BAC Information

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BAC

Clone NameB6Ng01-023A02
Chromosome14 (Build37)
Map Location 62,274,038 - 62,408,931
singlet/doubletdoublet
Overlap geneLOC668253
Upstream geneSpata13, C1qtnf9, Mipep, LOC100043586, Tnfrsf19, Sacs, Sgcg, Arl11, EG432864, Ebpl, Kpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg
Downstream geneDleu7, Rnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059, E130113E03Rik, Ints6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023A02.bB6Ng01-023A02.g
ACCDH855049DH855050
length1,0011,051
definitionDH855049|Mus musculus domesticus DNA, BAC clone: B6Ng01-023A02, 5' end.DH855050|Mus musculus domesticus DNA, BAC clone: B6Ng01-023A02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,274,038 - 62,275,053)(62,407,863 - 62,408,931)
sequence
gaattcaagttccgtttgaaagtaagaccactatgtggtctaaaactcga
ttatcctagattgcctgagtagacccccatcactgttggtcttttaagtg
tggtagaagcagcatcagagaagtggcggtgttgagaggtgaaaaaggct
caaccaggtttgaagatggaaggtttggagccaaggaatagcttgtgagc
tccagaagctaaaaaggggtctcatagagccttcagagggatcacaactt
tgcctccttcttagttttgtgatactgagactcattttggattcctgacc
ttcaaaactgtttacagccattaactttataactgtgtaactgcacagca
ataggaaacatgtaaccagccattgtctttgtttttacagcatttatgtg
tgttgtgtgtcatggggagggggactcacgtttgccaaatgcatatggtt
ctctcctcataccatgtcagttccagggaatcaaactaaggtcatcaggc
ttggcagcaagtgcctttacccaccaagccgccccactgccagcaagtgc
ctttacccaccaagccgccccactgccagcaaactgccatttctatgtgg
tagaaaaatgaacagtcaatactaagtattgtagtgtactgatttgctta
tagaaattcataggctattttttagattctttttttaaggtctacagagt
gtcaaagctcaagatgaagaactggttcaatagagcatctagtctaccac
tgaaattatatacctagaggtcacaccataatttgtcagtagaatatgga
gagctcgtcctgtggattactcatctaagtattccacttaaatttgaaat
ttattttaggctggtattagttgttcaaataacttaaatattctccctat
agcaatatctctttctagaaagaaatcctctcaagggcattatatatatg
tcccagtatggcttggccatgttagggacagtatggcatgtttcctgccc
t
gaattctttagtgcacataataatgaaaacaaatggttggtaattcagga
tcagtgtgtggacaattcttagcagtttcaaaggggtcttcctagtactc
tttaaaataatagtgcctagtgagagactataaataaatcttgatctcag
ttgaaaatagtgtagaaaaatgaaagtaatgagtaactacactttgtgcc
caaagaatcgtaaagtgccacagccaaggagcgtgggttccagagttttt
ggcaaagtgaaggcagagtagtgccagcccctggttgtatctacattcct
ctaagggcttcagggcgctttgtaattcacttgtactgtcctatgcgaaa
agcggtcagttaagtgagttgcccacagctcacaccaagtcagttcagaa
accagcagtgcagcccgtcatccaaaccacgggtcccagcatccaagagt
ctattgtgtttttaccacatcttctgacatgctccacaggccaaagctga
gtcagaaacagaagtaagaagtcagttaaaagttaacagcatggtaatcc
cattacccctgggccgggaagtgagggtagagtgtataaggagtcgggga
aagggaagacaccgtggacacctgccgcatgcccatcacttcgctggaca
cgtgcaggtactcacagtaaatgatagaaagttgttctcttggtataaac
aaatacctccttcagggttgttctctggccaagcatcctgaggaccctgg
agattcccaagaacaaggcagagcctcttccttcacagaaccacattctg
attggtgaagacacaataaacaagtcagctaatgaatacacaagagggaa
gtaagcgctaggcagacaagtaagatgcgatgatgtaacagtccgacaga
gggaaagtgggctgggcacagtgccatggggtggggagagctgtctcaga
gacgtgcctagagaccagcatgcgcattccatgagagatgtagagattgg
tcagccgtgtgtcagccgggtatgacacatacagactgatgtctgtatgt
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_62274038_62275053
seq2: B6Ng01-023A02.b_42_1041

seq1  GAATTCAAGTTCCGTTTGAAAGTAAGACCACTATGTGGTCTAAAACTCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTTCCGTTTGAAAGTAAGACCACTATGTGGTCTAAAACTCGA  50

seq1  TTATCCTAGATTGCCTGAGTAGACCCCCATCACTGTTGGTCTTTTAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTAGATTGCCTGAGTAGACCCCCATCACTGTTGGTCTTTTAAGTG  100

