BAC Information

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BAC

Clone NameB6Ng01-024H10
Chromosome14 (Build37)
Map Location 63,846,553 - 63,997,232
singlet/doubletdoublet
Overlap geneGata4, LOC100042988, LOC432868, Blk
Upstream geneDleu7, Rnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059, E130113E03Rik, Ints6, LOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2
Downstream geneLOC668293, BC065085, Tdh, Mtmr9, Xkr6, LOC668306, 2610028A01Rik, Sox7, 4930578I06Rik, Rp1l1, 4933401F05Rik, 1700007N14Rik, 1700049K14Rik, Msra
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024H10.bB6Ng01-024H10.g
ACCDH856091DH856092
length3691,046
definitionDH856091|Mus musculus domesticus DNA, BAC clone: B6Ng01-024H10, 5' end.DH856092|Mus musculus domesticus DNA, BAC clone: B6Ng01-024H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,846,553 - 63,846,920)(63,996,182 - 63,997,232)
sequence
gaattcccaggccttgtctgagctaccaaagaacttcaaggccagcctgg
acaacttattgggactctacatcaaaattaataaaataataagatgaaat
gggggcgtgttggaggtgtggctagtgctttcctcgcttatgcaaaccct
gaggtttctctttgcgctgcaaagcaaaccagtattttccccatgcaaat
actgccattcctgtgtaaagccactcccaccatttaccacattacagaaa
acacaggtggatggtgttacacaaagtgcaaggaggtagggctaggacag
actgcctcctagggtcagatcactgcctttcttgcaccccagagttgggt
ggaggattggggtttggtt
gaattccctggtaggaggctgtgctcaactgtgaagggcagaaagcctga
agtagcgacctctaaatatataaacccctagagaacagatgagagacttt
actcactgatgtcctctgccctgatagcatggtagatgctgaagcttcat
cacccacccttgacccttagccagcaagatgatggtgataaaaatcccac
ctcctttcctctagagacacatccctcccactcacctcaatgagaggctc
ccttggctgcaagggagtctgggaaatgtagttccaattctgggccgcca
tgatggagtagggtagttctatttattaggaaggtagagatggcagtgga
tgttggaaagctggagaataggaaagaattctgttttgaatgtaggcagg
tatgctttgctctgacttccttctccaatgctctcatcctgtcctaagac
cccctaaatcttggtattggcctggaactgacctcagcctgatgaggcat
gagccacacagaatacaaggcacaaaactttctaggaccaccttctacac
acacacacacacacacacacacacacacacacacacacacacacacacac
acatcactgtcctggattattggcctttggttccctctgaatccatccat
gtgtagacctccccagcctctgctagaagagtgcagaattgagattgggc
agtatcttttatccccggggggattttagctgagggttctaactggcagg
aagacacatctgggggccctgagtatgactgttgaaaactggaactctca
gcaagaaagctgtggtctgtggccagcctgcgagacacactgtcaacaca
cagagagctataaaggggagcttcccaaccacactttaacccacttgccc
actttaaacttccgaccctgtcccacatatctgcagctgcttatcagccc
agaactgaaggtacagggttttttccctggggtagcagaaattgtgtgat
gcactgtgtagaaggaccaaaacttaaccctggcgactgctttgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_63846553_63846920
seq2: B6Ng01-024H10.b_26_394

seq1  GAATTCCCAGGCC-TGTCTGAGCTACCAAAGAACTTCAAGGCCAGCCTGG  49
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGGCCTTGTCTGAGCTACCAAAGAACTTCAAGGCCAGCCTGG  50

seq1  ACAACTTATTGGGACTCTACATCAAAATTAATAAAATAATAAGATGAAAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTATTGGGACTCTACATCAAAATTAATAAAATAATAAGATGAAAT  100

seq1  GGGGGCGTGTTGGAGGTGTGGCTAGTGCTTTCCTCGCTTATGCAAACCCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCGTGTTGGAGGTGTGGCTAGTGCTTTCCTCGCTTATGCAAACCCT  150

seq1  GAGGTTTCTCTTTGCGCTGCAAAGCAAACCAGTATTTTCCCCATGCAAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTCTCTTTGCGCTGCAAAGCAAACCAGTATTTTCCCCATGCAAAT  200

seq1  ACTGCCATTCCTGTGTAAAGCCACTCCCACCATTTACCACATTACAGAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCATTCCTGTGTAAAGCCACTCCCACCATTTACCACATTACAGAAA  250

seq1  ACACAGGTGGATGGTGTTACACAAAGTGCAAGGAGGTAGGGCTAGGACAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTGGATGGTGTTACACAAAGTGCAAGGAGGTAGGGCTAGGACAG  300

seq1  ACTGCCTCCTAGGGTCAGATCACTGCCTTTCTTGCACCCCAGAGTTGGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTCCTAGGGTCAGATCACTGCCTTTCTTGCACCCCAGAGTTGGGT  350

seq1  GGAGGATTGGGGTTTGGTT  368
      |||||||||||||||||||
seq2  GGAGGATTGGGGTTTGGTT  369

seq1: chr14_63996182_63997232
seq2: B6Ng01-024H10.g_69_1114 (reverse)

