BAC Information

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BAC

Clone NameB6Ng01-030K08
Chromosome14 (Build37)
Map Location 79,253,349 - 79,365,991
singlet/doubletdoublet
Overlap gene1300010F03Rik, LOC629709
Upstream geneDnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11, Dgkh, LOC673649
Downstream geneLOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030K08.bB6Ng01-030K08.g
ACCDH860486DH860487
length1,1451,099
definitionDH860486|Mus musculus domesticus DNA, BAC clone: B6Ng01-030K08, 5' end.DH860487|Mus musculus domesticus DNA, BAC clone: B6Ng01-030K08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,364,817 - 79,365,991)(79,253,349 - 79,254,472)
sequence
gaattcagatccaacttacacatagctgagtctacctcaggccgaggcca
gtgcctgaagcgcatccgttaccatggccgaggtcgctttggcattatgg
agaaggtctattgccactattttgtaaagctggtggaaggacccccaccc
cacccgaagtacccaagtcagcagttgaccacgccaaggactatattcag
cagcttcgcagccagaccatcatccatactctatgagatctgtgcaggtc
atcctggctccacggtgtatatagcttatgtttattttaaaaagtaaaaa
caagtgatttttatctgtttcattgaaaaaaaaaaaaaaaagaagtgcag
tgagctataaaacaacagatacacaaggaaatgacattaggaaagttaca
gtaactgagttaagaattcaaaaacaaatgcaaaaaccacatataagtac
caaagagggactgtactattaaacaagacagcaggacagaaacgtgacaa
aacatttcaatggagagcttgggccccgtgctttacaagcaaaagagaaa
accaatgagctaacagaagatcatttgaaattacagaagataaaggaaaa
agggaaaacaaagactaaagaaagcttacagacttggtggaagaactcca
agccaatggatgcatgataaaggcagaggaatagaggagaaaagaaagca
gaggggactggagagatggctcagaggttaagagcacggactgagcttct
aaaggtcctgacttcaaatcccagcaaccacatggtgactcacaaccatc
cgtaatgagacctgacgacctcttctggtgcatctgaagataactacagt
gtacttacatataataaacaaatctttaaaaaatatttaaaaaaaaaaga
aagcagaaaacatacttaaaacagcaatgacataacacttcctgattttc
agaagagataaatgagggcccaaagaactaaagagattatagtcacacac
acagtacatatcaattctcaatcaaagctaacaatatggataagcaccat
atgatatgatcaatgtcattgattatacatacaaactgggaagatactgt
agcatagagtaaagaaagacctccagacatgctgaccatggaagc
gaattccaggccagcctggtctacatagtgagttgccaaatgggttcgtg
taagattaattactttttattattttaaacatagaagttttttaaaatta
cctttgagtaatccttttaaataagaaatattctggaaagtaagattaaa
acttcctactttaaatattttctaaatttaatttcatttggaaggtttta
gccttgaattcctttaattaaaaatttcatccaagagacataataattga
ctatagctatctgtggcaattttgtacaatatatggatctagctaatgtg
ttttatttgcatatttgttatataagtgcagttaaatactcagcagtatt
gtttttgtacttctaaaatgagctcattctggttactgaaatcattctag
cagtagtaattattctagagtagacggctactctagtggtagtcgctgag
tagcctatgttttaagtccacctcccccacccccatcctttcctttcttt
tcttttctctcttctttctttctcttctttctttctttctttctttcttt
ctttctttctttctttctttctttctttctttctttaggcaggtctcacg
tagtctaggctagcttcaagctttgtatgttgccaaggctgtccttgaac
ttttgatccttctacctgcagtattttctgctgtgcagggattagaaggt
atacctccacgcttgccctgtctctttatatttcttgacagggttttatg
tagctctggctggcctggaactcactatgcagaccaggctggcctcaaac
tcactgagaaccacttgcctctgactgcagggattgagggtgtggactac
cccatgtagcttcctttattatttgatttttttttttttttgatataaag
tttgcagtggtgccttgggcagctgaacttgtgcatccttctggattttc
acagctgtgactgcatctgactttaatttcttaacttagattaacaaaaa
ctctcttcaaaaaagctgtatggtttctttgcatcactgtacccattgac
tttacattccacgtatgtcctcatttaaagatctgtccaatgactcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_79364817_79365991
seq2: B6Ng01-030K08.b_44_1188 (reverse)