seq1  TGGTAGAAGCAGCATCAGAGAAGTGGCGGTGTTGAGAGGTGAAAAAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAAGCAGCATCAGAGAAGTGGCGGTGTTGAGAGGTGAAAAAGGCT  150

seq1  CAACCAGGTTTGAAGATGGAAGGTTTGGAGCCAAGGAATAGCTTGTGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGGTTTGAAGATGGAAGGTTTGGAGCCAAGGAATAGCTTGTGAGC  200

seq1  TCCAGAAGCTAAAAAGGGGTCTCATAGAGCCTTCAGAGGGATCACAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGCTAAAAAGGGGTCTCATAGAGCCTTCAGAGGGATCACAACTT  250

seq1  TGCCTCCTTCTTAGTTTTGTGATACTGAGACTCATTTTGGATTCCTGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTTCTTAGTTTTGTGATACTGAGACTCATTTTGGATTCCTGACC  300

seq1  TTCAAAACTGTTTACAGCCATTAACTTTATAACTGTGTAACTGCACAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACTGTTTACAGCCATTAACTTTATAACTGTGTAACTGCACAGCA  350

seq1  ATAGGAAACATGTAACCAGCCATTGTCTTTGTTTTTACAGCATTTATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAACATGTAACCAGCCATTGTCTTTGTTTTTACAGCATTTATGTG  400

seq1  TGTTGTGTGTCATGGGGAGGGGGACTCACGTTTGCCAAATGCATATGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGTGTCATGGGGAGGGGGACTCACGTTTGCCAAATGCATATGGTT  450

seq1  CTCTCCTCATACCATGTCAGTTCCAGGGAATCAAACTAAGGTCATCAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCATACCATGTCAGTTCCAGGGAATCAAACTAAGGTCATCAGGC  500

seq1  TTGGCAGCAAGTGCCTTTACCCACCAAGCCGCCCCACTGCCAGCAAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGCAAGTGCCTTTACCCACCAAGCCGCCCCACTGCCAGCAAGTGC  550

seq1  CTTTACCCACCAAGCCGCCCCACTGCCAGCAAACTGCCATTTCTATGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCCACCAAGCCGCCCCACTGCCAGCAAACTGCCATTTCTATGTGG  600

seq1  TAGAAAAATGAACAGTCAATACTAAGTATTGTAGTGTACTGATTTGCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAATGAACAGTCAATACTAAGTATTGTAGTGTACTGATTTGCTTA  650

seq1  TAGAAATTCATAGGCTATTTTTTAGATTCTTTTTTTAAGGTCTACAGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTCATAGGCTATTTTTTAGATTCTTTTTTTAAGGTCTACAGAGT  700

seq1  GTCAAAGCTCAAGATGAAGAACTGGTTCAATAGAGCATCTAGTCTACCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGCTCAAGATGAAGAACTGGTTCAATAGAGCATCTAGTCTACCAC  750

seq1  TGAAATTATATACCTAGAGGTCACACCATAATTTGTCAGTAGGAATATGG  800
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAAATTATATACCTAGAGGTCACACCATAATTTGTCAGTA-GAATATGG  799

seq1  AGAGCTCGTCCTGTGGATTTACTCATCTAAGTATTCCACTTAAATTTGAA  850
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGAGCTCGTCCTGTGGA-TTACTCATCTAAGTATTCCACTTAAATTTGAA  848

seq1  ATTTATTTTAGGCTGGTATTTAGTTTGTTCAAATAACTTAGATTATTTCT  900
      |||||||||||||||||| |||| |||||||||||||||| ||   ||||
seq2  ATTTATTTTAGGCTGGTA-TTAG-TTGTTCAAATAACTTAAAT--ATTCT  894

seq1  CCCCTATAGCAAATATCTCTTTCTTAGAAAGAAATCCTTCTCAGAGGGCA  950
       ||||||||| |||||||||||| ||||||||||||| ||||| ||||||
seq2  -CCCTATAGC-AATATCTCTTTC-TAGAAAGAAATCC-TCTCA-AGGGCA  939

seq1  TTTATATAATATGGTACCCAGTATGGCTTGGCCATGTTAGGGACAGTATG  1000
       |||||| |||||   ||||||||||||||||||||||||||||||||||
seq2  -TTATAT-ATATG--TCCCAGTATGGCTTGGCCATGTTAGGGACAGTATG  985

seq1  GCATGGTTTCCTGCCC  1016
      |||| |||||||||||
seq2  GCAT-GTTTCCTGCCC  1000

seq1: chr14_62407863_62408931
seq2: B6Ng01-023A02.g_66_1116 (reverse)

seq1  GACATACAGACATCAGTCTGTATGTTGTCATACACGCGCTTGAACAACAA  50
      |||||||||||||||||||||||| |||||||| || |||   ||    |
seq2  GACATACAGACATCAGTCTGTATG-TGTCATACCCG-GCTGACAC----A  44

