BAC Information

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BAC

Clone NameB6Ng01-025L08
Chromosome14 (Build37)
Map Location 77,303,350 - 77,304,485
singlet/doubletsinglet
Overlap genenone
Upstream geneGtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik, Tsc22d1, 2810032E02Rik, LOC100043753
Downstream geneLOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678, Gm1587, Dnajc15, Epsti1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025L08.bB6Ng01-025L08.g
ACCDH856967DH856968
length1,1151,020
definitionDH856967|Mus musculus domesticus DNA, BAC clone: B6Ng01-025L08, 5' end.DH856968|Mus musculus domesticus DNA, BAC clone: B6Ng01-025L08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattagaatacacttcttggctcagtccctagagtgtatgactca
gactgggttccaagaaattgtatctctaacaagtttccagatagtgctgc
tgctgctgttgctgctgctagcctgaggaccccaccctgggaatcccagc
tgatgttaaggtccagatacctgtgaggtagggccacagttatcaacaca
gtctggtttacctgggactttctcagttctaggacagaaaaaaaaattgc
atattttaagaactctcctactaggggcaaaacctgaatatttgatcact
ctaggtgagattaatacttctactttaagcagaaatttggccaccctaat
acttctgaaaaatattttcaagctgtagtgtaacttcatgtttagattat
caatgggattttaaaccagtaggctttaatcatgaatgaacttgtggtat
cctgcgttagcagggataagattttttctgatatcccaaagccctgtgtg
gccctgatgtatatcccccacctcacttcattttattaagaattatagtt
agtacttacaggaaaagtaaactcacagagcttatgggtgacacggtaga
tactcttcctttagctcccaggttcacatgactcttaacaccaaatttgc
attcttcccagaagctctgagtgggtgtttgctaccctggggcctgagta
aatatagtcaaggcttgtatataaaggatgactatttaaagtcactaatt
ccaaaatggtaatgagcatcaccatgtaaacagaagtatcactgtaagtt
actgaaataagatgagagaaccaggaagagatagattatgttcttgaagg
taaagagaagttttcaaaaccaatttcacatgaataagaaacttgacatg
gactaaagcttggaggattcatttagctatatgtgtctctgtacgctatt
ccatgaccatcatcgttacccactgtaggaagagtctgccttcttctctg
cagctattctgacgtatcgtctgtcttctattatgggccagttccggttc
tgatctttagatggatcaggggttctggatatgctgctctatgcctcttc
ctatgggagctgcta
gaattctcacctgaggaataccgaatggctgagaagcacttgaaaaaaat
gttcagcatccttaatcatcagggaaatgcaaatcaaagcaaccctgaga
ttccacctcacactagtcagaatggctaggatcaaaaattcaggtgacag
cagatgctgccgaggatgtggagaaagaggaacactcctccattgttggt
gggattggaagcttgtacaaccactctggaaatcagtctggcagttcctc
agaaaattggatatagtactaccagaggatcccgcaatacctctcctggg
catatatccagaagatgtcccaacctgtaagaaggacacatgctccacta
tgttcatagcagttttatttataatagccagaagctggaaagaacccaga
tgtccctcaacagaggaatggatacagaaaatgtgttacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggta
aatggatggacctggagggcatcatcctgagtgaggtaacccaatcacaa
aagaactcacacagtatgtactcactgataagtggatattagtccagaaa
cttagaatacccaagatataagatgcaatttgcaaaacccaggaaactca
agaagaacgaagaccaaagtgtggacacttttccccttcttagaattggg
aacaaaacacccatggaaggagttacagagacaaagtttggagctgagat
gaaaggatggaccatctagagactgccatacctggggatccatcccataa
tcaacctccaaatgctgacatcattgcatacactagcaagattttgctga
aaggacccagatatagctgtctcttgggagctatgttggggcctagcaaa
cacagaagtggatgctcacagtcagctattggatggatcacgtgttctca
atggaggtgtagagaagtaccaaggagttaatggatctgcaccttttagg
ttgaacaacattatgaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77303350_77304485
seq2: B6Ng01-025L08.b_47_1161

seq1  GAATTCATTAGAATACACTTCTTGGCTCAGTCCCTAGAGTGTATGACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGAATACACTTCTTGGCTCAGTCCCTAGAGTGTATGACTCA  50

seq1  GACTGGGTTCCAAGAAATTGTATCTCTAACAAGTTTCCAGATAGTGCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGTTCCAAGAAATTGTATCTCTAACAAGTTTCCAGATAGTGCTGC  100

seq1  TGCTGCTGTTGCTGCTGCTAGCCTGAGGACCCCACCCTGGGAATCCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGTTGCTGCTGCTAGCCTGAGGACCCCACCCTGGGAATCCCAGC  150

