BAC Information

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BAC

Clone NameB6Ng01-030E12
Chromosome14 (Build37)
Map Location 71,931,378 - 72,124,668
singlet/doubletdoublet
Overlap geneLOC100043136
Upstream geneLgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2, LOC100043132
Downstream geneLOC668477, LOC668482, LOC675957, Fndc3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030E12.bB6Ng01-030E12.g
ACCDH860237DH860238
length928954
definitionDH860237|Mus musculus domesticus DNA, BAC clone: B6Ng01-030E12, 5' end.DH860238|Mus musculus domesticus DNA, BAC clone: B6Ng01-030E12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,123,738 - 72,124,668)(71,931,378 - 71,932,332)
sequence
gaattctcaactcaaggtaagaaggcatgagcaacatgcgatgacaccca
catcctggtctagcttccacatgcatgcacagcatatgtgtataacacac
aaagacatggacacacatagtatatatattgttatgatttttgtggattt
taaggtaccaggggatcccagaagccagcaccacttggaatcctcaggag
gctgcatgagactgtctgttcccacagtttctccactatgcaatatctat
aagtggatggagaaacaaacccagaaagagtcataaaaaatagtcctttg
aggaagttcttggttaaataaaatctaggtgatacaagaagtacctaatt
tctctcttccatttagatatttagcagctacttccaaagaagggcctctg
tttttaatcatggagaagaccagcaagaaggttgcaatgattggaattga
tagggagtgtatcccatgatacaccatgtgtttcttttctatatagggta
ggagccttgtaagaatcaactgaaaagtgtcacctctatacaaaccagcc
ccaccccacttgtgaacttcatggatcctagaaatatgtattcttccttc
acatatagacacagcagtaaaatggaacctgggacatgatgaggcggcct
tgggcagaaaagccactgtgctgacactgtggcatctaggtaaattagac
ccagcactatgaaaagagataaatctatcttttttctctctttgactctt
gctgtgcctgaagctgcttctaaagtgcccacaacatcaagagtgaaata
aatagtgaggtgggattgtaatgttcataatctctgagagaaaatgaggg
aacaataattaggccaaataaacttagagactttcacatccagaccataa
gatctgtactgttgcaatcaacgtttgg
gaattccaatgtgttctatttattgatgttcaatggattcactgctattg
tctcaaagcaaactttaaaaaaattaaagtagaagattggtaatcattgc
acagggtgccccgtgcctcctgtgccttaactgtgtttcccagctcaact
ttctccatctgcactctccctgaatcttctagtctgagaactgccctaga
tcacctacttggttttcactccccttgattgatctcacttagccatactc
tcaggtctagggtcctggctttgagtccttggattccagtgcatgcccag
cctttccgtagaaagcttagttatgcatagcccacaatagccattttaac
ccttcatcagggtagaggtggaaatgcacactaagattttcttgcatttg
tgccttggtttgatttgtccaataatgcttccccttttcatcctgggttt
gtccccgcttacaatagcgctctgttcatatcagtggaattttcttcaca
agccttcgtcttgtcgttccaaatattccatttgaaacaacccccctccc
ctggtgccaccacatctgggcagaactcagtgccaacagcctcctgtcag
atgtttttaggcagaggcccctctgtggcccagggttcttcactgtagcc
tgtagtccttacagccccgagctggcagtgtggggagaggtcactcagtt
cagcgtcggtggggtttgcatcctcctccttgagacactcagagtgtcag
ttctgccctttctgcattgcagcaagggctttcagggctattttaaaagc
ctaccgcacttactatctgcgcacctactatcattcgggtgggttaatca
tcgctgtctgaaagcgtcacttcctgacagaggggttggtataaagacga
gggctggtggtcagtggaaaagcaggacagccagcagcttgggcagactt
actt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_72123738_72124668
seq2: B6Ng01-030E12.b_40_966 (reverse)

seq1  CAAACTGTTGATTGCAACAGTACAGATCTTATGGTCTGTATGTGATAGTC  50
      ||||| |||||||||||||||||||||||||||||||| |||||| ||||
seq2  CAAAC-GTTGATTGCAACAGTACAGATCTTATGGTCTGGATGTGAAAGTC  49

seq1  TCTAAGTTTATTTTGGCCTAATTATTGTTCCCTCATTTTCTTCTCAGAGA  100
      |||||||||| ||||||||||||||||||||||||||||| |||||||||
seq2  TCTAAGTTTA-TTTGGCCTAATTATTGTTCCCTCATTTTC-TCTCAGAGA  97

