BAC Information

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BAC

Clone NameB6Ng01-035D11
Chromosome14 (Build37)
Map Location 116,926,098 - 117,061,394
singlet/doubletdoublet
Overlap genenone
Upstream geneGpc5
Downstream geneGpc6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035D11.bB6Ng01-035D11.g
ACCDH863747DH863748
length730907
definitionDH863747|Mus musculus domesticus DNA, BAC clone: B6Ng01-035D11, 5' end.DH863748|Mus musculus domesticus DNA, BAC clone: B6Ng01-035D11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,926,098 - 116,926,827)(117,060,439 - 117,061,394)
sequence
gaattcattcccaacaccagaaattcctaaaatctctatacaaagtgtgt
gtttgtgtgtctgtttgagaaatagagagagagaaagagagagagagaga
gagagagagagagagagagagagagagagagagagagagactaagaaaga
gataagaaaagaaaagtaaaaatcaataacaagaagccttagactttagc
tgggtgtttcacatctccagaggaggagttggttaggaatcatagataac
aattacttgcccaatattctgcataagcacagtgatacacgagtttattg
aatttacgaatattctcttttgaaattcccaataacattatcatctgtat
attactaatgagaggagatgggtttagggacagtatgggatttgtctgat
gccatgcaactaatgattgtataattagatcggtaagtttggtgcatttg
taaaagctcttcctagctcagcagcaatgttgttccacagtaatagagaa
gaaacacaggtgtttaacagcaaaactccccaggattatttaagtttcta
aacaagtgtttttaaatcaaagtacaatggactacagaaattcatcattg
tcaaacttcaaatctgtctagaagcacattgaaaaggaaaaatgtatatg
tgacctccttgttcaaaacttttctcatctcttatacactgagatcacat
cagatcctacacacacacacacacttacac
gaattctctctaggcatccatagagccattcatcacaccagaagatttag
ctgagaattttgcatatgttgattctctgcttatatctgtctctactggt
aaaatataaattccataaagggggttgcaatgttacatgctcagaaccta
ccatactattttccatagagtgggcttcagagatattcattgcatcagtt
actgtgagcagttctggggaagtaaaatcaagtcattttacttgattttc
ttcatatatatatatacatgtatatatatatatatatatatatacacaca
cacatatgtatatatatatatatatatatatacacacacacacacacata
tatatatatatatatatatatatatatatatatatatatacttttccaca
ctacacccaagagtttaaagtttattcatatcccagatacttagatttca
ctgatatttaagtgtttagctcagtgatattaaatcaggcagagtaacct
gtcttttgagaaccttccttgagttgtcagtacacttaatgttcagttct
gcacacatgttccaaccacagatggactcagtcttgagtaaaatacatac
accttagaaaacacatgtctgcatgggatatgagtacattagagctggcc
agaactgggaggatgtcagcaaggtcatctagcaacagctctagggtttg
tagttagagcaaaatgtgcacagtgagctgctaagagagatagctgctga
aaagggtagggtctgagttggaagaccattagtgatgccatttccagtgc
agagctgaatttgtctcatagatggggctgctgaagatgcacatgcagtg
ggctatgctctgctttcgactctacactggctgacttcatatagtgtcac
tgctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_116926098_116926827
seq2: B6Ng01-035D11.b_45_774

seq1  GAATTCATTCCCAACACCAGAAATTCCTAAAATCTCTATACAAAGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCCAACACCAGAAATTCCTAAAATCTCTATACAAAGTGTGT  50

seq1  GTTTGTGTGTCTGTTTGAGAAATAGAGAGAGAGAAAGAGAGAGAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTGTCTGTTTGAGAAATAGAGAGAGAGAAAGAGAGAGAGAGAGA  100

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTAAGAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTAAGAAAGA  150

seq1  GATAAGAAAAGAAAAGTAAAAATCAATAACAAGAAGCCTTAGACTTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGAAAAGAAAAGTAAAAATCAATAACAAGAAGCCTTAGACTTTAGC  200

seq1  TGGGTGTTTCACATCTCCAGAGGAGGAGTTGGTTAGGAATCATAGATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTTTCACATCTCCAGAGGAGGAGTTGGTTAGGAATCATAGATAAC  250

seq1  AATTACTTGCCCAATATTCTGCATAAGCACAGTGATACACGAGTTTATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTTGCCCAATATTCTGCATAAGCACAGTGATACACGAGTTTATTG  300

seq1  AATTTACGAATATTCTCTTTTGAAATTCCCAATAACATTATCATCTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACGAATATTCTCTTTTGAAATTCCCAATAACATTATCATCTGTAT  350

seq1  ATTACTAATGAGAGGAGATGGGTTTAGGGACAGTATGGGATTTGTCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAATGAGAGGAGATGGGTTTAGGGACAGTATGGGATTTGTCTGAT  400

seq1  GCCATGCAACTAATGATTGTATAATTAGATCGGTAAGTTTGGTGCATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGCAACTAATGATTGTATAATTAGATCGGTAAGTTTGGTGCATTTG  450

seq1  TAAAAGCTCTTCCTAGCTCAGCAGCAATGTTGTTCCACAGTAATAGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCTCTTCCTAGCTCAGCAGCAATGTTGTTCCACAGTAATAGAGAA  500

seq1  GAAACACAGGTGTTTAACAGCAAAACTCCCCAGGATTATTTAAGTTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACAGGTGTTTAACAGCAAAACTCCCCAGGATTATTTAAGTTTCTA  550

