BAC Information

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BAC

Clone NameB6Ng01-034F06
Chromosome14 (Build37)
Map Location 112,586,488 - 112,587,432
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk5, LOC100043501
Downstream geneEG223186, LOC100043509
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034F06.bB6Ng01-034F06.g
ACCDH863116DH863117
length1,124948
definitionDH863116|Mus musculus domesticus DNA, BAC clone: B6Ng01-034F06, 5' end.DH863117|Mus musculus domesticus DNA, BAC clone: B6Ng01-034F06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgggcccactgttgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgataaataag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccatgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagctttggtgagtggaagcccgtgttgctgagcccaagcataaccccc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagacaggctgactgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcggctgaagtcaccttttggtgagcatt
tacatggggacacaaatatcttcacatcctttgcccatttggagaggtct
atcccacatactttcttccccagatgtcttttctcaccaatttttccaat
tgtaatctttccaagtccctgaccatcccagcccaatccattgggctaca
gcccatgagtcagtgaataatcgtacatctggccatttcttcttgcaaca
actgtaattccatgtgaactgccccaagttctgccaactgtgaagatttc
ccttcacctgtgtccttcaggttgtccaaaaagggttggaatgcttgcag
ctgtccatttctggggggtgcctgataactgcaagcatctgtaaccaggc
ttagtctttcttttcgtcagtcgatcatagggaaacccatgagcttatgc
gcatgtttggcgcaaggcatgtaacagataaaaccataggcattgacact
cttcatgtacttgctgtgccttcagactgctctggccgaccgtaaacctt
catatgtaaaactgctgtggcgtccctatactgcaggctgtattcaccct
cgcaagtgagtgatgacgtgctat
gaattcttaaatgtaacctcttaactcattttatgtttttgagaataaaa
taaaattttcttcagtttttaacattttatgttatttatttcagaatgaa
tgttttaagttttcaaaacactttcaagtatttaggaaaggcctacattc
taatattatttgttttttcatataaaatattttttgtttttaaatcatat
gtttatttgtatctatatatgtaaacatgtatgtgtgactgcatatcttt
ggagaactgaggaccacctggcagagtagcacctgatgggttctacagat
taagtgcaggtggtcagatattgtgcttggtatatttgcaggatgagtca
tctgaaaaatctcattttaatagtctttaatggtgttgatttctaaacaa
acatacgtatggacaaaacaaaattccaaacattaaatttacctttctaa
attttgttatgtaaaagaaccatccttgagtgataataaatacaattgat
aagcattatatttgtattacaataagacttatgatgttttaacatccttg
tgattttaattaaaattcaaattaattccacctgcagtgatcacagttat
agctataatagacaaacatttttgaaatacaccctctctgctatgtagta
ttagaaatgcacctttccgtgatttgatgacctatggcattttccctcca
ggataaggacatatctcatttactattaattatttatgtttttctttatc
tatcctgccttacaagcaaactctcttacttttaatattcaatttacatt
cacagtgttattttttttataggaatttattgaggtatttctctggaaat
ctttcttatggtctattttgcttatgtagcttacatcaaaaaaacatgtt
gcagttcttgataaattggcatttttaataaatggaacacatgattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112586488_112587432
seq2: B6Ng01-034F06.g_70_1017

seq1  GAATTCTTAAATGTAACCTCTTAACTCATTTTATGTTTTTGAGAATAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAATGTAACCTCTTAACTCATTTTATGTTTTTGAGAATAAAA  50

seq1  TAAAATTTTCTTCAGTTTTTAACATTTTATGTTATTTATTTCAGAATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTCTTCAGTTTTTAACATTTTATGTTATTTATTTCAGAATGAA  100

seq1  TGTTTTAAGTTTTCAAAACACTTTCAAGTATTTAGGAAAGGCCTACATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAGTTTTCAAAACACTTTCAAGTATTTAGGAAAGGCCTACATTC  150

seq1  TAATATTATTTGTTTTTTCATATAAAATATTTTTTGTTTTTAAATCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTATTTGTTTTTTCATATAAAATATTTTTTGTTTTTAAATCATAT  200

seq1  GTTTATTTGTATCTATATATGTAAACATGTATGTGTGACTGCATATCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTGTATCTATATATGTAAACATGTATGTGTGACTGCATATCTTT  250

seq1  GGAGAACTGAGGACCACCTGGCAGAGTAGCACCTGATGGGTTCTACAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAACTGAGGACCACCTGGCAGAGTAGCACCTGATGGGTTCTACAGAT  300

seq1  TAAGTGCAGGTGGTCAGATATTGTGCTTGGTATATTTGCAGGATGAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCAGGTGGTCAGATATTGTGCTTGGTATATTTGCAGGATGAGTCA  350

seq1  TCTGAAAAATCTCATTTTAATAGTCTTTAATGGTGTTGATTTCTAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAATCTCATTTTAATAGTCTTTAATGGTGTTGATTTCTAAACAA  400

seq1  ACATACGTATGGACAAAACAAAATTCCAAACATTAAATTTACCTTTCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACGTATGGACAAAACAAAATTCCAAACATTAAATTTACCTTTCTAA  450

seq1  ATTTTGTTATGTAAAAGAACCATCCTTGAGTGATAATAAATACAATTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTATGTAAAAGAACCATCCTTGAGTGATAATAAATACAATTGAT  500

seq1  AAGCATTATATTTGTATTACAATAAGACTTATGATG-TTTAACATCCTTG  549
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAGCATTATATTTGTATTACAATAAGACTTATGATGTTTTAACATCCTTG  550

seq1  TGATTTTAATTAAAATTCAAATTAATTCCACCTGCAGTGATCACAGTTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTAATTAAAATTCAAATTAATTCCACCTGCAGTGATCACAGTTAT  600

seq1  AGCTATAATAGACAAACATTTTTGAAATACACCCTCTCTGCTATGTAGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATAATAGACAAACATTTTTGAAATACACCCTCTCTGCTATGTAGTA  650

seq1  TTAGAAATGCACC-TTCCGTGATTTGATGACCTATGGCA-TTTCCCTCCA  697
      ||||||||||||| ||||||||||||||||||||||||| ||||||||||
seq2  TTAGAAATGCACCTTTCCGTGATTTGATGACCTATGGCATTTTCCCTCCA  700

seq1  GGATAAGGACATATCTCATTTACTATTAATTATTTATGTTTTTCTTTATC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGGACATATCTCATTTACTATTAATTATTTATGTTTTTCTTTATC  750

seq1  TATCCTGCCTTACAAGCAAACTCTCTTACTTTTAATATTCAATTTACATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGCCTTACAAGCAAACTCTCTTACTTTTAATATTCAATTTACATT  800

seq1  CACAGTGTTA-TTATTTTATAGGAATTTATTGAGGTATTTCTCTGGAAAT  846
      |||||||||| || ||||||||||||||||||||||||||||||||||||
seq2  CACAGTGTTATTTTTTTTATAGGAATTTATTGAGGTATTTCTCTGGAAAT  850

seq1  CTATCTTATTGTCTATTTTGCATTATGTAGCTAACATCAAAAAAACATGT  896
      || |||||| ||||||||||| |||||||||| |||||||||||||||||
seq2  CTTTCTTATGGTCTATTTTGC-TTATGTAGCTTACATCAAAAAAACATGT  899

seq1  TGCAGTTCTTGATAAATTGGCATTTTTAATAAATGGACTACATGATTAT  945
      |||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  TGCAGTTCTTGATAAATTGGCATTTTTAATAAATGGAACACATGATTAT  948