BAC Information

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BAC

Clone NameB6Ng01-030N06
Chromosome14 (Build37)16 (Build37)
Map Location 92,367,132 - 92,367,64987,101,583 - 87,102,696
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG639558
Downstream geneEG665377, LOC638252
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030N06.bB6Ng01-030N06.g
ACCDH860616DH860617
length9531,096
definitionDH860616|Mus musculus domesticus DNA, BAC clone: B6Ng01-030N06, 5' end.DH860617|Mus musculus domesticus DNA, BAC clone: B6Ng01-030N06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(92,367,132 - 92,367,649)(87,101,583 - 87,102,696)
sequence
gaattcaatgtcctttgcttcctgtgggtgtcatgtgactcttgctaaca
tccccttcttaccacaatgctttgtattgccttgacctctaagtcaaagt
aaatattttctctttctacttacttcttgtcagatcttttgtcacagcaa
tgagataactggttaatagagtagaaatccttaaatccatcaaagcatta
aaaattaacttattattgaagatttttaggggatcagtatcctgaattta
aaatcagctgaaacaagggaaaaatagttgaataacttaagtggggctta
atgggccatgcctgtaggagtgtggaagacaatgctgctgagagcaatgt
agattatgacagctgagctcaagagatttcagatgaaaagaatattagta
attggcctaggccaattcttatgatacttagggaaagaatgtggctgctt
tctgcctttgtccaaaatatctgcctaaagctaaatcgacaccttttggt
gttgacagaggagatttcaagacaacctagtattgactgtgtcacatgat
tattaatggcaactcttatgcagatctataatgaaaaagatgaaacaata
agctgagtgaggaaaaattcaaagtgtgctgtctgaggagaaaaggggca
tgaggatgtatgatggagctaagtccagtgctcaaggagataaaaagcac
cattgcatacactagcaagattttatcgaaaggacccagatgtagctgtc
tcttgtgagactatgccggggcctagcaaacacagaagtggatgctcaca
gtcagctattggatggatcacagggctcccaatggaggagctagagaaag
tacccaaggagctaagggatctgcaaccctataggtggaacacattatga
acttaccagtacccggagctcttgactctagctgcatatgtatgaaaaga
tgg
gaattcattgctgtctcatttttttttaatgaagacaaaatatgaccagt
caccttacattcctgcttccatttctcttctgcctcagggagatgtgtcc
cgaaaaaacacaagctgaaaccaacacttccttcccggtattggttgttt
gtcatgcttttaatttgttccagtgagaaaaataagtaattcttccgtgc
tgtaaaatactttctccgtcatgctcagtagtttctactctattcagcag
acaagctgtggctactatagcccagggacttaaagatgctgctggatgtt
cctattaatatattttagggaagagctgaggaacaacagacatggggagc
agcgagccactttggtttctgtctcaatgatgcataggatgagttctaag
ctaagaggtactggagaaatagagatgaaattcctgcctcgaaagagcgt
tgagatgcataattacaaagaattatagcaatcatgtgtcagggtactaa
ccagaaaaagaggtttcttttttttctgaaatattaatttgtttaaagaa
gagctgtctttgttattatctacatctcatgtgtataaatcctaaaacaa
aaaaatcatagctgttgcttttctaaagccataagaatccattcagtcat
tcctagtgctccagttatacagattttactgagagtggatgattgcagtt
acagcctggagagagaataataatcaggagttaggttaaccttcaggaat
aaaagtctgggtagtgttaggaaaatctgagtcacatctagaagcaagcc
atctgaccccaacaggataaaaggaatcttagtgggtgacagtgttgaca
ttttttatgagagccttggaccaaccatgagaagacagctggagtcatca
gcccacacttgatcagcatgttgagagtcatggcagaaagagtaaactca
catagtctatctgagcagtgacagagtgggctgtagagacacccacaagc
tccctcccagaccttctaagatcctctttactccttcagatttacttggc
cagttttccatggctggctctgatgtctctcctttccagttacatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_92367132_92367649
seq2: B6Ng01-030N06.b_741_996 (reverse)

