BAC Information

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BAC

Clone NameB6Ng01-025D20
Chromosome14 (Build37)
Map Location 27,387,443 - 27,388,333
singlet/doubletsinglet
Overlap genenone
Upstream geneZmiz1, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279
Downstream geneA630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025D20.bB6Ng01-025D20.g
ACCDH856649DH856650
length1,265868
definitionDH856649|Mus musculus domesticus DNA, BAC clone: B6Ng01-025D20, 5' end.DH856650|Mus musculus domesticus DNA, BAC clone: B6Ng01-025D20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaacctgccaaatggtgctaactctcaacttttttgcatgactg
tttcgggaagtattaaaaactacaggctttccgtgctactgccaggaaac
tcttggccccggtgcggtccgctagctctgtctctatctagcgcccccag
cgactaatcgctgtgttcccagttctggttcccctgtcccttcccacatt
ccagtaaccaagtagaaccaccaagtccccaggctccatccagatacttt
ctgccctggcatgatcccaccgggctactctctgcctgccaactctccgg
cgggtctggagctcccgagttccctttgctgccacaaagtcagccgccac
aacacccagcaacccagtaaaaacaaaattctagaagcttataattaacc
aaacagatttatgtatcaataaattctcaattcacaagatggcaatacaa
taacttcagaaccaattgagaatgataaaagctgcccacctagattagac
aaattatcccaattattctatcctttatgctgtcataactacctgtggct
atttaaagccacgctggttcaggttcttcttcctgtccctccaactccat
cttggcttctctttctcccccattccccagaccctgtctctgcaactctt
agctctgcctccctttccccttctctaatcacaggcctcctgctgcacta
atattttaatgtgattggacagggaaaatcctgtcacacatgacccctgc
aattctgcagccttcatgctgccaaaaccagttccacaaggaatcatttt
acatattaacaagtttagctaaagattatagtcttggctccttccaggag
cttctaagtgctaaccctgaggaaacaggtcccagaaaatttcacctcgg
tgttcctagactcttattatcacagctgttttgtttgttttttgttcttt
ttcaaacccagaagaccagcatctattatatcacttagtaaaggttttgc
aatgggtttgtatatccttggaccaggagtgcacctatctggagggtgtg
gccttgttgatagtgtgacctggtgatgggtgtgtcactatgagtgtgaa
taagatcctaccttattggctggagtcagtcttcacatgcaggcttgatg
aaggcatggacttcagcttgcctatgcatgcctggccaagaactgcatgt
cactgtagataggacgtacccttgaccttaaaccatcccagaaataggtg
ttttttttagacgac
gaattcttgtgtttgcaaggcaaacatgtactactaagctacatctctag
cctcattgtgtttattattattatcttattattattaataagaactttat
ttatttattttgtttatttatattgttttctatagacactccattatttt
acattcctgtaaacaatccaagcccaaactggtcattgcttgatttgctt
cccttcttttctattttcactttttttcttaatagccagcctagtagatg
tgaaataatgtccacttgtgggtttttgttttgttttggggttttgattg
tttgtttgtgttgagatagggtctctctatgtagtcctggctatgctaga
actcatcatgtagatcagtctcaaattcacagagatcctcctgcctcggt
ctcatgagtgttgagtgaaaacttgtgccacggtgacttgcctactcatc
atgctttgaatttgcattattaatacagagactcttctcacgtgctcaaa
tggccctttgtatatctcctttggaaaacattctatttaagttgtttgca
caattttcaattagcttcagctgccaatatgatgcagacctggaatcatc
caggaagctggatcctcagctgaagaacttcctcaatgaggatggcttat
ggggatgactgtaggacctttctctttgcttatgggggatgagtgtagga
ccttctcttgcttatgggggatgactgtagggacccttctctttgcttat
ggggatgactgtaggaccttctcttgcttatgggggatgactttatgacc
ttctcttgctttgggaatggttgtaggaccttctcttgcttatggggatg
agtgtaggacctttctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_27387443_27388333
seq2: B6Ng01-025D20.g_69_936

seq1  GAATTCTTGTGTTTGCAAGGCAAACATGTACTACTAAGCTACATCTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGTTTGCAAGGCAAACATGTACTACTAAGCTACATCTCTAG  50

