacatctattgtgtacttcaaaagcgaataaagaatatggc
acaaagttttgctgctagtttgtgtatttctcctgtttgtgatattgtca
aaataaattcttctttagctgttgattctattgatttgtttatcgatcat
aattttttaaagaaatgcttcagaacttttatatttactttattaatttt
cctaaaactttctagtaatggaaacctaaggaaaaattgtttatcttaac
agtttgaaaaaatatatttcaacatcatcaggaaggtttagtggtgaaag
tgtcaggaaatgggacacattccatctgcagtcaatggacatagggaaaa
tgttgatgttcactttgctttcttgttccttttcgttttatccagtttag
gacctcaacccctgggatggaactactcagattcccagagagtcttttct
ccttagttaaatttctctggcagttttctcacagacatctccagaggtat
gttccttaagtgactcaaaatctactcaagttgatagtgaaaactaactg
tcataagtccattatttgtaaattatagaatgtccatactttaaatcaaa
atacacactgctgacttcttatgtcttttgtccatcccataatgaaaata
tatttagtccatctcttggattaaccaaaatcacaatcacaacatcccaa
taatgtcaaagttgaaggaagtcttttatgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtg
gaattcagtataacttggagtcaaaaaacatatttttgaaagctcagcga
aaacaatgtgaaaacaaattagcccattttatctattttgtgtcatcaga
taattaatcttaatcactataaatgtttatcattagccacagactttttt
ttttgacaaacttgtcatacgatgtgattttgatctttatctcatgaatc
actttgtattgtgaaggttctttgtcatttttttgtgactacaattttca
aacataatgaagatattaaataaaaattctcctacattgattattgcttc
actttgcaaggtatttagctcaataaataaccattcatcatcttttccaa
tcagtcttgagtcttgtgacaatttgctcataaagactaactgaaattaa
tcctcagttaatattacatgaaataatttttaaaactcaagcctacctct
gttgatatcgataatttttgtttaactcttatgtataaaatttatttata
aaacttatgtactcaaaaataactgtggttacataataattcataaaata
tattgaatatatatatttatattcaatttttatagatatcttctttaagc
aaggagcttaaagtcagaaaaacatatttttatgctgaacagcttagata
cacaattgtatatactagctttttaagaatgcatctgtataagaaatgtt
ttatgcagagtacttacatcaaaaacaaaagttctcttcttaacacttca
ttgaattttctctaaaattaacaatatacacaaaggacatctcaacagac
acaagaaaattgaaataacccctacatttatttgtctgctatggatcaaa
gcttgatagcaacaataccagaagcaacaggaaacttgaaagctcatgaa
actgaacatctgtctactgaatgaaaatgggtcagagatttagtaagaaa
gatattaaagaattttagagtagatgaatagacacaacgcaaacttagat
gacacatgagattcttagagacagttcatagtgctgtctaccaaacaaca
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_98012067_98013027
seq2: B6Ng01-021A17.b_44_1003 (reverse)

seq1  CACACACACACACACACACACACACACACACATAAAAGACTTCCTTTCAA  50
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CACACACACACACACACACACACACACACACATAAAAGACTTCC-TTCAA  49

seq1  CTTTGACATTATTGGGATGTTGTGATTGTGATTTTGGTTAATCCAAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACATTATTGGGATGTTGTGATTGTGATTTTGGTTAATCCAAGAGA  99

seq1  TGGACTAAATATATTTTCATTATGGGATGGACAAAAGACATAAGAAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTAAATATATTTTCATTATGGGATGGACAAAAGACATAAGAAGTCA  149

seq1  GCAGTGTGTATTTTGATTTAAAGTATGGACATTCTATAATTTACAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTGTATTTTGATTTAAAGTATGGACATTCTATAATTTACAAATAA  199

seq1  TGGACTTATGACAGTTAGTTTTCACTATCAACTTGAGTAGATTTTGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTATGACAGTTAGTTTTCACTATCAACTTGAGTAGATTTTGAGTC  249

