BAC Information

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BAC

Clone NameB6Ng01-024M19
Chromosome14 (Build37)
Map Location 22,002,995 - 22,179,791
singlet/doubletdoublet
Overlap geneAdk
Upstream geneLOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1
Downstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024M19.bB6Ng01-024M19.g
ACCDH856325DH856326
length9281,130
definitionDH856325|Mus musculus domesticus DNA, BAC clone: B6Ng01-024M19, 5' end.DH856326|Mus musculus domesticus DNA, BAC clone: B6Ng01-024M19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,002,995 - 22,003,641)(22,178,645 - 22,179,791)
sequence
gaattcactttgtagaccaggctggactcgaactcagaagttcgcctgcc
tctgcctcccaagtgctgggattaaaggcatgcgccaccactgccccaga
aaagagtttttaagaattgaatgaaattaaatagacaacacatcaaacct
tggcaggcagtattgagacctaatgcaataaaagcttcctacagtgaata
cataaaggagatctaaaggaaattgccagataacggcaagacaggcttaa
ctggccatctcttgtcaaaccctggtattgcaaatgaagcttgcaatacc
agggttacgttacatctaattgagttgtcagccaaaggggtatcatggca
gtccccaaataacccaaggtcttctcaagattgtgcattgcttttcacaa
attgagacagggcccattgctgaagataacacattacttattgagcatgg
agaagttgggccggtacctacatagagccttcacccctatgtctgctaca
ggaagtgctctgaatgccaccaaaagagaaacaaacaccaagctcagcac
aaccctttggatctacattaatatccagtctgcaagatatacgagggcaa
tattgacacaaagcctgtgggagtatccaccaggctctggttggttgatt
tgacttagggccccctccaggaaatcgaatccataacctatactgattgg
gtgttcaggaacctgagagtagataacccggggatctagggtaaaaccaa
atactactgtttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagtaaaagg
atacaacatagcaataaaatgcctcctaatctcattctgctatactgaga
gagcaacatcacgctcaaccatcatcacaaaagctttctcctgcagcaga
taggaacacacacagaaacatagtcgga
gaattctccttcgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacgaggaaggcagagcacatggagtgaagaacca
ccctcggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacagtgcttgg
cttcaaatcattatcttgtaaggaaggggtgcctcaggacatttccacat
atgtaaacagttgcaagcaccagcacatttctggcttaggatggacattc
ttaggaaaagccaactcaattttctatcttggtgcctcttcacacaggct
tgctgagctgtgccctatcatcagaacagctaagtcctcgttctgtgtct
taaaatgatcttatcatctggcttcctctcaccttcctttgatcttggac
tggagccccaagtcacaccattagagctggcagctgtctcacatcactgt
ggactctgtcacactaacctctgatctgaaggtgtttgtagatacaatga
tggaaaggcatttatttttcccctcttagcaaaacaaacaaaacaacaga
ggggaacaggttgacccagcaagaattttaagcaggatttttgctctcag
attcaccacatgaaagagcagagagaaaaggtattaggtcagaaaacagg
gaaggagtgagcacgggtggtgggcagaagttaggcaggttccaagcatc
aggagtgattccaagtgaactgatcacactaaattgaaaaggacttgtta
gtgtgccattgccgtgaaagtgagaaaagaaaacaagcaagtccccatct
gtgctgccccagggcgcctcctcgtactgcgtttcacaaatctaatgaag
cagtcaggttaaatccagccaccaaggggctgtgacatgtggggagcagc
tagggctaggagaaaagcaggcggtcctgatgcagtgattatccacgtga
ttatcactgtattacaaaaagctccccatttagatctgacataaaaaaaa
tccaaaggaggagggattagggagatgattctgactggaggttgcctgct
ccgaattacagacgtccattcttgatggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22002995_22003641
seq2: B6Ng01-024M19.b_44_690

seq1  GAATTCACTTTGTAGACCAGGCTGGACTCGAACTCAGAAGTTCGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGACTCGAACTCAGAAGTTCGCCTGCC  50