seq1  CCTCATTGTGTTTATTATTATTATCTTATTATTATTAATAAGAACTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTGTGTTTATTATTATTATCTTATTATTATTAATAAGAACTTTAT  100

seq1  TTATTTATTTTGTTTATTTATATTGTTTTCTATAGACACTCCATTATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTTGTTTATTTATATTGTTTTCTATAGACACTCCATTATTTT  150

seq1  ACATTCCTGTAAACAATCCAAGCCCAAACTGGTCATTGCTTGATTTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCTGTAAACAATCCAAGCCCAAACTGGTCATTGCTTGATTTGCTT  200

seq1  CCCTTCTTTTCTATTTTCACTTTTTTTCTTAATAGCCAGCCTAGTAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTTTTCTATTTTCACTTTTTTTCTTAATAGCCAGCCTAGTAGATG  250

seq1  TGAAATAATGTCCACTTGTGGGTTTTTGTTTTGTTTTGGGGTTTTGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAATGTCCACTTGTGGGTTTTTGTTTTGTTTTGGGGTTTTGATTG  300

seq1  TTTGTTTGTGTTGAGATAGGGTCTCTCTATGTAGTCCTGGCTATGCTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTGTTGAGATAGGGTCTCTCTATGTAGTCCTGGCTATGCTAGA  350

seq1  ACTCATCATGTAGATCAGTCTCAAATTCACAGAGATCCTCCTGCCTCGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCATGTAGATCAGTCTCAAATTCACAGAGATCCTCCTGCCTCGGT  400

seq1  CTCATGAGTGTTGAGTGAAAACTTGTGCCACGGTGACTTGCCTACTCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAGTGTTGAGTGAAAACTTGTGCCACGGTGACTTGCCTACTCATC  450

seq1  ATGCTTTGAATTTGCATTATTAATACAGAGACTCTTCTCACGTGCTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTGAATTTGCATTATTAATACAGAGACTCTTCTCACGTGCTCAAA  500

seq1  TGGCCCTTTGTATATCTCCTTTGGAAAACATTCTATTTAAGTTGTTTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTTTGTATATCTCCTTTGGAAAACATTCTATTTAAGTTGTTTGCA  550

seq1  CAATTTTCAATTAGCTTCAGCTGCCAATATGATGCAGACCTGGAATCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTCAATTAGCTTCAGCTGCCAATATGATGCAGACCTGGAATCATC  600

seq1  CAGGAAGCTGGATCCTCAGCTGAAGAACTTCCTCAATGAGGATGGCTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGCTGGATCCTCAGCTGAAGAACTTCCTCAATGAGGATGGCTTAT  650

seq1  GGGGATGACTGTAGGACC-TTCTC-TTGCTTAT-GGGGATGAGTGTAGGA  697
      |||||||||||||||||| ||||| |||||||| ||||||||||||||||
seq2  GGGGATGACTGTAGGACCTTTCTCTTTGCTTATGGGGGATGAGTGTAGGA  700

seq1  CCTTCTCTTGCTTAT-GGGGATGACTGTAGG--ACCTTCTC-TTGCTTAT  743
      ||||||||||||||| |||||||||||||||   ||||||| ||||||||
seq2  CCTTCTCTTGCTTATGGGGGATGACTGTAGGGACCCTTCTCTTTGCTTAT  750

seq1  GGGGATGACTGTAGGACCTTCTCTTGCTTAT-GGGGATGACTGTAGGACC  792
      ||||||||||||||||||||||||||||||| |||||||||| || ||||
seq2  GGGGATGACTGTAGGACCTTCTCTTGCTTATGGGGGATGACTTTATGACC  800

seq1  TTCTCTTGCTTATGGGAATGGTTGTAGGACCTTCTCTTGCTTATGGGGAT  842
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTGCTT-TGGGAATGGTTGTAGGACCTTCTCTTGCTTATGGGGAT  849

seq1  GAGTGTAGGACC-TTCTCTTGCTTATGGGGATGAGTGTAGGACCTTCTCT  891
      |||||||||||| ||||||                               
seq2  GAGTGTAGGACCTTTCTCT-------------------------------  868