seq1  TGATGTTAAGGTCCAGATACCTGTGAGGTAGGGCCACAGTTATCAACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTAAGGTCCAGATACCTGTGAGGTAGGGCCACAGTTATCAACACA  200

seq1  GTCTGGTTTACCTGGGACTTTCTCAGTTCTAGGACAGAAAAAAAAATTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTTTACCTGGGACTTTCTCAGTTCTAGGACAGAAAAAAAAATTGC  250

seq1  ATATTTTAAGAACTCTCCTACTAGGGGCAAAACCTGAATATTTGATCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAAGAACTCTCCTACTAGGGGCAAAACCTGAATATTTGATCACT  300

seq1  CTAGGTGAGATTAATACTTCTACTTTAAGCAGAAATTTGGCCACCCTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGAGATTAATACTTCTACTTTAAGCAGAAATTTGGCCACCCTAAT  350

seq1  ACTTCTGAAAAATATTTTCAAGCTGTAGTGTAACTTCATGTTTAGATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGAAAAATATTTTCAAGCTGTAGTGTAACTTCATGTTTAGATTAT  400

seq1  CAATGGGATTTTAAACCAGTAGGCTTTAATCATGAATGAACTTGTGGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGATTTTAAACCAGTAGGCTTTAATCATGAATGAACTTGTGGTAT  450

seq1  CCTGCGTTAGCAGGGATAAGATTTTTTCTGATATCCCAAAGCCCTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCGTTAGCAGGGATAAGATTTTTTCTGATATCCCAAAGCCCTGTGTG  500

seq1  GCCCTGATGTATATCCCCCACCTCACTTCATTTTATTAAGAATTATAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGATGTATATCCCCCACCTCACTTCATTTTATTAAGAATTATAGTT  550

seq1  AGTACTTACAGGAAAAGTAAACTCACAGAGCTTATGGGTGACACGGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTACAGGAAAAGTAAACTCACAGAGCTTATGGGTGACACGGTAGA  600

seq1  TACTCTTCCTTTAGCTCCCAGGTTCACATGACTCTTAACACCAAATTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTCCTTTAGCTCCCAGGTTCACATGACTCTTAACACCAAATTTGC  650

seq1  ATTCTTCCCAGAAGCTCTGAGTGGGTGTTTGCTACCCTGGGGCCTGAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCCCAGAAGCTCTGAGTGGGTGTTTGCTACCCTGGGGCCTGAGTA  700

seq1  AATATAGTCAAGGCTTGTATATAAAGGATGACTATTTAAAGTCACTAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGTCAAGGCTTGTATATAAAGGATGACTATTTAAAGTCACTAATT  750

seq1  CCAAAATGGTAATGAGCATCACCATGTAAACAGAAGTATCACTGTAAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATGGTAATGAGCATCACCATGTAAACAGAAGTATCACTGTAAGTT  800

seq1  ACTGAAATAAGATGAGAGAACCAGGAAGAGATAGAGTTATGTTCTTGAAG  850
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACTGAAATAAGATGAGAGAACCAGGAAGAGATAGA-TTATGTTCTTGAAG  849

seq1  GTAAAGAGAAGTTATCAAAACCAATTTCACATGAATAAGAAACTTGACAT  900
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAGAAGTTTTCAAAACCAATTTCACATGAATAAGAAACTTGACAT  899

seq1  GGACTAAAGCTTGGAGGAATTCATTTAGCTATAATGTGATCTCTGTACGC  950
      ||||||||||||||||| |||||||||||||| ||||| |||||||||||
seq2  GGACTAAAGCTTGGAGG-ATTCATTTAGCTAT-ATGTG-TCTCTGTACGC  946

seq1  TATTTCAATGACCATCAATCGTTACTCACTGTAGGAAGAGTCTGCCTTCC  1000
      || ||| ||||||||| |||||||| |||||||||||||||||||||| |
seq2  TA-TTCCATGACCATC-ATCGTTACCCACTGTAGGAAGAGTCTGCCTT-C  993

seq1  TTCTCCTGCAGCTATTCTGACGTATCGTCTGTTCTTTCTAATTATGGGCA  1050
      |||| |||||||||||||||||||||||||||   |||| ||||||||| 
seq2  TTCT-CTGCAGCTATTCTGACGTATCGTCTGT--CTTCT-ATTATGGGCC  1039

seq1  AGTTTCGGGTTCTGATCTTTTAGATGGATCAGGGGGTTCTGGGAATAATG  1100
      || ||| |||||||||| ||||||||||||| ||||||||||  || |||
seq2  AG-TTCCGGTTCTGATC-TTTAGATGGATCA-GGGGTTCTGG--AT-ATG  1083

seq1  CTGCCTCTATTGCTTCTTCCTACTGGGAAGCTGCTA  1136
      ||| ||||| ||| |||||||| |||| ||||||||
seq2  CTG-CTCTA-TGCCTCTTCCTA-TGGG-AGCTGCTA  1115