seq1  ACTTAAGGAACATACCTCTGGAGATGTCTGTGAGAAAACTGCCAGAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGGAACATACCTCTGGAGATGTCTGTGAGAAAACTGCCAGAGAAA  299

seq1  TTTAACTAAGGAGAAAAGACTCTCTGGGAATCTGAGTAGTTCCATCCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTAAGGAGAAAAGACTCTCTGGGAATCTGAGTAGTTCCATCCCAG  349

seq1  GGGTTGAGGTCCTAAACTGGATAAAACGAAAAGGAACAAGAAAGCAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGAGGTCCTAAACTGGATAAAACGAAAAGGAACAAGAAAGCAAAGT  399

seq1  GAACATCAACATTTTCCCTATGTCCATTGACTGCAGATGGAATGTGTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCAACATTTTCCCTATGTCCATTGACTGCAGATGGAATGTGTCCC  449

seq1  ATTTCCTGACACTTTCACCACTAAACCTTCCTGATGATGTTGAAATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTGACACTTTCACCACTAAACCTTCCTGATGATGTTGAAATATAT  499

seq1  TTTTTCAAACTGTTAAGATAAACAATTTTTCCTTAGGTTTCCATTACTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAACTGTTAAGATAAACAATTTTTCCTTAGGTTTCCATTACTAG  549

seq1  AAAGTTTTAGGAAAATTAATAAAGTAAATATAAAAGTTCTGAAGCATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTTAGGAAAATTAATAAAGTAAATATAAAAGTTCTGAAGCATTTC  599

seq1  TTTAAAAAATTATGATCGATAAACAAATCAATAGAATCAACAGCTAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAATTATGATCGATAAACAAATCAATAGAATCAACAGCTAAAGA  649

seq1  AGAATTTATTTTGACAATATCACAAACAGGAGAAATACACAAACTAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTATTTTGACAATATCACAAACAGGAGAAATACACAAACTAGCAG  699

seq1  CAAAACTTTGTGCCATATTCTTTATTCGCTTTTGAAGTACACAATAGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTTTGTGCCATATTCTTTATTCGCTTTTGAAGTACACAATAGATG  749

seq1  TTCTTACCAGCTCACAGATTCTGTTGACAGTGAAGGGAATTTGAATTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACCAGCTCACAGATTCTGTTGACAGTGAAGGGAATTTGAATTGCT  799

seq1  TGGCACATGAAAGTGCCTAGGTTTCGACTGGAAATTAAAATGCTACGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACATGAAAGTGCCTAGGTTTCGACTGGAAATTAAAATGCTACGTGA  849

seq1  TTATTACCTGCCCATGCTGGTAACAATTAGTATTTTGCCCAAACAATTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACCTGCCCATGCTGGTAACAATTAGTATTTTGCCCAAACAATTCA  899

seq1  CAGCCTAACTTTTGAAGGTTGATGTTCATTCTTCACATGACAAAAAAAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTAACTTTTGAAGGTTGATGTTCATTCTTCACATGACAAAAAAAGA  949

seq1  TGCCGGAATTC  961
      |||||||||||
seq2  TGCCGGAATTC  960

seq1: chr14_97962208_97963270
seq2: B6Ng01-021A17.g_67_1117

seq1  GAATTCAGTATAACTTGGAGTCAAAAAACATATTTTTGAAAGCTCAGCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATAACTTGGAGTCAAAAAACATATTTTTGAAAGCTCAGCGA  50

seq1  AAACAATGTGAAAACAAATTAGCCCATTTTATCTATTTTGTGTCATCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGTGAAAACAAATTAGCCCATTTTATCTATTTTGTGTCATCAGA  100

seq1  TAATTAATCTTAATCACTATAAATGTTTATCATTAGCCACAGACTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATCTTAATCACTATAAATGTTTATCATTAGCCACAGACTTTTTT  150

seq1  TTTTGACAAACTTGTCATACGATGTGATTTTGATCTTTATCTCATGAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACAAACTTGTCATACGATGTGATTTTGATCTTTATCTCATGAATC  200