seq1  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCGCCACCACTGCCCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCGCCACCACTGCCCCAGA  100

seq1  AAAGAGTTTTTAAGAATTGAATGAAATTAAATAGACAACACATCAAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTTTTAAGAATTGAATGAAATTAAATAGACAACACATCAAACCT  150

seq1  TGGCAGGCAGTATTGAGACCTAATGCAATAAAAGCTTCCTACAGTGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGCAGTATTGAGACCTAATGCAATAAAAGCTTCCTACAGTGAATA  200

seq1  CATAAAGGAGATCTAAAGGAAATTGCCAGATAACGGCAAGACAGGCTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGGAGATCTAAAGGAAATTGCCAGATAACGGCAAGACAGGCTTAA  250

seq1  CTGGCCATCTCTTGTCAAACCCTGGTATTGCAAATGAAGCTTGCAATACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCATCTCTTGTCAAACCCTGGTATTGCAAATGAAGCTTGCAATACC  300

seq1  AGGGTTACGTTACATCTAATTGAGTTGTCAGCCAAAGGGGTATCATGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTACGTTACATCTAATTGAGTTGTCAGCCAAAGGGGTATCATGGCA  350

seq1  GTCCCCAAATAACCCAAGGTCTTCTCAAGATTGTGCATTGCTTTTCACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAAATAACCCAAGGTCTTCTCAAGATTGTGCATTGCTTTTCACAA  400

seq1  ATTGAGACAGGGCCCATTGCTGAAGATAACACATTACTTATTGAGCATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGACAGGGCCCATTGCTGAAGATAACACATTACTTATTGAGCATGG  450

seq1  AGAAGTTGGGCCGGTACCTACATAGAGCCTTCACCCCTATGTCTGCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTGGGCCGGTACCTACATAGAGCCTTCACCCCTATGTCTGCTACA  500

seq1  GGAAGTGCTCTGAATGCCACCAAAAGAGAAACAAACACCAAGCTCAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGCTCTGAATGCCACCAAAAGAGAAACAAACACCAAGCTCAGCAC  550

seq1  AACCCTTTGGATCTACATTAATATCCAGTCTGCAAGATATACGAGGGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTTGGATCTACATTAATATCCAGTCTGCAAGATATACGAGGGCAA  600

seq1  TATTGACACAAAGCCTGTGGGAGTATCCACCAGGCTCTGGTTGGTTG  647
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACACAAAGCCTGTGGGAGTATCCACCAGGCTCTGGTTGGTTG  647

seq1: chr14_22178645_22179791
seq2: B6Ng01-024M19.g_69_1198 (reverse)

seq1  TGCCATGCATGAATGGACGTGCTGTACTCTGGAGCAGGCAAACCTCCATG  50
      |||||| || |||||||||| ||||| |  ||||||||| |||||||| |
seq2  TGCCAT-CAAGAATGGACGT-CTGTAATTCGGAGCAGGC-AACCTCCA-G  46

seq1  TCAGTATTCTATCTCCTTAATCCCTCCTCCTTTGTGATTTTTTTTTTTTA  100
      |||| ||   |||||| ||||||||||||||||| ||    |||||||||
seq2  TCAGAAT--CATCTCCCTAATCCCTCCTCCTTTG-GA----TTTTTTTTA  89

seq1  TGTCAGATCTAAAATGGGGAGCCTTTTGTAAATACAGTGATTATCACGTG  150
      |||||||||| ||||||||||| |||||| ||||||||||| ||||||||
seq2  TGTCAGATCT-AAATGGGGAGCTTTTTGT-AATACAGTGATAATCACGTG  137

seq1  GATAATCACCTGCATCAGGAACCGCCCTGCCTCTCTCCTAGCCCTAGCTG  200
      |||||||| |||||||||| |||| ||||| | |||||||||||||||||
seq2  GATAATCA-CTGCATCAGG-ACCG-CCTGCTTTTCTCCTAGCCCTAGCTG  184

