BAC Information

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BAC

Clone NameB6Ng01-024O14
Chromosome14 (Build37)
Map Location 114,158,708 - 114,261,075
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043509, Tpm3-rs7, LOC100043510
Downstream geneLOC382947, LOC668791, LOC100043821, LOC100043521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024O14.bB6Ng01-024O14.g
ACCDH856406DH856407
length1,1041,103
definitionDH856406|Mus musculus domesticus DNA, BAC clone: B6Ng01-024O14, 5' end.DH856407|Mus musculus domesticus DNA, BAC clone: B6Ng01-024O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,259,963 - 114,261,075)(114,158,708 - 114,159,815)
sequence
gaattcagagaaagaaacagatattaacacttgggtgtactaaagattct
tgtatttactgcagtctgaaacaaggcttgaggattcttttctttttttt
aagatttatttatttatgtatgtgagcacattgtagtggtcctcagacac
acaagaagagggcattggctacctttacaggttgtgagccaccatgtggt
tgctgagaattgaactcagaacctctgcaagagcagttagtgatcttaac
cactgagtcatctctcccacccccaaggttggagtctatcatgagataga
ctttaatgtatatttaagtacaaggattagggagggactgaagtgctgag
aaaggagagagaatagagttaggtgtccccaaagcatctggagggtgtgc
ttaatgaaaggggttagttaaacatttatacaattttagaacattatgaa
gttacaccgtttacaaagttcttttagtaaataagattatagtttgttcc
ctgcagtatgcaggacaatatttcaggttaacaaaatgaaagaaatcctt
actgtacaaggtcacaaggagttaccatgcatgtgtacatgtgttcactg
taaataaaactgatggtcttctgaaactttcagatattgcaggttacagc
tgggaaggagtcaggtcatactcaagggtaacttgtctaggcctcaagta
tctttttttatgttttaaaattcatacttatagtgcctctgattataaaa
ataattgactctaatcatgtaatatttgttgaacactatgttgcacacaa
ctctaggtaatttagtatcaataggattgtgtatttttctatggtgaaat
ggaatatgcagtactctatatgagctgttcatacagtattttattcacac
taattttatggtatatcaacttctaaatttctccttaaattgaattgggg
gaagattttcaatatgttgctatggatttatatctatatcatgataacca
tatatatgtgaaacactaaactggtatatatacacttttacacaattcag
acatgaagtgtatttttatcaagctcttatggaaatacatttttttgcgg
agca
gaattcaaatttgggcctgtcactgaatgcactcctaagaagaaaatcta
cagcaccatgtacctatgtcaataaatgtgattgattgcagagtagttaa
ttaattaatcattatattcataattaattatgtagctgaagggcaaggaa
aaacaaaatatccctcaaaagtaaatggaaaagataatcaaaatcaaagc
tgaaattaatgtaacagaaacaagaaacagaaaataggaagcttcaatga
aataagattttgttctttggaaatattgagcatctttttgataaactgac
taaaatcataaggacatacttttttaaaaaaatccatgtttcaccaaata
gaaaaatctaagagaattagattaatttccatatatatatatatatgtac
tatgtatgtatgtatgtgtatatatattcatttatacagtcagagtgtag
acttggaggtggataaaatatattataaagatttaaattaatatttaaaa
attactggcaataataccaaggaattaaaaggcatatagaagaaaacttt
aaaacactgaagacaggactaaaagaaaacactagtctgtggaattatta
aatttgatattattaaaatgggcatcctactaaacctactctgcaaattc
aatgtaatgtcttctaaagaccagtattattttcttcagaactagaaaaa
aaatctttaaacaatttatatggatgtatatggaagccacaaagtctagc
aaaaacaaaaaatccttcccaaaaagaatattgctgaaggtatcaattta
agtaatactcaagaataatagtggccatatttgaaataccaaagtaagaa
gttcacccctactatcatggctactgtaatcatgggcatttgccctaaac
caggactttcacattgtaatcatcaacttcatcttcaaaaaaattataat
tagatattagtgatacttcagattacatactattgtactaaatattttac
atgccattaagatgatggccttaagaatacattttttctatagaggaact
acatgtctatttaacaataaactcaatactgctgttcatcaccaagtagt
cag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114259963_114261075
seq2: B6Ng01-024O14.b_47_1150 (reverse)

seq1  TGCTCCGCAAAAAAATGTAGTTTTCCATAAGAGCTTGAT-AAAATACAAA  49
      |||||||||||||||||||  |||||||||||||||||| ||||||||  
seq2  TGCTCCGCAAAAAAATGTA--TTTCCATAAGAGCTTGATAAAAATACA--  46

seq1  TTTCCATGTTCTGATTTGTGTAAAAGTGTATATATACCAGTTTAGTGTTT  99
        | |||| ||||| |||||||||||||||||||||||||||||||||||
seq2  -CTTCATG-TCTGAATTGTGTAAAAGTGTATATATACCAGTTTAGTGTTT  94

