BAC Information

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BAC

Clone NameB6Ng01-022G11
Chromosome14 (Build37)
Map Location 100,738,519 - 100,888,079
singlet/doubletdoublet
Overlap geneLOC100043413
Upstream geneLOC100043400, LOC100043789, LOC668671, LOC668672, EG546623, Klf12
Downstream geneEG668683, EG668684, 1700110M21Rik, LOC100043421, LOC382936, Tbc1d4
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022G11.bB6Ng01-022G11.g
ACCDH854629DH854630
length1,070515
definitionDH854629|Mus musculus domesticus DNA, BAC clone: B6Ng01-022G11, 5' end.DH854630|Mus musculus domesticus DNA, BAC clone: B6Ng01-022G11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,738,519 - 100,739,595)(100,887,559 - 100,888,079)
sequence
gaattcttgggcaaatggatgaatctggaggatatcatcctgagtgaggt
caatcacaagagatgtcacttgatatgcactcactgataagtggatatta
acccagaaacctagaatacccaagatacaatttttaaaacacaagtaatt
ctagaaggaagaccaacatggggctacttcattgctctctagaataggga
ataaaatatccatggaaggagttgcagagacaaaatttggagctaagacg
aaaggatggaccaaactcagggtttttataagagaaagtgttcttcagtg
ctaagccatctctcctatctgtcaatttgacttaatctcaaaaaagtaag
tttaaggtgattatgcatgaatagccagttgcttgccattctcatcatgt
cttctctgtctactctgcatataggaaaggtctctagaccttgacttttt
cttttcctttgacatagtaaaaatctagggtgccagcttgaaccattgga
tccaaccctccatccattcctttcaaaggctatagattctgtgacccata
acttattgtgaagcaaaagagagaggcaaggaagtctcatgcccatagca
agaaccccttgaacagctgcaggggctgagaaatatcccgtaacagagtt
aaataaaagcatgtggtgtgtaactcatagatgtaatatgactggttgac
ttgttccttaggagagaaggttgagtttctgacaatgctagtgtgacaag
gaaggtgttgttactgactactgccaatttagaatgccaacattatatct
tacttgtgttcctttaagtatgaaacatgatgtagaaatgaaacgattaa
aataaatggtgccatcagttccctgggagatgtactgaaagatgagctgc
ctgtctagagaaagaattttttatccatttagtcagtaattaaggtctct
ctgacctccatttttaagacatatagatgtcatggcactctaccagctgg
gtaaatctaagtttttcagtggctaacatttttaggtaccttatcagctc
aaacggggcaacagctattc
tagaatgtggaatgaaactctgccttaaattatttaaaaaaaaaaaataa
aatcaccaagtgattctgatccaaaaccttaatctcagcacttgggccaa
aaaaaaaaaaaaaaaaaaaatctctcaattcaaggccaatctggtctaca
gagcaatagccagggctatatgaggaaacctgtctcgagaaaacaaaaaa
aacaaaaaacaaaaaaaaaaacaaaaaacaaaaaaaattttgtctgacaa
caacaaaaatatacaaaaaaattggtaaaatatatatgtttattttaatc
agtttcttcacttttgaggttacttctatgtgcatattccaaattcaaat
ttttactaaaaaaatgtacagaattcctaatttgctgccattttctaaag
tcttccttgctttgcttttcacattaagtggaagttgagtgtattgtccg
atttctctagagaaacacaactaataggagagagagaggaaagggggata
gagggggaaagagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100738519_100739595
seq2: B6Ng01-022G11.b_41_1110

seq1  GAATTCTTGGGCAAATGGATGAATCTGGAGGATATCATCCTGAGTGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGCAAATGGATGAATCTGGAGGATATCATCCTGAGTGAGGT  50

seq1  CAATCACAAGAGATGTCACTTGATATGCACTCACTGATAAGTGGATATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACAAGAGATGTCACTTGATATGCACTCACTGATAAGTGGATATTA  100

seq1  ACCCAGAAACCTAGAATACCCAAGATACAATTTTTAAAACACAAGTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAAACCTAGAATACCCAAGATACAATTTTTAAAACACAAGTAATT  150

seq1  CTAGAAGGAAGACCAACATGGGGCTACTTCATTGCTCTCTAGAATAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGGAAGACCAACATGGGGCTACTTCATTGCTCTCTAGAATAGGGA  200

seq1  ATAAAATATCCATGGAAGGAGTTGCAGAGACAAAATTTGGAGCTAAGACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATATCCATGGAAGGAGTTGCAGAGACAAAATTTGGAGCTAAGACG  250

seq1  AAAGGATGGACCAAACTCAGGGTTTTTATAAGAGAAAGTGTTCTTCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATGGACCAAACTCAGGGTTTTTATAAGAGAAAGTGTTCTTCAGTG  300

seq1  CTAAGCCATCTCTCCTATCTGTCAATTTGACTTAATCTCAAAAAAGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCATCTCTCCTATCTGTCAATTTGACTTAATCTCAAAAAAGTAAG  350

seq1  TTTAAGGTGATTATGCATGAATAGCCAGTTGCTTGCCATTCTCATCATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGTGATTATGCATGAATAGCCAGTTGCTTGCCATTCTCATCATGT  400

seq1  CTTCTCTGTCTACTCTGCATATAGGAAAGGTCTCTAGACCTTGACTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGTCTACTCTGCATATAGGAAAGGTCTCTAGACCTTGACTTTTT  450

