BAC Information

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BAC

Clone NameB6Ng01-032F02
Chromosome14 (Build37)
Map Location 16,396,899 - 16,506,513
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667152, LOC100042147, Slc4a7, Nek10, Lrrc3b
Downstream geneLOC667205, 1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1, Top2b, Rarb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032F02.bB6Ng01-032F02.g
ACCDH861691DH861692
length1,0931,064
definitionDH861691|Mus musculus domesticus DNA, BAC clone: B6Ng01-032F02, 5' end.DH861692|Mus musculus domesticus DNA, BAC clone: B6Ng01-032F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,396,899 - 16,398,004)(16,505,455 - 16,506,513)
sequence
gaattccaggccataaatatgcatctgcaaaatgattaacttgaaggcca
gcttcagagctctatctttcctcacccaccatctgcacagctcctgttta
aaagtagcttaggaagtggctgtgaggccagcacagccatccaaagtcag
agacagttgcccctttgtggcattgtgacctgaggagcaaaggaagaaga
taaaaaggaatgtaaattcctttggcaatgagtacagctcacttcttttc
ccatgtttccaggggccgtgaacttcttcaatcctctcaaatctaagaca
tttacaaacctgtggaaaatatagataagtgatagatagtagataggcag
acagacagagagacagatagataattgagagatacatagatgatagatag
atacatagatacatagatgataggtacatagaagtcagatacatagatgc
atagatgatagatataagtcctcaaactcagcttctgcttgtatttaaaa
atcaactgtcacataggatagcttctggagacttcagtgttcttcattca
cagctgtgcgtgaacatacagaaaccatgatttcacacacaggaacttaa
aatccaactccttgttcatagtaaccagctattttgcccacatcccattt
cttctaaccaagttcacatcagagcatagcactcagtgctcagcacagtg
cagagttgacccaatattatttcccattgtgcagaacattcagcagactt
tctctctgtgccgctgtccctcaacaacagacttactctgcagtgacaat
cctgtgtctctcaaatatcagcacccagaacattatatgcagatcatatc
ctaataatcctaatatatcttcttgtttcagttttgtttttattgcacat
atttttgagacactgtatcataattcaaggcatgtaaacaatatgagatg
atttattcagtataattacatttccattgtattgagaatctttgtactca
gtctctagctttcataaaatattataagaaatgtaactgtgtgctagata
tgggaaggaagttctgtttctgcaattgattgctcagttaaaa
gaattcttaacttccttgggtttggtgtgtgtgtgtgtgtgtgtgttaat
aatttaagcagaaaaggcatttcttgtgttttctctaaagaacacacata
attaaatgaatgactatgttccatgggaaggtataagaccttaggtgtta
tacctctgggctgtagggccatcagcatccctactgaggctgtctgaaat
tctttgcctgtgctaatgcaggagaggaaaactgggccaacatatccaca
tatctcaattctttcctaccctacttccatgctcaccaccacacccatta
ttctcattattcattaatgatcatttagtgattagttttcatagaaacag
tgaaaataccattgagtgtaggaaaatgggaaatttaggcctcattctcc
aattaactgctaagagtatgatgctatcatgaaagagaaaagactacctt
ggcaggtttctgaactatgactttgattcctgttcatctagttttaaaga
ttatccttttagttctgcaattctttttgctggtagccttttagatagtt
taatcacaattcttagtggtcctttgtaacataaattcgaggcaggttgg
aattattaaaaagatttatttgatcacaattttttcatgtttaaaatggg
caaaagttcctgatggttcattattttgaggatggcaggcctcctatttt
aaaaacaaaacaaaacaaaacaaaaaaaaaaaaaaaaacaggacaggaca
gggcaggataggacaggcccttcatcaacttcaagaatgaacttgggaag
aagagggtcatctcccaaagtcagctacatgtggcttttttagaaaattg
aaactgacccatttacttgtgctcaaatttgcctttggatttacagggct
aacattttttcctatattgtctgttgttttaacaaaagggattgctgacc
tggaaaaagttgtaatggaagaattcttagatgccaccattcttaatctg
ttaatggctaattttcacagtaagtgggactccagttggtttcaagctgg
atggcttttctgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_16396899_16398004
seq2: B6Ng01-032F02.b_46_1138

seq1  GAATTCCAGGCCATAAATATGCATCTGCAAAATGATTAACTTGAAGGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCATAAATATGCATCTGCAAAATGATTAACTTGAAGGCCA  50

seq1  GCTTCAGAGCTCTATCTTTCCTCACCCACCATCTGCACAGCTCCTGTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGAGCTCTATCTTTCCTCACCCACCATCTGCACAGCTCCTGTTTA  100

seq1  AAAGTAGCTTAGGAAGTGGCTGTGAGGCCAGCACAGCCATCCAAAGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGCTTAGGAAGTGGCTGTGAGGCCAGCACAGCCATCCAAAGTCAG  150