seq1  AACAAGTGTTTTTAAATCAAAGTACAATGGACTACAG-AAGTCATCATTG  599
      ||||||||||||||||||||||||||||||||||||| || |||||||||
seq2  AACAAGTGTTTTTAAATCAAAGTACAATGGACTACAGAAATTCATCATTG  600

seq1  TCAAACTTCAAATCTGTCTAGAAGCACATTGAAAAGGAAAAATGTATATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTTCAAATCTGTCTAGAAGCACATTGAAAAGGAAAAATGTATATG  650

seq1  TGACCTCCTTGTTCAAAACTTTTCTCATCTCTTATACACTGAGATCACAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGACCTCCTTGTTCAAAACTTTTCTCATCTCTTATACACTGAGATCACA-  699

seq1  TCAGATCCTACACACACACACACACATACAC  730
      ||||||||||||||||||||||||| |||||
seq2  TCAGATCCTACACACACACACACACTTACAC  730

seq1: chr14_117060439_117061394
seq2: B6Ng01-035D11.g_66_972 (reverse)

seq1  TGCAGCAGTGACAACATAATTAATGAAAAGTCAGCCAGTTGTAGAAAGGT  50
      |||||||||||||  ||     |||  ||||||||||| ||||||   ||
seq2  TGCAGCAGTGACACTAT-----ATG--AAGTCAGCCAG-TGTAGA---GT  39

seq1  CCAGAAAGGCCAAGAAGCCAATAGCCCCCACCTGCCATTGCTGCACTCCT  100
      |  |||||  ||   |||  |||||||    ||| |||   ||||   ||
seq2  C--GAAAG--CA--GAGC--ATAGCCC---ACTG-CAT--GTGCA--TCT  73

seq1  TCCAAGACAGCCCCATTCTAATTGGGAACAAATTCAGCTCTGCACCTGGG  150
      ||  || |||||||| ||||  || | ||||||||||||||||||    |
seq2  TC--AG-CAGCCCCA-TCTA--TGAG-ACAAATTCAGCTCTGCAC---TG  113

seq1  GAAATGGCCATTCCACTAATGGTCTTCCAAACTCAGACCCTACCCTTTTC  200
      ||||||| |||  ||||||||||||||| |||||||||||||||||||| 
seq2  GAAATGG-CAT--CACTAATGGTCTTCC-AACTCAGACCCTACCCTTTT-  158

seq1  CAGCAGCTATCTTCTCTTAGCAGCTCACTGTGCACATTTTGCTCTAACTA  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCTATC-TCTCTTAGCAGCTCACTGTGCACATTTTGCTCTAACTA  207

seq1  CAAACCCTAGAGCTGTTGCTAGATGACCTTGCTGACATCCTCCCAGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCTAGAGCTGTTGCTAGATGACCTTGCTGACATCCTCCCAGTTCT  257

seq1  GGCCAGCTCTAATGTACTCATATCCCATGCAGACATGTGTTTTCTAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCTCTAATGTACTCATATCCCATGCAGACATGTGTTTTCTAAGGT  307

seq1  GTATGTATTTTACTCAAGACTGAGTCCATCTGTGGTTGGAACATGTGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTATTTTACTCAAGACTGAGTCCATCTGTGGTTGGAACATGTGTGC  357

seq1  AGAACTGAACATTAAGTGTACTGACAACTCAAGGAAGGTTCTCAAAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGAACATTAAGTGTACTGACAACTCAAGGAAGGTTCTCAAAAGAC  407

seq1  AGGTTACTCTGCCTGATTTAATATCACTGAGCTAAACACTTAAATATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTACTCTGCCTGATTTAATATCACTGAGCTAAACACTTAAATATCAG  457

seq1  TGAAATCTAAGTATCTGGGATATGAATAAACTTTAAACTCTTGGGTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTAAGTATCTGGGATATGAATAAACTTTAAACTCTTGGGTGTAG  507

seq1  TGTGGAAAAGTATATATATATATATATATATATATATATATATATATATA  600
      ||||||||||    ||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAAG----TATATATATATATATATATATATATATATATATATA  553

seq1  TATATATGTGTGTGTGTGTGTGTATATATATATATATATATATATACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGTGTGTGTGTGTGTGTATATATATATATATATATATATACATA  603

seq1  TGTGTGTGTGTATATATATATATATATATATATATACATGTATATATATA  700
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTG--TATATATATATATATATATATATACATGTATATATATA  651

seq1  TATGAAGAAAATCAAGTAAAATGACTTGATTTTACTTCCCCAGAACTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAAAATCAAGTAAAATGACTTGATTTTACTTCCCCAGAACTGCT  701

seq1  CACAGTAACTGATGCAATGAATATCTCTGAAGCCCACTCTATGGAAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAACTGATGCAATGAATATCTCTGAAGCCCACTCTATGGAAAATA  751

seq1  GTATGGTAGGTTCTGAGCATGTAACATTGCAACCCCCTTTATGGAATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTAGGTTCTGAGCATGTAACATTGCAACCCCCTTTATGGAATTTA  801

seq1  TATTTTACCAGTAGAGACAGATATAAGCAGAGAATCAACATATGCAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTACCAGTAGAGACAGATATAAGCAGAGAATCAACATATGCAAAAT  851

seq1  TCTCAGCTAAATCTTCTGGTGTGATGAATGGCTCTATGGATGCCTAGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTAAATCTTCTGGTGTGATGAATGGCTCTATGGATGCCTAGAGA  901

seq1  GAATTC  956
      ||||||
seq2  GAATTC  907