seq1  CACATATATATGGTTATCATGATATAGATATTAAATCCATAAGCAACATA  149
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  CACATATATATGGTTATCATGATATAGATA-TAAATCCAT-AGCAACATA  142

seq1  TTTGAAAATCTTCCCCCAATTCAATTTTAAGGAGAAATTTAGAAGTTGAT  199
       ||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  -TTGAAAATCTTCCCCCAATTCAA-TTTAAGGAGAAATTTAGAAGTTGAT  190

seq1  ATACCATAAAATTAGTGTGAATAAAATACTGTATGAACAGCTCATATAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATAAAATTAGTGTGAATAAAATACTGTATGAACAGCTCATATAGA  240

seq1  GTACTGCATATTCCATTTCACCATAGAAAAATACACAATCCTATTGATAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGCATATTCCATTTCACCATAGAAAAATACACAATCCTATTGATAC  290

seq1  TAAATTACCTAGAGTTGTGTGCAACATAGTGTTCAACAAATATTACATGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACCTAGAGTTGTGTGCAACATAGTGTTCAACAAATATTACATGA  340

seq1  TTAGAGTCAATTATTTTTATAATCAGAGGCACTATAAGTATGAATTTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTCAATTATTTTTATAATCAGAGGCACTATAAGTATGAATTTTAA  390

seq1  AACATAAAAAAAGATACTTGAGGCCTAGACAAGTTACCCTTGAGTATGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAAAAAAGATACTTGAGGCCTAGACAAGTTACCCTTGAGTATGAC  440

seq1  CTGACTCCTTCCCAGCTGTAACCTGCAATATCTGAAAGTTTCAGAAGACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCCTTCCCAGCTGTAACCTGCAATATCTGAAAGTTTCAGAAGACC  490

seq1  ATCAGTTTTATTTACAGTGAACACATGTACACATGCATGGTAACTCCTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTTTATTTACAGTGAACACATGTACACATGCATGGTAACTCCTTG  540

seq1  TGACCTTGTACAGTAAGGATTTCTTTCATTTTGTTAACCTGAAATATTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTGTACAGTAAGGATTTCTTTCATTTTGTTAACCTGAAATATTGT  590

seq1  CCTGCATACTGCAGGGAACAAACTATAATCTTATTTACTAAAAGAACTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATACTGCAGGGAACAAACTATAATCTTATTTACTAAAAGAACTTT  640

seq1  GTAAACGGTGTAACTTCATAATGTTCTAAAATTGTATAAATGTTTAACTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACGGTGTAACTTCATAATGTTCTAAAATTGTATAAATGTTTAACTA  690

seq1  ACCCCTTTCATTAAGCACACCCTCCAGATGCTTTGGGGACACCTAACTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTTCATTAAGCACACCCTCCAGATGCTTTGGGGACACCTAACTCT  740

seq1  ATTCTCTCTCCTTTCTCAGCACTTCAGTCCCTCCCTAATCCTTGTACTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCTCCTTTCTCAGCACTTCAGTCCCTCCCTAATCCTTGTACTTA  790

seq1  AATATACATTAAAGTCTATCTCATGATAGACTCCAACCTTGGGGGTGGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACATTAAAGTCTATCTCATGATAGACTCCAACCTTGGGGGTGGGA  840

seq1  GAGATGACTCAGTGGTTAAGATCACTAACTGCTCTTGCAGAGGTTCTGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGACTCAGTGGTTAAGATCACTAACTGCTCTTGCAGAGGTTCTGAG  890

seq1  TTCAATTCTCAGCAACCACATGGTGGCTCACAACCTGTAAAGGTAGCCAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTCTCAGCAACCACATGGTGGCTCACAACCTGTAAAGGTAGCCAA  940

seq1  TGCCCTCTTCTTGTGTGTCTGAGGACCACTACAATGTGCTCACATACATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCTTCTTGTGTGTCTGAGGACCACTACAATGTGCTCACATACATA  990

seq1  AATAAATAAATCTTAAAAAAAAGAAAAGAATCCTCAAGCCTTGTTTCAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATCTTAAAAAAAAGAAAAGAATCCTCAAGCCTTGTTTCAGA  1040

seq1  CTGCAGTAAATACAAGAATCTTTAGTACACCCAAGTGTTAATATCTGTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTAAATACAAGAATCTTTAGTACACCCAAGTGTTAATATCTGTTT  1090

seq1  CTTTCTCTGAATTC  1113
      ||||||||||||||
seq2  CTTTCTCTGAATTC  1104

seq1: chr14_114158708_114159815
seq2: B6Ng01-024O14.g_71_1173

seq1  GAATTCAAATTTGGGCCTGTCACTGAATGCACTCCTAAGAAGAAAATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTTGGGCCTGTCACTGAATGCACTCCTAAGAAGAAAATCTA  50

