BAC Information

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BAC

Clone NameB6Ng01-029J07
Chromosome14 (Build37)
Map Location 103,861,430 - 103,862,558
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC669278, Kctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1, LOC100043797
Downstream geneScel, LOC100043448, Slain1, Ednrb, Pou4f1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029J07.bB6Ng01-029J07.g
ACCDH859744DH859745
length1,1421,108
definitionDH859744|Mus musculus domesticus DNA, BAC clone: B6Ng01-029J07, 5' end.DH859745|Mus musculus domesticus DNA, BAC clone: B6Ng01-029J07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccgaaaaaaggccgagaaacacctgaaaaa
atgttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctga
gattccatctcacaccagtcagaatggctaagataaaaaattcaggtgac
agcagatgctggcgaggatgtggagaaagaggaacactcctccattgttg
gtgggattgcaagcttgtacaaccactctggaaatcagtctggcggttcc
tcagaaaattggacatagtactactggaggatcccgcaatacctctcctg
ggcatatatccagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccaaat
gcccctcaacagaggaatggatgcaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatgtatgaaattcctaggaaa
atggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgaaatgtactcactgataagtggatattagcccagaaac
ttagtatagcgagatataaggtacaatatgcaaaacacatgaaactgaag
aagaatgaagaccaaagtgtggacactttgctccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggccatctagagactgccatatccagggatccatcccataattag
cctccaaacgctgacaccactgcatacactagcaagattttgctgaaagg
atcctgatatagctgtctcttgtgagactaggactacacagaagtggatg
ctcacagtcaactattggatggatcacagggctcccaatggaggagctag
agaaagtatccaggagctaagagatctgcatcctatcggtggatacttta
tgactatcagtatcagagctctgacttagctgcatatgtatcaaagatgg
cctgtcagcatcactgaaagaaagcccattgttagcaactttaatggtcc
atacaggaacgcaaggtcaaaaatggaatgggtggtagggag
gaattccttattatctgaaataattctcttaaaaacctccacagtttcaa
ttgtcaatcatacgtacacatacaccccaatacacatacctatcagacat
aggttagatgagtcttcagacttggtatacttctcactcactgcacagtg
ccgtgtctagcattcagtgagtaaccaggacagtcagcgaatgagaacgt
gcgcaaactcagagcgtacagcgaggcatgccaatatttgatcttgttgg
tcttggggtgcctcccaagaatgaggtgatctcgtgtgataacaggggac
ttgtgtcataaagccagagctgaggggaaagctggggagaggtcggaatg
aggtggacagaggggagaaaagaaaggctttctgtgagctcctgctagaa
acacgctcagcggctgagggacacagtagagaaacatctgtgctcctctt
ttgtatttcggcatcccaaagagacacattaagccgaaggccattcttac
tgggcttcctaagccatttgagatgtaacaaggtgttagatctgtgatac
ttatctcccagtggtggtgtgaggattaaaatggattaaagtacataatg
tctgtagcatgctgctacagaacaagcattagccttggctgcttggagcc
cttctctctgggactcttcagcatggccttctggacactccatccttttc
agcatctgcacttgtctggagtaatcccctgttgctgcatctttccgttt
gcctccctgcttctctgattccccatttagaacaaagcttccaaaatgag
ctcccctccgtaagtggttggcccgccataatccaattacagacactgct
cggtccaaagccactatgagttttctaatgtcagaaccagaagcacctcc
agaatcttctgtcttgcggcatctcacgttctttagtgctcatatttgaa
ttcctatttcttggttataagacaacacacttgacagtctcctctccctg
ggtggcactcacatttcatctctgcatgcttcttaaactgactttagggt
ggcagttcctacccaaggctttaaacctttctttcttcaaatccatcatg
tctatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_103861430_103862558
seq2: B6Ng01-029J07.g_69_1176 (reverse)

seq1  AAAATAGACATGGATGAGAATATTGAAGGAAGAGAAGTTTAAAAGGCCAT  50
      ||||||||||| |||| ||   |||||| |||| | |||||||  ||| |
seq2  AAAATAGACAT-GATG-GA--TTTGAAGAAAGAAAGGTTTAAA--GCCTT  44

seq1  GGGTTAAGGAACTGCAACACTTAAAAGTCAAGTTTAAGAAGCATTGCAGA  100
      ||||  ||||||||| || ||  |||||| ||||||||||||| ||||||
seq2  GGGT--AGGAACTGCCACCCT--AAAGTC-AGTTTAAGAAGCA-TGCAGA  88

seq1  GATGAAATGTGGAGTGGCCACACCAGGGGAGAGGAGACTTGTCAGGTGTG  150
      |||||||||| |||| ||||| ||| |||||||||||| ||||| |||||
seq2  GATGAAATGT-GAGT-GCCAC-CCA-GGGAGAGGAGAC-TGTCAAGTGTG  133