seq1  AGACAGTTGCCCCTTTGTGGCATTGTGACCTGAGGAGCAAAGGAAGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTTGCCCCTTTGTGGCATTGTGACCTGAGGAGCAAAGGAAGAAGA  200

seq1  TAAAAAGGAATGTAAATTCCTTTGGCAATGAGTACAGCTCACTTCTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGGAATGTAAATTCCTTTGGCAATGAGTACAGCTCACTTCTTTTC  250

seq1  CCATGTTTCCAGGGGCCGTGAACTTCTTCAATCCTCTCAAATCTAAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTTCCAGGGGCCGTGAACTTCTTCAATCCTCTCAAATCTAAGACA  300

seq1  TTTACAAACCTGTGGAAAATATAGATAAGTGATAGATAGTAGATAGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAACCTGTGGAAAATATAGATAAGTGATAGATAGTAGATAGGCAG  350

seq1  ACAGACAGAGAGACAGATAGATAATTGAGAGATACATAGATGATAGATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGAGAGACAGATAGATAATTGAGAGATACATAGATGATAGATAG  400

seq1  ATACATAGATACATAGATGATAGGTACATAGAAGTCAGATACATAGATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGATACATAGATGATAGGTACATAGAAGTCAGATACATAGATGC  450

seq1  ATAGATGATAGATATAAGTCCTCAAACTCAGCTTCTGCTTGTATTTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGATAGATATAAGTCCTCAAACTCAGCTTCTGCTTGTATTTAAAA  500

seq1  ATCAACTGTCACATAGGATAGCTTCTGGAGACTTCAGTGTTCTTCATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTGTCACATAGGATAGCTTCTGGAGACTTCAGTGTTCTTCATTCA  550

seq1  CAGCTGTGCGTGAACATACAGAAACCATGATTTCACACACAGGAACTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGCGTGAACATACAGAAACCATGATTTCACACACAGGAACTTAA  600

seq1  AATCCAACTCCTTGTTCATAGTAACCAGCTATTTTGCCCACATCCCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAACTCCTTGTTCATAGTAACCAGCTATTTTGCCCACATCCCATTT  650

seq1  CTTCTAACCAAGTTCACATCAGAGCATAGCACTCAGTGCTCAGCACAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAACCAAGTTCACATCAGAGCATAGCACTCAGTGCTCAGCACAGTG  700

seq1  CAGAGTTGACCCAATATTATTTCCCATTGTGCAGAACATTCAGCAGACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTGACCCAATATTATTTCCCATTGTGCAGAACATTCAGCAGACTT  750

seq1  TCTCTCTGTGCCGCTGTCCCTCAACAACAGACTTACTCTGCAGTGACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTGCCGCTGTCCCTCAACAACAGACTTACTCTGCAGTGACAAT  800

seq1  CCTGTGTCTCTCAAATATCAGCACCCAGAACATTATATGCAGATCATATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCTCTCAAATATCAGCACCCAGAACATTATATGCAGATCATATC  850

seq1  CTAATAATCCTAATATATCTTCTTGTTTCAGTTTTGTTTTTATTGCACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAATCCTAATATATCTTCTTGTTTCAGTTTTGTTTTTATTGCACAT  900

seq1  ATTTTTGAGACACTGTATCATAATTCAAGGCATGTAAACAATATGAGATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAGACACTGTATCATAATTCAAGGCATGTAAACAATATGAGATG  950

seq1  ATTTATTCAGTATAATTAACATTTCCATTGTATTGAGAATCTTTGTACTC  1000
      ||||||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  ATTTATTCAGTATAATT-ACATTTCCATTGTATTGAGAATCTTTGTACT-  998

seq1  CAGTCTCCTAGCTTTTCATAAAATA-TATAAGAAATTGTAAACTGTAGTG  1049
      |||||| ||||| |||||||||||| ||||||||| ||| |||||| |||
seq2  CAGTCT-CTAGC-TTTCATAAAATATTATAAGAAA-TGT-AACTGT-GTG  1043

seq1  CTAGGATATGAGAAGAGAGGGTTCTGTTTCTGCAAATTTGTAATTGCTCA  1099
      ||| |||||| ||||  |  |||||||||||||||  |||  ||||||||
seq2  CTA-GATATGGGAAGGAA--GTTCTGTTTCTGCAA--TTG--ATTGCTCA  1086

seq1  GTAAAAA  1106
      || ||||
seq2  GTTAAAA  1093

seq1: chr14_16505455_16506513
seq2: B6Ng01-032F02.g_66_1118 (reverse)

seq1  CATCCAGCTTTGAAACCAACTGGTAGT-CCACTATGCTGTGAAAATTAGT  49
      |||||||| |||||||||||||| ||| ||||| | ||||||||||||| 
seq2  CATCCAGC-TTGAAACCAACTGG-AGTCCCACT-TACTGTGAAAATTAGC  47