seq1  CCATCTTTTGATACATATGCAGCTAGAGTCAAGAGTTCCGGGGTACTGGT  50
      ||||||||| ||||||||||||||||||||||||| ||| ||||||||||
seq2  CCATCTTTTCATACATATGCAGCTAGAGTCAAGAGCTCC-GGGTACTGGT  49

seq1  TAGTTCATAATGTTGTTCCACCCATAGGGTTGCAGATCCCTTTAGCTCCT  100
       ||||||||||| ||||||||| ||||||||||||||||| |||||||||
seq2  AAGTTCATAATG-TGTTCCACCTATAGGGTTGCAGATCCC-TTAGCTCCT  97

seq1  TGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGCAGGATAAGCAT  150
      ||||||||||||||||||||||||||||||||||||||            
seq2  TGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTG-----------A  136

seq1  TCTATGTTATATTAGAATATGTTTTGGGGTACATAAGAAATTTTCCCTTG  200
      || ||   |||   || | ||              || |   | | ||| 
seq2  TCCATCCAATAGCTGACTGTG--------------AGCA---TCCACTTC  169

seq1  GGTGGAGTATTATCACCTTCAATATCCCAGTGATGTTCATCTCTCATGCT  250
       |||     ||      | | |   ||| |              |||   
seq2  TGTG-----TT------TGCTAGGCCCCGG--------------CAT---  191

seq1  GAGAATAAAAGCTGACACAAGTTACAGCATATTCTGAAACCCAATGAGTA  300
               || |  ||||||  |||||                      
seq2  ---------AG-TCTCACAAGAGACAGC----------------------  209

seq1  TACATGCTGGGAATTAAAGAAATAAAA----AATAATCTTTGCAAGGGTA  346
      ||||| |||||   |   |  ||||||      || | | ||||| ||| 
seq2  TACAT-CTGGGTCCTTTCG--ATAAAATCTTGCTAGTGTATGCAATGGTG  256

seq1  CAAGGTCAGAGAGAAATAGAGTGAGAAGTGGTACAATTAATCTAATCCAG  396
                                                        
seq2  --------------------------------------------------  256

seq1  GGAAAGGAAACAAACCAGGGAGAGTTCTACTTAGGGGGTGGGTGGGAGAT  446
                                                        
seq2  --------------------------------------------------  256

seq1  AAATACAGTAAGAGAAGGTAGAAGTTAAAACAATTTGAAAGCTGTCTGAT  496
                                                        
seq2  --------------------------------------------------  256

seq1  AATGCTAGTGTATGCAATGGTG  518
                            
seq2  ----------------------  256

seq1: chr16_87101583_87102696
seq2: B6Ng01-030N06.g_68_1163

seq1  GAATTCATTGCTGTCTCATTTTTTTTTAATGAAGACAAAATATGACCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCTGTCTCATTTTTTTTTAATGAAGACAAAATATGACCAGT  50

seq1  CACCTTACATTCCTGCTTCCATTTCTCTTCTGCCTCAGGGAGATGTGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTACATTCCTGCTTCCATTTCTCTTCTGCCTCAGGGAGATGTGTCC  100

seq1  CGAAAAAACACAAGCTGAAACCAACACTTCCTTCCCGGTATTGGTTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAAACACAAGCTGAAACCAACACTTCCTTCCCGGTATTGGTTGTTT  150

seq1  GTCATGCTTTTAATTTGTTCCAGTGAGAAAAATAAGTAATTCTTCCGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGCTTTTAATTTGTTCCAGTGAGAAAAATAAGTAATTCTTCCGTGC  200

seq1  TGTAAAATACTTTCTCCGTCATGCTCAGTAGTTTCTACTCTATTCAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAATACTTTCTCCGTCATGCTCAGTAGTTTCTACTCTATTCAGCAG  250

seq1  ACAAGCTGTGGCTACTATAGCCCAGGGACTTAAAGATGCTGCTGGATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTGTGGCTACTATAGCCCAGGGACTTAAAGATGCTGCTGGATGTT  300

seq1  CCTATTAATATATTTTAGGGAAGAGCTGAGGAACAACAGACATGGGGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTAATATATTTTAGGGAAGAGCTGAGGAACAACAGACATGGGGAGC  350

