BAC Information

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BAC

Clone NameB6Ng01-022M13
Chromosome14 (Build37)
Map Location 111,127,288 - 111,127,997
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494, Slitrk5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022M13.bB6Ng01-022M13.g
ACCDH854892DH854893
length971711
definitionDH854892|Mus musculus domesticus DNA, BAC clone: B6Ng01-022M13, 5' end.DH854893|Mus musculus domesticus DNA, BAC clone: B6Ng01-022M13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaactatgtaccccattttaaataggttttgttgttgttgtt
gttgttgtttttcagagtctaacttcttgagttcttttcagtttgctttt
ttatacaatccagaatcacatgcctggaatgccataacccacagcgggct
agactctctctcagcaattagtaatgaatgacacaccaatgtgatgatga
aaattccccaaaggaacttccctcttccaaagtgacactagttttgtccc
aaaaaggaaaaataatgcaaatcgttccattcttatctctttgtacaaag
ctcatatccaagtggataaaggacctccacataaaaccagagacactgaa
acttttagaggagaaagtggggaagaaccttgagcacatgggcacagagg
acatgttcctgaacagaataacagtatcttatgttctaagatcaagaata
gacaaatgggaccttataaaattgcaaagcttctctaaggcaaaggacac
tgtcaatagggcaaaaggcaaccaacagattgagaaaagatctttaccaa
tgttacatctgatagagggctaatatccaatacatacaaagaactcgaga
agacagactccagagaaacaaataaacttattttaaaaatggagtacaga
actaaacaaagaattctccactgaggaatcctgaatgagtgagaagcacc
taaagaaatgtacaacatccttattcatcagggaaatgcaaatcaaaaca
acactgagattccacctcactccagtcagaatggttaagatcaaaaactc
agtgacagcagatcctggagaggatgtggagaaagaggaagacttctcca
ttgctggtgatattgcaagcttgttcaaccactctggaattcagtttggt
gggtcctcagaaaattgggtgtagtactgccttaagatccacaatacatc
tcctggtctatatacccacga
gaattcttgatttctatctccatttaacctaaggtctttgtatgagttga
acagaacactttattgcccttttattttttttttgagttttttttttata
gattttagaatttacttgctttatcatggcaataacgaataagaaaagaa
gcacacgcaaaagcctccactgtctgctgtcgacatgcctctagatctaa
tgctctgctagaatcctccaattaccctaacaagtatttgttttccattt
aagattttcaaataagacccgaaacagaatgtttttccacaaaaaaagtg
gcacaagagtttgaatctaaaaattaattttatttttcattgtatttgat
tttttttatataaatcatcacttatacagtgaagacatgataagaaaaaa
actcctttgacaacagcaagttccctgtcatgcactgtttgtgcagacca
agcttggtttcctttgaacttggaactaattgtacaatcagttatacatc
atcgcattgtcagtttgctaaactggagggcaaaaaggctgattaccagg
aagttcgttttaaagccaaaaggtcaaagtcttttgtaattacttccctt
tagatttctatttcttcagtggggtagggattagggagggtaaagaatcg
catgtgttcttccttttatgtggaatctacagaggagggtattttgatac
ttaaagggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111127288_111127997
seq2: B6Ng01-022M13.g_69_779

seq1  GAATTCTTGATTTCTATCTCCATTTAACCTAAGGTCTTTGTATGAGTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATTTCTATCTCCATTTAACCTAAGGTCTTTGTATGAGTTGA  50

seq1  ACAGAACACTTTATTGCCCTTTTATTTTTTTTTTGAGTTTTTTTTTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACACTTTATTGCCCTTTTATTTTTTTTTTGAGTTTTTTTTTTATA  100

seq1  GATTTTAGAATTTACTTGCTTTATCATGGCAATAACGAATAAGAAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAGAATTTACTTGCTTTATCATGGCAATAACGAATAAGAAAAGAA  150

seq1  GCACACGCAAAAGCCTCCACTGTCTGCTGTCGACATGCCTCTAGATCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACGCAAAAGCCTCCACTGTCTGCTGTCGACATGCCTCTAGATCTAA  200

seq1  TGCTCTGCTAGAATCCTCCAATTACCCTAACAAGTATTTGTTTTCCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGCTAGAATCCTCCAATTACCCTAACAAGTATTTGTTTTCCATTT  250

seq1  AAGATTTTCAAATAAGACCCGAAACAGAATGTTTTTCCACAAAAAAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTCAAATAAGACCCGAAACAGAATGTTTTTCCACAAAAAAAGTG  300

seq1  GCACAAGAGTTTGAATCTAAAAATTAATTTTATTTTTCATTGTATTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGAGTTTGAATCTAAAAATTAATTTTATTTTTCATTGTATTTGAT  350

seq1  TTTTTTTATATAAATCATCACTTATACAGTGAAGACATGATAAGAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATATAAATCATCACTTATACAGTGAAGACATGATAAGAAAAAA  400

seq1  ACTCCTTTGACAACAGCAAGTTCCCTGTCATGCACTGTTTGTGCAGACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTTGACAACAGCAAGTTCCCTGTCATGCACTGTTTGTGCAGACCA  450

seq1  AGCTTGGTTTCCTTTGAACTTGGAACTAATTGTACAATCAGTTATACATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGTTTCCTTTGAACTTGGAACTAATTGTACAATCAGTTATACATC  500

seq1  ATCGCATTGTCAGTTTGCTAAACTGGAGGGCAAAAAGGCTGATTACCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCATTGTCAGTTTGCTAAACTGGAGGGCAAAAAGGCTGATTACCAGG  550

seq1  AAGTTCGTTTTAAAGCCAAAAGGTCAAAGTCTTTTGTAATTACTTCCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCGTTTTAAAGCCAAAAGGTCAAAGTCTTTTGTAATTACTTCCCTT  600

seq1  TAGATTTCTATTTCTTCAGTGGGGTAGGGATTAGGGAGGGTAAAGAATCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTCTATTTCTTCAGTGGGGTAGGGATTAGGGAGGGTAAAGAATCG  650

seq1  CATGTGTTCTTCC-TTTATGTGGAATCTACAGAGGAGGGTATTATGATAC  699
      ||||||||||||| ||||||||||||||||||||||||||||| ||||||
seq2  CATGTGTTCTTCCTTTTATGTGGAATCTACAGAGGAGGGTATTTTGATAC  700

seq1  TTAAAGGGCAG  710
      |||||||||||
seq2  TTAAAGGGCAG  711