seq1  CTCCCCACATGTCACAGCCCCTTGGTGGCTGGATTTTAACCTGACTGCTT  250
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTCCCCACATGTCACAGCCCCTTGGTGGCTGGA-TTTAACCTGACTGCTT  233

seq1  CATTAGATTTGTGAAACGCAGTACGAGGAGGCGCCCTGGGGCAGCACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGATTTGTGAAACGCAGTACGAGGAGGCGCCCTGGGGCAGCACAGA  283

seq1  TGGGGACTTGCTTGTTTTCTTTTCTCACTTTCACGGCAATGGCACACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACTTGCTTGTTTTCTTTTCTCACTTTCACGGCAATGGCACACTAA  333

seq1  CAAGTCCTTTTCAATTTAGTGTGATCAGTTCACTTGGAATCACTCCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCTTTTCAATTTAGTGTGATCAGTTCACTTGGAATCACTCCTGAT  383

seq1  GCTTGGAACCTGCCTAACTTCTGCCCACCACCCGTGCTCACTCCTTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAACCTGCCTAACTTCTGCCCACCACCCGTGCTCACTCCTTCCCT  433

seq1  GTTTTCTGACCTAATACCTTTTCTCTCTGCTCTTTCATGTGGTGAATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTGACCTAATACCTTTTCTCTCTGCTCTTTCATGTGGTGAATCTG  483

seq1  AGAGCAAAAATCCTGCTTAAAATTCTTGCTGGGTCAACCTGTTCCCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAAAATCCTGCTTAAAATTCTTGCTGGGTCAACCTGTTCCCCTCT  533

seq1  GTTGTTTTGTTTGTTTTGCTAAGAGGGGAAAAATAAATGCCTTTCCATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTGTTTGTTTTGCTAAGAGGGGAAAAATAAATGCCTTTCCATCA  583

seq1  TTGTATCTACAAACACCTTCAGATCAGAGGTTAGTGTGACAGAGTCCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCTACAAACACCTTCAGATCAGAGGTTAGTGTGACAGAGTCCACA  633

seq1  GTGATGTGAGACAGCTGCCAGCTCTAATGGTGTGACTTGGGGCTCCAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTGAGACAGCTGCCAGCTCTAATGGTGTGACTTGGGGCTCCAGTC  683

seq1  CAAGATCAAAGGAAGGTGAGAGGAAGCCAGATGATAAGATCATTTTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCAAAGGAAGGTGAGAGGAAGCCAGATGATAAGATCATTTTAAGA  733

seq1  CACAGAACGAGGACTTAGCTGTTCTGATGATAGGGCACAGCTCAGCAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAACGAGGACTTAGCTGTTCTGATGATAGGGCACAGCTCAGCAAGC  783

seq1  CTGTGTGAAGAGGCACCAAGATAGAAAATTGAGTTGGCTTTTCCTAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGAAGAGGCACCAAGATAGAAAATTGAGTTGGCTTTTCCTAAGAA  833

seq1  TGTCCATCCTAAGCCAGAAATGTGCTGGTGCTTGCAACTGTTTACATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATCCTAAGCCAGAAATGTGCTGGTGCTTGCAACTGTTTACATATG  883

seq1  TGGAAATGTCCTGAGGCACCCCTTCCTTACAAGATAATGATTTGAAGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATGTCCTGAGGCACCCCTTCCTTACAAGATAATGATTTGAAGCCA  933

seq1  AGCACTGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGAC  983

seq1  AGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCGAGGGTGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCGAGGGTGG  1033

seq1  TTCTTCACTCCATGTGCTCTGCCTTCCTCGTGACGTCAACTCGGCCGATG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACTCCATGTGCTCTGCCTTCCTCGTGACGTCAACTCGGCCGATG  1083

seq1  GGCTGCAGCCAATCAGGGAGTGACACGTCCTAGGCGAAGGAGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAGCCAATCAGGGAGTGACACGTCCTAGGCGAAGGAGAATTC  1130