BAC Information

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BAC

Clone NameB6Ng01-023I01
Chromosome14 (Build37)
Map Location 52,892,563 - 52,893,107
singlet/doubletsinglet
Overlap geneRab2b
Upstream geneLOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8
Downstream geneTox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612, LOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424, LOC100042601
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023I01.bB6Ng01-023I01.g
ACCDH855404DH855405
length1,060539
definitionDH855404|Mus musculus domesticus DNA, BAC clone: B6Ng01-023I01, 5' end.DH855405|Mus musculus domesticus DNA, BAC clone: B6Ng01-023I01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatctgattcagagctactaagattctggctccttgagctca
tctagtgatgagtataggctccttctcctagagacctccgctaattgatc
ttttttcttttcttttttcttttccttccttctaatctctccccaggtat
tcttatctgacctaaacttttcctcgggttcaagacccgtggaaaggcct
gtatacttattttgtgcgccatatttcctctttgcttctactctctctcc
ccgctttacttctgatagattgccctgaatttcatccagaattttcagcc
ctgccttaaccacttgataacatgtgaaaaggaacaaaaaggctcctaac
actagagaaagttcaaggccaaacataccttgtaaagctatttcccactt
tacttctgatagactgtcttgaatttcgttagaaagttcaagaccagact
taccttgtaaagctatacttacgggtaccctgttccccagctgaagagtt
ctgaattcacgcagttgaatccttctcaacagtctgtgttacgggaacac
ttcattaccaccgttccccagctgaggagttctgaatccaggctggatcc
ttctcaacagtctgttttacgagattaccagatggcgaaaggcaaacata
agaatcttactaacagaaaccaaaaccactcaccatcaccagaacccagc
actcccacctcgcccagtagagggcaccccaacatacacgaaaagctaga
ccggatttaaaagcatatctcatgatgatggtagaggacataaagaaagg
actttaataactcacttaaaagaaatacaggagaacactgctaatcaggt
agaagatcttaagaggaagctcaaaaatttccttaaaaaattacaggaaa
atcatgactcaatcagttgatggaattgaataaactcatcctagacttaa
aaaggaagtgacacattaataaaactcaaagtgagcactgctggaaatag
aacctctaggaaagaatctggaacctcagatgcaacagctccatcaaccg
aattacggag
acattgctcctccctctgccttttaagcactggcctatgggctgtttgaa
tgagaattccccccccccctccaggctcatttgtttgaacgccccagtta
gtaggacggtttgggaaggtctaggggtatggccttgatggaggaaatgt
gtcactagggctttgatgttttggcctgcagatcaagatgtaaagctctc
agctccagctccagtgtcatgttggtctgcttcctgccatgatatgatca
ctgaataaccccccaaactgtaaggaagcccctaattaagtttctttcat
aagagttgtcttagtcctaatgtcttctcatacaacagacaatcactaag
acatgggagtaggaaagccaccacaccaagttgaacatggaacttcaatg
aagctttgtaatttctcccaagtgagagtaagatatacagtttgaaatat
cagctataagtcagatactggttttgttgttggtcttttgtaggtgatgg
gttttttgcttagtttttttttggggggggcggggggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_52892563_52893107
seq2: B6Ng01-023I01.g_68_612

seq1  GAATTCACATTGCTCCTCCCTCTGCCTTTTAAGCACTGGCCTATGGGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTGCTCCTCCCTCTGCCTTTTAAGCACTGGCCTATGGGCTG  50

seq1  TTTGAATGAGAATTCCCCCCCCCCCTCCAGGCTCATTTGTTTGAACGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATGAGAATTCCCCCCCCCCCTCCAGGCTCATTTGTTTGAACGCCC  100

seq1  CAGTTAGTAGGACGGTTTGGGAAGGTCTAGGGGTATGGCCTTGATGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGTAGGACGGTTTGGGAAGGTCTAGGGGTATGGCCTTGATGGAGG  150

seq1  AAATGTGTCACTAGGGCTTTGATGTTTTGGCCTGCAGATCAAGATGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTCACTAGGGCTTTGATGTTTTGGCCTGCAGATCAAGATGTAAA  200

seq1  GCTCTCAGCTCCAGCTCCAGTGTCATGTTGGTCTGCTTCCTGCCATGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCAGCTCCAGCTCCAGTGTCATGTTGGTCTGCTTCCTGCCATGATA  250

seq1  TGATCACTGAATAACCCCCCAAACTGTAAGGAAGCCCCTAATTAAGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACTGAATAACCCCCCAAACTGTAAGGAAGCCCCTAATTAAGTTTC  300

seq1  TTTCATAAGAGTTGTCTTAGTCCTAATGTCTTCTCATACAACAGACAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAAGAGTTGTCTTAGTCCTAATGTCTTCTCATACAACAGACAATC  350

seq1  ACTAAGACATGGGAGTAGGAAAGCCACCACACCAAGTTGAACATGGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGACATGGGAGTAGGAAAGCCACCACACCAAGTTGAACATGGAACT  400

seq1  TCAATGAAGCTTTGTAATTTCTCCCAAGTGAGAGTAAGATATACAGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAAGCTTTGTAATTTCTCCCAAGTGAGAGTAAGATATACAGTTTG  450

seq1  AAATATCAGCTATAAGTCAGATACTGGTTTTGTTGTTGGTCTTTTGTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAGCTATAAGTCAGATACTGGTTTTGTTGTTGGTCTTTTGTAGG  500

seq1  TGATGGGTTTTTTGCTTAGTTTTTTTTTGGGGGGGGCGGGGGGTA  545
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGTTTTTTGCTTAGTTTTTTTTTGGGGGGGGCGGGGGGTA  545