seq1  GCTTCCATGAGTTCAGCATTGGTTCTTGGAGGTCTTTCTTTTTACTTCTT  50
      ||||||||  | |||||||  ||   ||||||||||||  ||||||   |
seq2  GCTTCCAT--GGTCAGCAT--GT--CTGGAGGTCTTTC--TTTACT--CT  40

seq1  ATGGCTTACAAGTTATTCTTTCCAAGTTTTGTATGTATATTCAATGACAT  100
      |||   ||| |||   |||| |||   |||||||||||| ||||||||| 
seq2  ATG--CTAC-AGT--ATCTTCCCA--GTTTGTATGTATAATCAATGACA-  82

seq1  TTGATCATATCCATATTGGTGCTTATCAATATTTGTTAGCTTTTGATTTT  150
      |||||||||| |||| ||||||||||| ||| |||||||| |||||  ||
seq2  TTGATCATAT-CATA-TGGTGCTTATCCATA-TTGTTAGC-TTTGA--TT  126

seq1  GAGAATTTGATATGTACTGTGTGTTGGTGACTATAATCTCTTTAGGTTCT  200
      ||||| ||||||||||||||||||  |||||||||||||||||| |||||
seq2  GAGAA-TTGATATGTACTGTGTGT--GTGACTATAATCTCTTTA-GTTCT  172

seq1  TTGGGCCCTCATTTATCTCTTCTGAAAATTCAGGAAGTGTTATGTCATTG  250
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTGGGCCCTCATTTATCTCTTCTGAAAA-TCAGGAAGTGTTATGTCATTG  221

seq1  CTGTTTTAAGTATGTTTTCTGCTTTCTTTTTTTTTTTAAATATTTTTTAA  300
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTGTTTTAAGTATGTTTTCTGCTTTC-TTTTTTTTTTAAATATTTTTTAA  270

seq1  AGATTTGTTTATTATATGTAAGTACACTGTAGTTATCTTCAGATGCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGTTTATTATATGTAAGTACACTGTAGTTATCTTCAGATGCACCA  320

seq1  GAAGAGGTCGTCAGGTCTCATTACGGATGGTTGTGAGTCACCATGTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGTCGTCAGGTCTCATTACGGATGGTTGTGAGTCACCATGTGGTT  370

seq1  GCTGGGATTTGAAGTCAGGACCTTTAGAAGCTCAGTCCGTGCTCTTAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATTTGAAGTCAGGACCTTTAGAAGCTCAGTCCGTGCTCTTAACC  420

seq1  TCTGAGCCATCTCTCCAGTCCCCTCTGCTTTCTTTTCTCCTCTATTCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCATCTCTCCAGTCCCCTCTGCTTTCTTTTCTCCTCTATTCCTC  470

seq1  TGCCTTTATCATGCATCCATTGGCTTGGAGTTCTTCCACCAAGTCTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTATCATGCATCCATTGGCTTGGAGTTCTTCCACCAAGTCTGTAA  520

seq1  GCTTTCTTTAGTCTTTGTTTTCCCTTTTTCCTTTATCTTCTGTAATTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTTTAGTCTTTGTTTTCCCTTTTTCCTTTATCTTCTGTAATTTCA  570

seq1  AATGATCTTCTGTTAGCTCATTGGTTTTCTCTTTTGCTTGTAAAGCACGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCTTCTGTTAGCTCATTGGTTTTCTCTTTTGCTTGTAAAGCACGG  620

seq1  GGCCCAAGCTCTCCATTGAAATGTTTTGTCACGTTTCTGTCCTGCTGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAAGCTCTCCATTGAAATGTTTTGTCACGTTTCTGTCCTGCTGTCT  670