seq1  AGCGAGCCACTTTGGTTTCTGTCTCAATGATGCATAGGATGAGTTCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGCCACTTTGGTTTCTGTCTCAATGATGCATAGGATGAGTTCTAAG  400

seq1  CTAAGAGGTACTGGAGAAATAGAGATGAAATTCCTGCCTCGAAAGAGCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGGTACTGGAGAAATAGAGATGAAATTCCTGCCTCGAAAGAGCGT  450

seq1  TGAGATGCATAATTACAAAGAATTATAGCAATCATGTGTCAGGGTACTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGCATAATTACAAAGAATTATAGCAATCATGTGTCAGGGTACTAA  500

seq1  CCAGAAAAAGAGGTTTCTTTTTTTTCTGAAATATTAATTTGTTTAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAAAGAGGTTTCTTTTTTTTCTGAAATATTAATTTGTTTAAAGAA  550

seq1  GAGCTGTCTTTGTTATTATCTACATCTCATGTGTATAAATCCTAAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTCTTTGTTATTATCTACATCTCATGTGTATAAATCCTAAAACAA  600

seq1  AAAAATCATAGCTGTTGCTTTTCTAAAGCCATAAGAATCCATTCAGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCATAGCTGTTGCTTTTCTAAAGCCATAAGAATCCATTCAGTCAT  650

seq1  TCCTAGTGCTCCAGTTATACAGATTTTACTGAGAGTGGATGATTGCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTGCTCCAGTTATACAGATTTTACTGAGAGTGGATGATTGCAGTT  700

seq1  ACAGCCTGGAGAGAGAATAATAATCAGGAGTTAGGTTAACCTTCAGGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTGGAGAGAGAATAATAATCAGGAGTTAGGTTAACCTTCAGGAAT  750

seq1  AAAAGTCTGGGTAGTGTTAGGAAAATCTGAGTCACATCTAGAAGCAAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTGGGTAGTGTTAGGAAAATCTGAGTCACATCTAGAAGCAAGCC  800

seq1  ATCTGACCCCAACAGGATAAAAGGAATCTTAGGTGGGTGACAGTGTTGAC  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATCTGACCCCAACAGGATAAAAGGAATCTTA-GTGGGTGACAGTGTTGAC  849

seq1  ATTTTTTAATGAGAGCCTTGGGACCAACCATGAAGAAAGAACAGCTGGAG  900
      ||||||| ||||||||||| |||||||||||| ||||   ||||||||||
seq2  ATTTTTT-ATGAGAGCCTT-GGACCAACCATG-AGAA--GACAGCTGGAG  894

seq1  TCATCAGCCCACACTTGATCAGCATGTTGAAGAAGTCATGGCAGGACAGA  950
      ||||||||||||||||||||||||||||||   |||||||||| || |||
seq2  TCATCAGCCCACACTTGATCAGCATGTTGA--GAGTCATGGCA-GAAAGA  941

seq1  GTAAACCTCACATAGTCTATCTGAGCAGTGACAGAAGTGGGCTGTAGAGA  1000
      ||||| |||||||||||||||||||||||||||| |||||||||||||| 
seq2  GTAAA-CTCACATAGTCTATCTGAGCAGTGACAG-AGTGGGCTGTAGAG-  988

seq1  ACACCCACAAGCTCCCTCACAGACCTTCTTAGATCCTCTTTACTCTTTCA  1050
      |||||||||||||||||| |||||||||| ||||||||||||||| ||||
seq2  ACACCCACAAGCTCCCTCCCAGACCTTCTAAGATCCTCTTTACTCCTTCA  1038

seq1  GGAATTTACTTGCCCAGTTTTTTCCAATGGCTGGGTTCTGATG-CTCTTC  1099
      |  ||||||||| ||||||||   | |||||| || ||||||| |||| |
seq2  G--ATTTACTTGGCCAGTTTT---CCATGGCT-GGCTCTGATGTCTCTCC  1082

seq1  TTTCACAGTTACATG  1114
      |||| ||||||||||
seq2  TTTC-CAGTTACATG  1096