seq1  TTATTGAACATAACAATCCCACCTCACTATTTATTTCACTCTTTGATGTT  150
      ||| ||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  TTA-TGAACATTACAATCCCACCTCACTATTTATTTCACTC-TTGATGTT  145

seq1  GTGGGCACTTTAGAAGCAGCTTCAGGCACAGCAAGAGTCAAAGAGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCACTTTAGAAGCAGCTTCAGGCACAGCAAGAGTCAAAGAGAGAAA  195

seq1  AAAGATAGATTTATCTC-TTTCATAGTGCTGGGTCTAATTTACCTAGATG  249
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAAGATAGATTTATCTCTTTTCATAGTGCTGGGTCTAATTTACCTAGATG  245

seq1  CCACAGTGTCAGCACAGTGGCTTTTCTGCCCAAGGCCGCCTCATCATGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGTCAGCACAGTGGCTTTTCTGCCCAAGGCCGCCTCATCATGTC  295

seq1  CCAGGTTCCATTTTACTGCTGTGTCTATATGTGAAGGAAGAATACATATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTCCATTTTACTGCTGTGTCTATATGTGAAGGAAGAATACATATT  345

seq1  TCTAGGATCCATGAAGTTCACAAGTGGGGTGGGGCTGGTTTGTATAGAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGATCCATGAAGTTCACAAGTGGGGTGGGGCTGGTTTGTATAGAGG  395

seq1  TGACACTTTTCAGTTGATTCTTACAAGGCTCCTACCCTATATAGAAAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTTTTCAGTTGATTCTTACAAGGCTCCTACCCTATATAGAAAAGA  445

seq1  AACACATGGTGTATCATGGGATACACTCCCTATCAATTCCAATCATTGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATGGTGTATCATGGGATACACTCCCTATCAATTCCAATCATTGCA  495

seq1  ACCTTCTTGCTGGTCTTCTCCATGATTAAAAACAGAGGCCCTTCTTTGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTGCTGGTCTTCTCCATGATTAAAAACAGAGGCCCTTCTTTGGA  545

seq1  AGTAGCTGCTAAATATCTAAATGGAAGAGAGAAATTAGGTACTTCTTGTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTGCTAAATATCTAAATGGAAGAGAGAAATTAGGTACTTCTTGTA  595

seq1  TCACCTAGATTTTATTTAACCAAGAACTTCCTCAAAGGACTATTTTTTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTAGATTTTATTTAACCAAGAACTTCCTCAAAGGACTATTTTTTAT  645

seq1  GACTCTTTCTGGGTTTGTTTCTCCATCCACTTATAGATATTGCATAGTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTTCTGGGTTTGTTTCTCCATCCACTTATAGATATTGCATAGTGG  695

seq1  AGAAACTGTGGGAACAGACAGTCTCATGCAGCCTCCTGAGGATTCCAAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTGTGGGAACAGACAGTCTCATGCAGCCTCCTGAGGATTCCAAGT  745

seq1  GGTGCTGGCTTCTGGGATCCCCTGGTACCTTAAAATCCACAAAAATCATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGCTTCTGGGATCCCCTGGTACCTTAAAATCCACAAAAATCATA  795

seq1  ACAATATATATACTATGTGTGTCCATGTCTTTGTGTGTTATACACATATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATATATACTATGTGTGTCCATGTCTTTGTGTGTTATACACATATG  845

seq1  CTGTGCATGCATGTGGAAGCTAGACCAGGATGTGGGTGTCATCGCATGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATGCATGTGGAAGCTAGACCAGGATGTGGGTGTCATCGCATGTT  895

seq1  GCTCATGCCTTCTTACCTTGAGTTGAGAATTC  931
      ||||||||||||||||||||||||||||||||
seq2  GCTCATGCCTTCTTACCTTGAGTTGAGAATTC  927

seq1: chr14_71931378_71932332
seq2: B6Ng01-030E12.g_71_1024

seq1  GAATTCCAATGTGTTCTATTTATTGATGTTCAATGGATTCACTGCTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGTGTTCTATTTATTGATGTTCAATGGATTCACTGCTATTG  50

seq1  TCTCAAAGCAAACTTTAAAAAAATTAAAGTAGAAGATTGGTAATCATTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAGCAAACTTTAAAAAAATTAAAGTAGAAGATTGGTAATCATTGC  100