seq1  TGTTTAATAGTACAGTCCCTCTTTGGTACTTATATGTGGTTTTTGCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATAGTACAGTCCCTCTTTGGTACTTATATGTGGTTTTTGCATTT  720

seq1  GTTTTTGAATTCTTAACTCAGTTACTGTAACTTTCCTAATGTCATTTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGAATTCTTAACTCAGTTACTGTAACTTTCCTAATGTCATTTCCT  770

seq1  TGTGTATCTGTTGTTTTATAGCTCACTGCACTTCTTTTTTTTTTTTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATCTGTTGTTTTATAGCTCACTGCACTTCTTTTTTTTTTTTTTTT  820

seq1  CAATGAAACAGATAAAAATCACTTGTTTTTACTTTTTAAAATAAACATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAACAGATAAAAATCACTTGTTTTTACTTTTTAAAATAAACATAA  870

seq1  GCTATATACACCGTGGAGCCAGGATGACCTGCACAGATCTCATAGAGTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATACACCGTGGAGCCAGGATGACCTGCACAGATCTCATAGAGTAT  920

seq1  GGATGATGGTCTGGCTGCGAAGCTGCTGAATATAGTCCTTGGCGTGGTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATGGTCTGGCTGCGAAGCTGCTGAATATAGTCCTTGGCGTGGTCA  970

seq1  ACTGCTGACTTGGGTACTTCGGGTGGGGTGGGGGTCCTTCCACCAGCTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGACTTGGGTACTTCGGGTGGGGTGGGGGTCCTTCCACCAGCTTT  1020

seq1  ACAAAATAGTGGCAATAGACCTTCTCCATAATGCCAAAGCGACCTCGGCC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATAGTGGCAATAGACCTTCTCCATAATGCCAAAGCGACCTCGGCC  1070

seq1  ATGGTAACGGATGCGCTTCAGGCACTGGCCTCGGCCTGAGGTAGACTCAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAACGGATGCGCTTCAGGCACTGGCCTCGGCCTGAGGTAGACTCAG  1120

seq1  CTATGTGTAAGTTGGATCTGAATTC  1175
      |||||||||||||||||||||||||
seq2  CTATGTGTAAGTTGGATCTGAATTC  1145

seq1: chr14_79253349_79254472
seq2: B6Ng01-030K08.g_68_1166

seq1  GAATTCCAGGCCAGCCTGGTCTACATAGTGAGTTGCCAAATGGGTTCGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAGCCTGGTCTACATAGTGAGTTGCCAAATGGGTTCGTG  50

seq1  TAAGATTAATTACTTTTTATTATTTTAAACATAGAAGTTTTTTAAAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTAATTACTTTTTATTATTTTAAACATAGAAGTTTTTTAAAATTA  100

seq1  CCTTTGAGTAATCCTTTTAAATAAGAAATATTCTGGAAAGTAAGATTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAGTAATCCTTTTAAATAAGAAATATTCTGGAAAGTAAGATTAAA  150

seq1  ACTTCCTACTTTAAATATTTTCTAAATTTAATTTCATTTGGAAGGTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTACTTTAAATATTTTCTAAATTTAATTTCATTTGGAAGGTTTTA  200

seq1  GCCTTGAATTCCTTTAATTAAAAATTTCATCCAAGAGACATAATAATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAATTCCTTTAATTAAAAATTTCATCCAAGAGACATAATAATTGA  250

seq1  CTATAGCTATCTGTGGCAATTTTGTACAATATATGGATCTAGCTAATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGCTATCTGTGGCAATTTTGTACAATATATGGATCTAGCTAATGTG  300

seq1  TTTTATTTGCATATTTGTTATATAAGTGCAGTTAAATACTCAGCAGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGCATATTTGTTATATAAGTGCAGTTAAATACTCAGCAGTATT  350