seq1  CTTTTCCTTTGACATAGTAAAAATCTAGGGTGCCAGCTTGAACCATTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCTTTGACATAGTAAAAATCTAGGGTGCCAGCTTGAACCATTGGA  500

seq1  TCCAACCCTCCATCCATTCCTTTCAAAGGCTATAGATTCTGTGACCCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCCTCCATCCATTCCTTTCAAAGGCTATAGATTCTGTGACCCATA  550

seq1  ACTTATTGTGAAGCAAAAGAGAGAGGCAAGGAAGTCTCATGCCCATAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTGTGAAGCAAAAGAGAGAGGCAAGGAAGTCTCATGCCCATAGCA  600

seq1  AGAACCCCTTGAACAGCTGCAGGGGCTGAGAAATATCCCGTAACAGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCCTTGAACAGCTGCAGGGGCTGAGAAATATCCCGTAACAGAGTT  650

seq1  AAATAAAAGCATGTGGTGTGTAACTCATAGATGTAATATGACTGGTTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAGCATGTGGTGTGTAACTCATAGATGTAATATGACTGGTTGAC  700

seq1  TTGTTCCTTAGGAGAGAAGGTTGAGTTTCTGACAATGCTAGTGTGACAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTTAGGAGAGAAGGTTGAGTTTCTGACAATGCTAGTGTGACAAG  750

seq1  GAAGGTGTTGTTACTGACTACTGCCAATTTAGAATGCCAACATTATATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGTTGTTACTGACTACTGCCAATTTAGAATGCCAACATTATATCT  800

seq1  TACTTGTGTTCCTTTAAGTATGAAACATGATGTAGAAATGAAACGATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTGTTCCTTTAAGTATGAAACATGATGTAGAAATGAAACGATTAA  850

seq1  AATAAATGGTGCCATCAGTTCCCTGGGAGATGTACTGAAAGATGAGGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATAAATGGTGCCATCAGTTCCCTGGGAGATGTACTGAAAGATGA-GCTG  899

seq1  CCTGTCTAGAGAAAGAATTTTTTTATCCATTTAGTCAGTAATTTAAGGTC  950
      ||||||||||||||||| ||||||||||||||||||||||| ||||||||
seq2  CCTGTCTAGAGAAAGAA-TTTTTTATCCATTTAGTCAGTAA-TTAAGGTC  947

seq1  TCTCTGACCTCCATTTTTAAGACATATAGATGTCATGGCACTTCTACCAG  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCTCTGACCTCCATTTTTAAGACATATAGATGTCATGGCAC-TCTACCAG  996

seq1  CTGGTTAAATCT-AGTTTTTCAGTGGCTAACATTTTAAGGTTACTTTATC  1049
      |||| ||||||| ||||||||||||||||||||||| ||| ||| |||||
seq2  CTGGGTAAATCTAAGTTTTTCAGTGGCTAACATTTTTAGG-TACCTTATC  1045

seq1  AGCATCAACACTGGACAACAGCATATTC  1077
      ||| |||| || || ||||||| |||||
seq2  AGC-TCAA-ACGGGGCAACAGC-TATTC  1070

seq1: chr14_100887559_100888079
seq2: B6Ng01-022G11.g_70_590 (reverse)

seq1  TTCTCTTTCCCCCTCTATCCCCCTTTCCTCTCTCTCTCCTATTAGTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTCCCCCTCTATCCCCCTTTCCTCTCTCTCTCCTATTAGTTGTG  50

seq1  TTTCTCTAGAGAAATCGGACAATACACTCAACTTCCACTTAATGTGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAGAGAAATCGGACAATACACTCAACTTCCACTTAATGTGAAAA  100

seq1  GCAAAGCAAGGAAGACTTTAGAAAATGGCAGCAAATTAGGAATTCTGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCAAGGAAGACTTTAGAAAATGGCAGCAAATTAGGAATTCTGTAC  150

seq1  ATTTTTTTAGTAAAAATTTGAATCTGGAATATGCACATAGAAGTAACCTC  200
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATTTTTTTAGTAAAAATTTGAATTTGGAATATGCACATAGAAGTAACCTC  200

seq1  AAAAGTGAAGAAACTGATTAAAATAAACATATATATTTTACCAATTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGAAGAAACTGATTAAAATAAACATATATATTTTACCAATTTTTT  250

seq1  TGTATATTTTTGTTGTTGTCAGACAAAATTTTTTTTGTTTTTTGTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTTTTGTTGTTGTCAGACAAAATTTTTTTTGTTTTTTGTTTTTT  300

seq1  TTTTTGTTTTTTGTTTTTTTTGTTTTCTCGAGACAGGTTTCCTCATATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTTGTTTTTTTTGTTTTCTCGAGACAGGTTTCCTCATATAG  350

seq1  CCCTGGCTATTGCTCTGTAGACCAGATTGGCCTTGAATTGAGAGATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTATTGCTCTGTAGACCAGATTGGCCTTGAATTGAGAGATTTTT  400

seq1  TTTTTTTTTTTTTTTTTGGCCCAAGTGCTGAGATTAAGGTTTTGGATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTGGCCCAAGTGCTGAGATTAAGGTTTTGGATCAG  450

seq1  AATCACTTGGTGATTTTATTTTTTTTTTTTAAATAATTTAAGGCAGAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTGGTGATTTTATTTTTTTTTTTTAAATAATTTAAGGCAGAGTT  500

seq1  TCATTCCACATTCTAGAATTC  521
      |||||||||||||||||||||
seq2  TCATTCCACATTCTAGAATTC  521