seq1  ACAGGGTGCCCCGTGCCTCCTGTGCCTTAACTGTGTTTCCCAGCTCAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTGCCCCGTGCCTCCTGTGCCTTAACTGTGTTTCCCAGCTCAACT  150

seq1  TTCTCCATCTGCACTCTCCCTGAATCTTCTAGTCTGAGAACTGCCCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATCTGCACTCTCCCTGAATCTTCTAGTCTGAGAACTGCCCTAGA  200

seq1  TCACCTACTTGGTTTTCACTCCCCTTGATTGATCTCACTTAGCCATACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTACTTGGTTTTCACTCCCCTTGATTGATCTCACTTAGCCATACTC  250

seq1  TCAGGTCTAGGGTCCTGGCTTTGAGTCCTTGGATTCCAGTGCATGCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCTAGGGTCCTGGCTTTGAGTCCTTGGATTCCAGTGCATGCCCAG  300

seq1  CCTTTCCGTAGAAAGCTTAGTTATGCATAGCCCACAATAGCCATTTTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCGTAGAAAGCTTAGTTATGCATAGCCCACAATAGCCATTTTAAC  350

seq1  CCTTCATCAGGGTAGAGGTGGAAATGCACACTAAGATTTTCTTGCATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATCAGGGTAGAGGTGGAAATGCACACTAAGATTTTCTTGCATTTG  400

seq1  TGCCTTGGTTTGATTTGTCCAATAATGCTTCCCCTTTTCATCCTGGGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGGTTTGATTTGTCCAATAATGCTTCCCCTTTTCATCCTGGGTTT  450

seq1  GTCCCCGCTTACAATAGCGCTCTGTTCATATCAGTGGAATTTTCTTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCGCTTACAATAGCGCTCTGTTCATATCAGTGGAATTTTCTTCACA  500

seq1  AGCCTTCGTCTTGTCGTTCCAAATATTCCATTTGAAACAACCCCCCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCGTCTTGTCGTTCCAAATATTCCATTTGAAACAACCCCCCTCCC  550

seq1  CTGGTGCCACCACATCTGGGCAGAACTCAGTGCCAACAGCCTCCTGTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCCACCACATCTGGGCAGAACTCAGTGCCAACAGCCTCCTGTCAG  600

seq1  ATGTTTTTAGGCAGAGGCCCCTCTGTGGCCCAGGGTTCTTCACTGTAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTAGGCAGAGGCCCCTCTGTGGCCCAGGGTTCTTCACTGTAGCC  650

seq1  TGTAGTCCTTACAGCCCCGAGCTGGCAGTGTGGGGAGAGGTCACTCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCCTTACAGCCCCGAGCTGGCAGTGTGGGGAGAGGTCACTCAGTT  700

seq1  CAGCGTCGGTGGGGTTTGCATCCTCCTCCTTGAGACACTCAGAGTGTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTCGGTGGGGTTTGCATCCTCCTCCTTGAGACACTCAGAGTGTCAG  750

seq1  -TCTGCCCTTTCTGCA-TGCAGCAAGGGCTTTCAGGGCTATTTTTAAAAG  798
       ||||||||||||||| ||||||||||||||||||||||| |||||||||
seq2  TTCTGCCCTTTCTGCATTGCAGCAAGGGCTTTCAGGGCTA-TTTTAAAAG  799

seq1  CCTACCGCACTTACTATCTGCGCCACTTACTATCATTCGGGT-GGTTAAT  847
      |||||||||||||||||||||| ||| ||||||||||||||| |||||||
seq2  CCTACCGCACTTACTATCTGCG-CACCTACTATCATTCGGGTGGGTTAAT  848

seq1  CATCGCTGTCTGAAAGCGTCACTTCCTGACAGAGTGGTTGGTATAGAGAC  897
      |||||||||||||||||||||||||||||||||| |||||||||| ||||
seq2  CATCGCTGTCTGAAAGCGTCACTTCCTGACAGAGGGGTTGGTATAAAGAC  898

seq1  GAGGGCT-GTGGTCCAGTGGAAAAGCAGGACAGCCAGGCAGCCTGGGCAG  946
      ||||||| ||||| |||||||||||||||||||||| ||||| |||||| 
seq2  GAGGGCTGGTGGT-CAGTGGAAAAGCAGGACAGCCA-GCAGCTTGGGCA-  945

seq1  GACTTACTT  955
      |||||||||
seq2  GACTTACTT  954