seq1  GTTTTTGTACTTCTAAAATGAGCTCATTCTGGTTACTGAAATCATTCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTACTTCTAAAATGAGCTCATTCTGGTTACTGAAATCATTCTAG  400

seq1  CAGTAGTAATTATTCTAGAGTAGACGGCTACTCTAGTGGTAGTCGCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTAATTATTCTAGAGTAGACGGCTACTCTAGTGGTAGTCGCTGAG  450

seq1  TAGCCTATGTTTTAAGTCCACCTCCCCCACCCCCATCCTTTCCTTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTATGTTTTAAGTCCACCTCCCCCACCCCCATCCTTTCCTTTCTTT  500

seq1  TCTTTTCTCTCTTCTTTCTTTCTCTTCTTTCTTTCTTTCTTTCTTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTCTCTTCTTTCTTTCTCTTCTTTCTTTCTTTCTTTCTTTCTTT  550

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTAGGCAGGTCTCACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTAGGCAGGTCTCACG  600

seq1  TAGTCTAGGCTAGCTTCAAGCTTTGTATGTTGCCAAGGCTGTCCTTGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTAGGCTAGCTTCAAGCTTTGTATGTTGCCAAGGCTGTCCTTGAAC  650

seq1  TTTTGATCCTTCTACCTGCAGTA-TTTCTGCTGTGCAGGGATTAGAAGGT  699
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTTTGATCCTTCTACCTGCAGTATTTTCTGCTGTGCAGGGATTAGAAGGT  700

seq1  ATACCTCCACGCTTGCCCTGTCTCTTTATATTTCTTGACAGGGTTTTATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTCCACGCTTGCCCTGTCTCTTTATATTTCTTGACAGGGTTTTATG  750

seq1  TAGCTCTGGCTGGCCTGGAACTCACTATGCAGACCAGGCTGGCCTCAAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTGGCTGGCCTGGAACTCACTATGCAGACCAGGCTGGCCTCAAAC  800

seq1  TCACTGAGAACCACTTGCCTCTGACTGCAGGGATTGAGGGTGTGGACTAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAGAACCACTTGCCTCTGACTGCAGGGATTGAGGGTGTGGACTAC  850

seq1  CCCATGTAGCTTTCTTTAATTATTTGATTTTTTTTTTTTTTTTGATATAA  899
      |||||||||||| |||| ||||||||| ||||||||||||||||||||||
seq2  CCCATGTAGCTTCCTTT-ATTATTTGA-TTTTTTTTTTTTTTTGATATAA  898

seq1  AGTCTTGCAGTGGTGCCTTGGGCAGCCTGGAACTTGTGGCATCCTTCTGG  949
      ||| ||||||||||||||||||||||   |||||||| ||||||||||||
seq2  AGT-TTGCAGTGGTGCCTTGGGCAGC--TGAACTTGT-GCATCCTTCTGG  944

seq1  AATTATTCACAGCTGTGACTGCATCTGACTTTAAATTTCTTAACTTAGAA  999
      |  | ||||||||||||||||||||||||||| ||||||||||||||| |
seq2  A--TTTTCACAGCTGTGACTGCATCTGACTTT-AATTTCTTAACTTAG-A  990

seq1  TTAACAAAAAACTTCTCTTCAAGAAAAGCCTGTATTGGTTTCTTCTGCAT  1049
      ||||||||||   ||||||||| ||||| ||||| ||||||||| |||||
seq2  TTAACAAAAA--CTCTCTTCAA-AAAAG-CTGTA-TGGTTTCTT-TGCAT  1034

seq1  AAATTGTTACCCATTGACTTTTACATTCCACCGTAATGACCTCATTTAAA  1099
       | |   ||||||||||| ||||||||||| ||| ||| |||||||||| 
seq2  CACT--GTACCCATTGAC-TTTACATTCCA-CGT-ATGTCCTCATTTAA-  1078

seq1  TAGATCTGTTTCAAATGACTTCACT  1124
       |||||||  || |||||| |||||
seq2  -AGATCTG--TCCAATGAC-TCACT  1099