seq1  CAGCACCATGTACCTATGTCAATAAATGTGATTGATTGCAGAGTAGTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCATGTACCTATGTCAATAAATGTGATTGATTGCAGAGTAGTTAA  100

seq1  TTAATTAATCATTATATTCATAATTAATTATGTAGCTGAAGGGCAAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAATCATTATATTCATAATTAATTATGTAGCTGAAGGGCAAGGAA  150

seq1  AAACAAAATATCCCTCAAAAGTAAATGGAAAAGATAATCAAAATCAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATATCCCTCAAAAGTAAATGGAAAAGATAATCAAAATCAAAGC  200

seq1  TGAAATTAATGTAACAGAAACAAGAAACAGAAAATAGGAAGCTTCAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAATGTAACAGAAACAAGAAACAGAAAATAGGAAGCTTCAATGA  250

seq1  AATAAGATTTTGTTCTTTGGAAATATTGAGCATCTTTTTGATAAACTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGATTTTGTTCTTTGGAAATATTGAGCATCTTTTTGATAAACTGAC  300

seq1  TAAAATCATAAGGACATACTTTTTTAAAAAAATCCATGTTTCACCAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATAAGGACATACTTTTTTAAAAAAATCCATGTTTCACCAAATA  350

seq1  GAAAAATCTAAGAGAATTAGATTAATTTCCATATATATATATATATGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATCTAAGAGAATTAGATTAATTTCCATATATATATATATATGTAC  400

seq1  TATGTATGTATGTATGTGTATATATATTCATTTATACAGTCAGAGTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGTATGTATGTGTATATATATTCATTTATACAGTCAGAGTGTAG  450

seq1  ACTTGGAGGTGGATAAAATATATTATAAAGATTTAAATTAATATTTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGAGGTGGATAAAATATATTATAAAGATTTAAATTAATATTTAAAA  500

seq1  ATTACTGGCAATAATACCAAGGAATTAAAAGGCATATAGAAGAAAACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGGCAATAATACCAAGGAATTAAAAGGCATATAGAAGAAAACTTT  550

seq1  AAAACACTGAAGACAGGACTAAAAGAAAACACTAGTCTGTGGAATTATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTGAAGACAGGACTAAAAGAAAACACTAGTCTGTGGAATTATTA  600

seq1  AATTTGATATTATTAAAATGGGCATCCTACTAAACCTACTCTGCAAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGATATTATTAAAATGGGCATCCTACTAAACCTACTCTGCAAATTC  650

seq1  AATGTAATGTCTTCTAAAGACCAGTATTATTTTCTTCAGAACTAGAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATGTCTTCTAAAGACCAGTATTATTTTCTTCAGAACTAGAAAAA  700

seq1  AAATCTTTAAACAATTTATATGGATGTATATGGAAGCCACAAAGTCTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTAAACAATTTATATGGATGTATATGGAAGCCACAAAGTCTAGC  750

seq1  AAAAACAAAAAATCCTTCCCAAAAAGAATATTGCTGAAGGTATCAATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAAATCCTTCCCAAAAAGAATATTGCTGAAGGTATCAATTTA  800

seq1  AGTAATACTCAAGAATAATAGTGGCCATA-TTGAAATACCAAAGTAAGAA  849
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGTAATACTCAAGAATAATAGTGGCCATATTTGAAATACCAAAGTAAGAA  850

seq1  GTTCACCCCTACTATCATGGCTACTGTAATCATGGGCATTTGCCCTAAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACCCCTACTATCATGGCTACTGTAATCATGGGCATTTGCCCTAAAC  900

seq1  CAGGACTTTCACATTGTAATCATCAAACTTCATCTTCAAAAAAAATTATT  949
      |||||||||||||||||||||||| |||||||||||| |||||||||| |
seq2  CAGGACTTTCACATTGTAATCATC-AACTTCATCTTC-AAAAAAATTA-T  947

seq1  AATAAGATATTAGTGGATACTTCAGAATACATACTATTGTACTAAATTAA  999
      ||| |||||||||| ||||||||||| ||||||||||||||||||||  |
seq2  AATTAGATATTAGT-GATACTTCAGATTACATACTATTGTACTAAAT--A  994

seq1  TTTTACATGCCATTAAAGATGATTGCCTTAAG-ATACATTTTTCTTATAG  1048
      |||||||||||||| |||||||| |||||||| ||||||||||  |||||
seq2  TTTTACATGCCATT-AAGATGATGGCCTTAAGAATACATTTTTTCTATAG  1043

seq1  A-GAACTACATGTCTATTTAACAATAACTTCCATACTGCTGTTCATCACC  1097
      | |||||||||||||||||||||||||  || ||||||||||||||||||
seq2  AGGAACTACATGTCTATTTAACAATAAACTCAATACTGCTGTTCATCACC  1093

seq1  AAGGAAGTCAG  1108
      || | ||||||
seq2  AA-GTAGTCAG  1103