BAC Information

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BAC

Clone NameB6Ng01-029O11
Chromosome14 (Build37)
Map Location 48,268,040 - 48,268,682
singlet/doubletsinglet
Overlap genenone
Upstream geneCdkn3, Cnih, Gmfb, Cgrrf1, Samd4, Gch1, Wdhd1, Socs4, LOC670795, C130032J12Rik, Lgals3, Dlg7, LOC666895, Fbxo34, D14Ertd436e, EG625730, LOC100042787
Downstream geneKtn1, 4930447J18Rik, Map1lc3-ps2, Peli2, EG624367, LOC100041831, 6720456H20Rik, 4930572G02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029O11.bB6Ng01-029O11.g
ACCDH859965DH859966
length6431,232
definitionDH859965|Mus musculus domesticus DNA, BAC clone: B6Ng01-029O11, 5' end.DH859966|Mus musculus domesticus DNA, BAC clone: B6Ng01-029O11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaatacctcatcaggctgttgctacaaacgcttcagctttcat
ttctgctttgaagagctctgaaagcttgggcggaaatcattcgaacgcag
acagatgcgcagcattcttgtaactagcctatgatgaggacattctctgt
tgttaatgttgagacttatctgatgctccaatcattaaggattgctcctg
ggtaatggtaatggtgagtctgattctatttctctaccccacactctaga
agcgtgccaatcatttggtaacttttgaggagagtttagagtatgttgta
gatatgttcagggcagtgactggcgttgtctgagataataataataataa
taataataataataataataataaaacactaaaaagcaacaccggagaaa
aagcttccatcctcgcagcaaagagcagagagacgcagagattctggtca
acccctcttagcgctgcagtttctagttatttaaccttgcttaaggaatg
gccagcagccagcaagcattgcagccttacaatatttgcacacaacttat
ttaggtcggctctataaattcctcgttttgcggatttcggaggagaaatc
ccagccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcagccgatagcattatcaggaccacctggaaggcttgttagcaca
cacattcaatggcctaactccagagtttctcattcagtaggtctgggatg
gagcccaacagctggcatatctaacaaattcccaggaatgactggcaccc
actaggatgaccagcaactaacacttcctcttagtctttacccatgtgta
cataacgctctctgggtgaaggctgggctattatcttcttctaagaccca
gttatgacagaagcagtggataacaagtccagatttaggtaacacaaagc
tcaaagcatggtgctgctgctgcccctccccaacccaagggaccatttgc
tgccacattataaaataactcccgatgaagaggcttgcatgacgatggcc
tgagactcagctcacgtacatggacttggaagtgaatcctggcttggcac
tgcaccaccacaccaacttaagtcttcacctgggaccataaccctacaga
cagcttgactgcaacctcatgagacatcttgggatttccgggtgagccgc
atccagatttttatgagctaagagagatttgctgtttgtagtgctagttt
tgatgtaggttgctaattagcaacatagagagctactactagctggccca
taaaactgtactttaaaaaccctgactgtaggagctggagagatggttcc
atggtaaagagcgcaggctgctctcacagaagacgtaagttggattccca
ccatcgacatggcagctcatcaccatctgtaactccagctccaagggatg
caatggcctctaaagggcactgcatgcatgtagttcacagatatgcatga
aggcaaaacacctatatgtataaaataaaaataaataatctttgaaacac
tggctattgaaacagaatctatggtcttctgtcatagttatgcagataca
ctggttttgatatgtgagaattctagatgtgtagagtatcattctagact
tctttattatcatcattctagctccttttatatctgctgccaaaataaga
ataaatggaatataagctcatcatgaaaagcctactttcttcatggcctc
cagacatggatttgtactgtgtggatccacaccgccatgcgctatgtcta
tactggtcatattccagatggacctgcctgacctgaacttaggctacgag
aaaactaccttgtcccctgtcacgaatgagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_48268040_48268682
seq2: B6Ng01-029O11.b_45_687

seq1  GAATTCTCAATACCTCATCAGGCTGTTGCTACAAACGCTTCAGCTTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAATACCTCATCAGGCTGTTGCTACAAACGCTTCAGCTTTCAT  50

seq1  TTCTGCTTTGAAGAGCTCTGAAAGCTTGGGCGGAAATCATTCGAACGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTTGAAGAGCTCTGAAAGCTTGGGCGGAAATCATTCGAACGCAG  100

seq1  ACAGATGCGCAGCATTCTTGTAACTAGCCTATGATGAGGACATTCTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGCGCAGCATTCTTGTAACTAGCCTATGATGAGGACATTCTCTGT  150

seq1  TGTTAATGTTGAGACTTATCTGATGCTCCAATCATTAAGGATTGCTCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATGTTGAGACTTATCTGATGCTCCAATCATTAAGGATTGCTCCTG  200

seq1  GGTAATGGTAATGGTGAGTCTGATTCTATTTCTCTACCCCACACTCTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGGTAATGGTGAGTCTGATTCTATTTCTCTACCCCACACTCTAGA  250

seq1  AGCGTGCCAATCATTTGGTAACTTTTGAGGAGAGTTTAGAGTATGTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGCCAATCATTTGGTAACTTTTGAGGAGAGTTTAGAGTATGTTGTA  300

seq1  GATATGTTCAGGGCAGTGACTGGCGTTGTCTGAGATAATAATAATAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTTCAGGGCAGTGACTGGCGTTGTCTGAGATAATAATAATAATAA  350

seq1  TAATAATAATAATAATAATAATAAAACACTAAAAAGCAACACCGGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAATAATAATAATAATAAAACACTAAAAAGCAACACCGGAGAAA  400

seq1  AAGCTTCCATCCTCGCAGCAAAGAGCAGAGAGACGCAGAGATTCTGGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCCATCCTCGCAGCAAAGAGCAGAGAGACGCAGAGATTCTGGTCA  450

seq1  ACCCCTCTTAGCGCTGCAGTTTCTAGTTATTTAACCTTGCTTAAGGAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCTTAGCGCTGCAGTTTCTAGTTATTTAACCTTGCTTAAGGAATG  500

seq1  GCCAGCAGCCAGCAAGCATTGCAGCCTTACAATATTTGCACACAACTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAGCCAGCAAGCATTGCAGCCTTACAATATTTGCACACAACTTAT  550

seq1  TTAGGTCGGCTCTATAAATTCCTCGTTTTGCGGATTTCGGAGGAGAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCGGCTCTATAAATTCCTCGTTTTGCGGATTTCGGAGGAGAAATC  600

seq1  CCAGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  643
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  643