seq1  GTGTCTGTATGACCAAGAAAAGGGAATTCAAATAATGAGCACTAAAGAAC  200
       ||||| ||| |||||||||  ||||||||||| ||||||||||||||||
seq2  TTGTCT-TATAACCAAGAAATAGGAATTCAAAT-ATGAGCACTAAAGAAC  181

seq1  GTGGGATGCCGCAAAGACAGAAGATTCTGGAGGTGCTTCTGGTTTCTGAC  250
      ||| |||||||| ||||||||||||||||||||||||||||| |||||||
seq2  GTGAGATGCCGC-AAGACAGAAGATTCTGGAGGTGCTTCTGG-TTCTGAC  229

seq1  ATTAGGAAACTCATAGTGGCTTTGGACCGAGCAGTGTCTGTAATTGGATT  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAAACTCATAGTGGCTTTGGACCGAGCAGTGTCTGTAATTGGATT  279

seq1  ATGGCGGGCCAACCACTTACGGAGGGGAGCTCATTTTGGAAGCTTTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCGGGCCAACCACTTACGGAGGGGAGCTCATTTTGGAAGCTTTGTTC  329

seq1  TAAATGGGGAATCAGAGAAGCAGGGAGGCAAACGGAAAGATGCAGCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGGGAATCAGAGAAGCAGGGAGGCAAACGGAAAGATGCAGCAACA  379

seq1  GGGGATTACTCCAGACAAGTGCAGATGCTGAAAAGGATGGAGTGTCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTACTCCAGACAAGTGCAGATGCTGAAAAGGATGGAGTGTCCAGA  429

seq1  AGGCCATGCTGAAGAGTCCCAGAGAGAAGGGCTCCAAGCAGCCAAGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATGCTGAAGAGTCCCAGAGAGAAGGGCTCCAAGCAGCCAAGGCTA  479

seq1  ATGCTTGTTCTGTAGCAGCATGCTACAGACATTATGTACTTTAATCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGTTCTGTAGCAGCATGCTACAGACATTATGTACTTTAATCCATT  529

seq1  TTAATCCTCACACCACCACTGGGAGATAAGTATCACAGATCTAACACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCTCACACCACCACTGGGAGATAAGTATCACAGATCTAACACCTT  579

seq1  GTTACATCTCAAATGGCTTAGGAAGCCCAGTAAGAATGGCCTTCGGCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATCTCAAATGGCTTAGGAAGCCCAGTAAGAATGGCCTTCGGCTTA  629

seq1  ATGTGTCTCTTTGGGATGCCGAAATACAAAAGAGGAGCACAGATGTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTCTTTGGGATGCCGAAATACAAAAGAGGAGCACAGATGTTTCT  679

seq1  CTACTGTGTCCCTCAGCCGCTGAGCGTGTTTCTAGCAGGAGCTCACAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTGTCCCTCAGCCGCTGAGCGTGTTTCTAGCAGGAGCTCACAGAA  729

seq1  AGCCTTTCTTTTCTCCCCTCTGTCCACCTCATTCCGACCTCTCCCCAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTCTTTTCTCCCCTCTGTCCACCTCATTCCGACCTCTCCCCAGCT  779

seq1  TTCCCCTCAGCTCTGGCTTTATGACACAAGTCCCCTGTTATCACACGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCAGCTCTGGCTTTATGACACAAGTCCCCTGTTATCACACGAGA  829

seq1  TCACCTCATTCTTGGGAGGCACCCCAAGACCAACAAGATCAAATATTGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCATTCTTGGGAGGCACCCCAAGACCAACAAGATCAAATATTGGC  879

seq1  ATGCCTCGCTGTACGCTCTGAGTTTGCGCACGTTCTCATTCGCTGACTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCGCTGTACGCTCTGAGTTTGCGCACGTTCTCATTCGCTGACTGT  929

seq1  CCTGGTTACTCACTGAATGCTAGACACGGCACTGTGCAGTGAGTGAGAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTACTCACTGAATGCTAGACACGGCACTGTGCAGTGAGTGAGAAG  979

seq1  TATACCAAGTCTGAAGACTCATCTAACCTATGTCTGATAGGTATGTGTAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAAGTCTGAAGACTCATCTAACCTATGTCTGATAGGTATGTGTAT  1029

seq1  TGGGGTGTATGTGTACGTATGATTGACAATTGAAACTGTGGAGGTTTTTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGTATGTGTACGTATGATTGACAATTGAAACTGTGGAGGTTTTTA  1079

seq1  AGAGAATTATTTCAGATAATAAGGAATTC  1129
      |||||||||||||||||||||||||||||
seq2  AGAGAATTATTTCAGATAATAAGGAATTC  1108