seq1  CTCAAAGCCAGTCGCCAGGGTTAAGTTTCTGTGTCCATCCTAACAGCTGC  50
      ||||||| |||||||||||||||||||| || |||| ||   |||| |||
seq2  CTCAAAG-CAGTCGCCAGGGTTAAGTTT-TG-GTCCTTCTACACAG-TGC  46

seq1  ATCA-ACAGATCTCTGCTACCCCAGTGGAAAAAGACACTGTGACCTCAGT  99
      |||| ||| || ||||||||||||| ||||||| || ||||  | |||||
seq2  ATCACACA-ATTTCTGCTACCCCAG-GGAAAAA-ACCCTGTACCTTCAGT  93

seq1  TCCTGGGCTGAT-AGCAGCTGCAGATAATGTGGGACAGGGTCGGAAG-TT  147
      | |||||||||| ||||||||||||| |||||||||||||||||||| ||
seq2  T-CTGGGCTGATAAGCAGCTGCAGAT-ATGTGGGACAGGGTCGGAAGTTT  141

seq1  AAAGTGGGCAAGTGGGTTAAAGTGTGGGTGGGAAGGCTCCCCTTTATAGC  197
      ||||||||||||||||||||||||||| |||||| |||||||||||||||
seq2  AAAGTGGGCAAGTGGGTTAAAGTGTGGTTGGGAA-GCTCCCCTTTATAGC  190

seq1  TCTCTGTGTGTTGACAGTGTGTCTCGCAGGCTGGCCACAGACCACAGCTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTGTTGACAGTGTGTCTCGCAGGCTGGCCACAGACCACAGCTT  240

seq1  TCTTGCTGAGAGTTCCAG-TTTCAACAGTCATACTCAGGGCCCCCAGATG  296
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTTGCTGAGAGTTCCAGTTTTCAACAGTCATACTCAGGGCCCCCAGATG  290

seq1  TGTCTTCCTGCCAGTTAGAACCCTCAGCTAAAATCCCCCCGGGGAT-AAA  345
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGTCTTCCTGCCAGTTAGAACCCTCAGCTAAAATCCCCCCGGGGATAAAA  340

seq1  GATACTGCCCAATCTCAATTCTGCACTCTTCTAGCAGAGGCTGGGGAGGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGCCCAATCTCAATTCTGCACTCTTCTAGCAGAGGCTGGGGAGGT  390

seq1  CTACACATGGATGGATTCAGAGGGAACCAAAGGCCAATAATCCAGGACAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACATGGATGGATTCAGAGGGAACCAAAGGCCAATAATCCAGGACAG  440

seq1  TGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  490

seq1  GTGTGTGTGTAGAAGGTGGTCCTAGAAAGTTTTGTGCCTTGTATTCTGTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTAGAAGGTGGTCCTAGAAAGTTTTGTGCCTTGTATTCTGTG  540

seq1  TGGCTCATGCCTCATCAGGCTGAGGTCAGTTCCAGGCCAATACCAAGATT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCATGCCTCATCAGGCTGAGGTCAGTTCCAGGCCAATACCAAGATT  590

seq1  TAGGGGGTCTTAGGACAGGATGAGAGCATTGGAGAAGGAAGTCAGAGCAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGGTCTTAGGACAGGATGAGAGCATTGGAGAAGGAAGTCAGAGCAA  640

seq1  AGCATACCTGCCTACATTCAAAACAGAATTCTTTCCTATTCTCCAGCTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATACCTGCCTACATTCAAAACAGAATTCTTTCCTATTCTCCAGCTTT  690

seq1  CCAACATCCACTGCCATCTCTACCTTCCTAATAAATAGAACTACCCTACT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATCCACTGCCATCTCTACCTTCCTAATAAATAGAACTACCCTACT  740

seq1  CCATCATGGCGGCCCAGAATTGGAACTACATTTCCCAGACTCCCTTGCAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATGGCGGCCCAGAATTGGAACTACATTTCCCAGACTCCCTTGCAG  790

seq1  CCAAGGGAGCCTCTCATTGAGGTGAGTGGGAGGGATGTGTCTCTAGAGGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGAGCCTCTCATTGAGGTGAGTGGGAGGGATGTGTCTCTAGAGGA  840

seq1  AAGGAGGTGGGATTTTTATCACCATCATCTTGCTGGCTAAGGGTCAAGGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGTGGGATTTTTATCACCATCATCTTGCTGGCTAAGGGTCAAGGG  890

seq1  TGGGTGATGAAGCTTCAGCATCTACCATGCTATCAGGGCAGAGGACATCA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGATGAAGCTTCAGCATCTACCATGCTATCAGGGCAGAGGACATCA  940

seq1  GTGAGTAAAGTCTCTCATCTGTTCTCTAGGGGTTTATATATTTAGAGGTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTAAAGTCTCTCATCTGTTCTCTAGGGGTTTATATATTTAGAGGTC  990

seq1  GCTACTTCAGGCTTTCTGCCCTTCACAGTTGAGCACAGCCTCCTACCAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTCAGGCTTTCTGCCCTTCACAGTTGAGCACAGCCTCCTACCAGG  1040

seq1  GAATTC  1051
      ||||||
seq2  GAATTC  1046