seq1  CAATAACAGAATAAGAATGTGGTGGCATACTAAGAATTGCTTCATTTACA  99
      || ||||||| ||||||  ||||||||| ||||||||| ||||  |||||
seq2  CATTAACAGATTAAGAA--TGGTGGCAT-CTAAGAATT-CTTCCATTACA  93

seq1  ACCTTTTTCCAGGTCAGCAATCCCTTTTGTTAAAACAACAGACAATTAAG  149
      | ||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  A-CTTTTTCCAGGTCAGCAATCCCTTTTGTTAAAACAACAGACAATATAG  142

seq1  GAAAATATGTTAGCCCTGTAAATCCAAAGGACAAATTGTGAGCACAAGT-  198
      ||||| |||||||||||||||||||||||| |||||| ||||||||||| 
seq2  GAAAAAATGTTAGCCCTGTAAATCCAAAGG-CAAATT-TGAGCACAAGTA  190

seq1  AATGGGTCAGTTTCAATTTATCTCAAAAAGCCACATGTAGCTGACTTTGG  248
      ||||||||||||||||||| ||| ||||||||||||||||||||||||||
seq2  AATGGGTCAGTTTCAATTT-TCTAAAAAAGCCACATGTAGCTGACTTTGG  239

seq1  GAGATTGACCCTCTTCTTCCCAAGTTCATTCTTGAAGTTGATGAAGGGCC  298
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGA-TGACCCTCTTCTTCCCAAGTTCATTCTTGAAGTTGATGAAGGGCC  288

seq1  TGTCCTATCCTGCCCTGTCCTGTCCTG--TTTTTTTTTTTTTTTGTTTTG  346
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  TGTCCTATCCTGCCCTGTCCTGTCCTGTTTTTTTTTTTTTTTTTGTTTTG  338

seq1  TTTTGTTTTGTTTTT-AAATAGGAGGCCTGCCATCCTCAAAATAATGAAC  395
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTTAAAATAGGAGGCCTGCCATCCTCAAAATAATGAAC  388

seq1  CATCAGGAACTTTTGCCCATTTTAAACATGAAAAAATTGTGATC-AATAA  444
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CATCAGGAACTTTTGCCCATTTTAAACATGAAAAAATTGTGATCAAATAA  438

seq1  ATCTTTTTAATAATTCCAACCTGCCTCGAATTTATGTTACAAAGGACCAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTAATAATTCCAACCTGCCTCGAATTTATGTTACAAAGGACCAC  488

seq1  TAAGAATTGTGATTAAACTATCTAAAAGGCTACCAGCAAAAAGAATTGCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTGTGATTAAACTATCTAAAAGGCTACCAGCAAAAAGAATTGCA  538

seq1  GAACTAAAAGGATAATCTTTAAAACTAGATGAACAGGAATCAAAGTCATA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAAAGGATAATCTTTAAAACTAGATGAACAGGAATCAAAGTCATA  588

seq1  GTTCAGAAACCTGCCAAGGTAGTCTTTTCTCTTTCATGATAGCATCATAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAAACCTGCCAAGGTAGTCTTTTCTCTTTCATGATAGCATCATAC  638

seq1  TCTTAGCAGTTAATTGGAGAATGAGGCCTAAATTTCCCATTTTCCTACAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCAGTTAATTGGAGAATGAGGCCTAAATTTCCCATTTTCCTACAC  688

seq1  TCAATGGTATTTTCACTGTTTCTATGAAAACTAATCACTAAATGATCATT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGTATTTTCACTGTTTCTATGAAAACTAATCACTAAATGATCATT  738

seq1  AATGAATAATGAGAATAATGGGTGTGGTGGTGAGCATGGAAGTAGGGTAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATAATGAGAATAATGGGTGTGGTGGTGAGCATGGAAGTAGGGTAG  788

seq1  GAAAGAATTGAGATATGTGGATATGTTGGCCCAGTTTTCCTCTCCTGCAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATTGAGATATGTGGATATGTTGGCCCAGTTTTCCTCTCCTGCAT  838

seq1  TAGCACAGGCAAAGAATTTCAGACAGCCTCAGTAGGGATGCTGATGGCCC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAGGCAAAGAATTTCAGACAGCCTCAGTAGGGATGCTGATGGCCC  888

seq1  TACAGCCCAGAGGTATAACACCTAAGGTCTTATACCTTCCCATGGAACAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCCCAGAGGTATAACACCTAAGGTCTTATACCTTCCCATGGAACAT  938

seq1  AGTCATTCATTTAATTATGTGTGTTCTTTAGAGAAAACACAAGAAATGCC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTCATTTAATTATGTGTGTTCTTTAGAGAAAACACAAGAAATGCC  988

seq1  TTTTCTGCTTAAATTATTAACACACACACACACACACACACCAAACCCAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCTTAAATTATTAACACACACACACACACACACACCAAACCCAA  1038

seq1  GGAAGTTAAGAATTC  1059
      |||||||||||||||
seq2  GGAAGTTAAGAATTC  1053