seq1  ACTTTGTATTGTGAAGGTTCTTTGTCATTTTTTTGTGACTACAATTTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTATTGTGAAGGTTCTTTGTCATTTTTTTGTGACTACAATTTTCA  250

seq1  AACATAATGAAGATATTAAATAAAAATTCTCCTACATTGATTATTGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAATGAAGATATTAAATAAAAATTCTCCTACATTGATTATTGCTTC  300

seq1  ACTTTGCAAGGTATTTAGCTCAATAAATAACCATTCATCATCTTTTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCAAGGTATTTAGCTCAATAAATAACCATTCATCATCTTTTCCAA  350

seq1  TCAGTCTTGAGTCTTGTGACAATTTGCTCATAAAGACTAACTGAAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTGAGTCTTGTGACAATTTGCTCATAAAGACTAACTGAAATTAA  400

seq1  TCCTCAGTTAATATTACATGAAATAATTTTTAAAACTCAAGCCTACCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGTTAATATTACATGAAATAATTTTTAAAACTCAAGCCTACCTCT  450

seq1  GTTGATATCGATAATTTTTGTTTAACTCTTATGTATAAAATTTATTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATATCGATAATTTTTGTTTAACTCTTATGTATAAAATTTATTTATA  500

seq1  AAACTTATGTACTCAAAAATAACTGTGGTTACATAATAATTCATAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTATGTACTCAAAAATAACTGTGGTTACATAATAATTCATAAAATA  550

seq1  TATTGAATATATATATTTATATTCAATTTTTATAGATATCTTCTTTAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAATATATATATTTATATTCAATTTTTATAGATATCTTCTTTAAGC  600

seq1  AAGGAGCTTAAAGTCAGAAAAACATATTTTTATGCTGAACAGCTTAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCTTAAAGTCAGAAAAACATATTTTTATGCTGAACAGCTTAGATA  650

seq1  CACAATTGTATATACTAGCTTTTTAAGAATGCATCTGTATAAGAAATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTGTATATACTAGCTTTTTAAGAATGCATCTGTATAAGAAATGTT  700

seq1  TTATGCAGAGTACTTACATCAAAAACAAAAGTTCTCTTCTTAACACTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCAGAGTACTTACATCAAAAACAAAAGTTCTCTTCTTAACACTTCA  750

seq1  TTGAATTTTCTCTAAAATTAACAATATACACAAAGGACATCTCAACAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTTCTCTAAAATTAACAATATACACAAAGGACATCTCAACAGAC  800

seq1  ACAAGAAAATTGAAATAACCCCTACATTTATTTGTCTGCTATGGATCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAAATTGAAATAACCCCTACATTTATTTGTCTGCTATGGATCAAA  850

seq1  GCTTGATAGCAACAATACCAGAAGCAACAGGAAACTTGAAAGCTCATGAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTTGATAGCAACAATACCAGAAGCAACAGGAAACTTGAAAGCTCATG-A  899

seq1  AACTGAACATCTGTCTACTGAATGAAAAATGGGTCAAGAGATATAGTAAG  950
      |||||||||||||||||||||||| |||||||||| |||||| |||||||
seq2  AACTGAACATCTGTCTACTGAATG-AAAATGGGTC-AGAGATTTAGTAAG  947

seq1  AAAGATATTAAAGAATTTCTAGAGTAGAATGAAATAGACAACAAACGCAA  1000
      |||||||||||||||||| |||||||| ||| ||||||||   |||||||
seq2  AAAGATATTAAAGAATTT-TAGAGTAG-ATG-AATAGACA--CAACGCAA  992

seq1  ACTTAGATGGAACACAATGAAGATTCTTAGAGACAAGTTCATAGTGCTGT  1050
      |||||||||  |||| ||| |||||||||||||| |||||||||||||||
seq2  ACTTAGATG--ACAC-ATG-AGATTCTTAGAGAC-AGTTCATAGTGCTGT  1037

seq1  CTACCAAA-AACAA  1063
      |||||||| |||||
seq2  CTACCAAACAACAA  1051