seq1  CGGCTGGACCATCTCCTTACATCTTCTCATGTGAATGCGCATGCCTGGTT  100
      ||||||  | |||||  |||||| ||||||| ||||||||||| |||| |
seq2  CGGCTGACCAATCTC--TACATC-TCTCATG-GAATGCGCATG-CTGG-T  88

seq1  CTCTAGGGCACGTCCTCTTGGAGACCGCTCCTCCCCACCCCATGGCACTG  150
      ||||| ||||||| ||||  ||||| ||| ||||||||||||||||||||
seq2  CTCTA-GGCACGT-CTCT--GAGACAGCT-CTCCCCACCCCATGGCACTG  133

seq1  TGCCCAGCCCACTTTCCCTCTTGTCGGACTGTTACATCATCGCATCTTAC  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGCCCAGCCCACTTTCCCTC-TGTCGGACTGTTACATCATCGCATCTTAC  182

seq1  TTGTCTGCCTAGCGCTTACTTCCCTCTTGTGTATTCATTAGCTGACTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGCCTAGCGCTTACTTCCCTCTTGTGTATTCATTAGCTGACTTGT  232

seq1  TTATTGTGTCTTCACCAATCAGAATGTGGTTCTGTGAAGGAAGAGGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTGTCTTCACCAATCAGAATGTGGTTCTGTGAAGGAAGAGGCTCT  282

seq1  GCCTTGTTCTTGGGAATCTCCAGGGTCCTCAGGATGCTTGGCCAGAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTTCTTGGGAATCTCCAGGGTCCTCAGGATGCTTGGCCAGAGAAC  332

seq1  AACCCTGAAGGAGGTATTTGTTTATACCAAGAGAACAACTTTCTATCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGAAGGAGGTATTTGTTTATACCAAGAGAACAACTTTCTATCATT  382

seq1  TACTGTGAGTACCTGCACGTGTCCAGCGAAGTGATGGGCATGCGGCAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGAGTACCTGCACGTGTCCAGCGAAGTGATGGGCATGCGGCAGGT  432

seq1  GTCCACGGTGTCTTCCCTTTCCCCGACTCCTTATACACTCTACCCTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACGGTGTCTTCCCTTTCCCCGACTCCTTATACACTCTACCCTCACT  482

seq1  TCCCGGCCCAGGGGTAATGGGATTACCATGCTGTTAACTTTTAACTGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGCCCAGGGGTAATGGGATTACCATGCTGTTAACTTTTAACTGACT  532

seq1  TCTTACTTCTGTTTCTGACTCAGCTTTGGCCTGTGGAGCATGTCAGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTTCTGTTTCTGACTCAGCTTTGGCCTGTGGAGCATGTCAGAAGA  582

seq1  TGTGGTAAAAACACAATAGACTCTTGGATGCTGGGACCCGTGGTTTGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTAAAAACACAATAGACTCTTGGATGCTGGGACCCGTGGTTTGGAT  632

seq1  GACGGGCTGCACTGCTGGTTTCTGAACTGACTTGGTGTGAGCTGTGGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGGCTGCACTGCTGGTTTCTGAACTGACTTGGTGTGAGCTGTGGGCA  682

seq1  ACTCACTTAACTGACCGCTTTTCGCATAGGACAGTACAAGTGAATTACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTTAACTGACCGCTTTTCGCATAGGACAGTACAAGTGAATTACAA  732

seq1  AGCGCCCTGAAGCCCTTAGAGGAATGTAGATACAACCAGGGGCTGGCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCCCTGAAGCCCTTAGAGGAATGTAGATACAACCAGGGGCTGGCACT  782

seq1  ACTCTGCCTTCACTTTGCCAAAAACTCTGGAACCCACGCTCCTTGGCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCCTTCACTTTGCCAAAAACTCTGGAACCCACGCTCCTTGGCTGT  832

seq1  GGCACTTTACGATTCTTTGGGCACAAAGTGTAGTTACTCATTACTTTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTTACGATTCTTTGGGCACAAAGTGTAGTTACTCATTACTTTCAT  882

seq1  TTTTCTACACTATTTTCAACTGAGATCAAGATTTATTTATAGTCTCTCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACACTATTTTCAACTGAGATCAAGATTTATTTATAGTCTCTCAC  932

seq1  TAGGCACTATTATTTTAAAGAGTACTAGGAAGACCCCTTTGAAACTGCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCACTATTATTTTAAAGAGTACTAGGAAGACCCCTTTGAAACTGCTA  982

seq1  AGAATTGTCCACACACTGATCCTGAATTACCAACCATTTGTTTTCATTAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGTCCACACACTGATCCTGAATTACCAACCATTTGTTTTCATTAT  1032

seq1  TATGTGCACTAAAGAATTC  1069
      |||||||||||||||||||
seq2  TATGTGCACTAAAGAATTC  1051