BAC Information

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BAC

Clone NameB6Ng01-035P24
Chromosome14 (Build37)
Map Location 80,499,501 - 80,500,030
singlet/doubletsinglet
Overlap genenone
Upstream gene1300010F03Rik, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035P24.bB6Ng01-035P24.g
ACCDH864317DH864318
length1,124845
definitionDH864317|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P24, 5' end.DH864318|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaagggctaagaaacacttgagatatgt
tcaacatccttaatcatccgggaaatgcaaatcaaaacaaccctgagatt
caacctcaaaccagtcagaatggctagtatcaaaaattcaggtgacagca
gatgctggtgaggatgtggagaaagaggaacactcctccattgctggtgg
gattacaaacttgtacaatcactctggaaattagtctggcgtttcctcag
aaagctggacatagtacataggtgagaatacctcacctgggcatataccc
agaagatgctccaactggtaagaaggacagtgctccactatgttcatagc
agacttatttataatagccagaagctggaaagaacccagctgtccctcaa
cagaggaatgtgtacagaaaatgtggtacatttacataatggaatactac
tcagctattaaaagcaacgaatttatttaatttttaggctaatggatgta
tctggaggatatatcctgagtgaggtaacctaattacaaaagaagtccct
tgatatgtcctcactgataagtgtatattagcccagaaacgtagaatatt
caagatacaatttccaaaacacaagaaaatcaagatggaagaccatgggt
ggatacttcattcctccctagaatagggaataaaatatccatggaaggag
ttacagagacaaagtttggagctaagacgaaaggatggaccatccagaga
ctgccccaccagtgtgtccatcccataatcagacaccaatcgcagacact
attgcatatgccagcaagattttgctgaaagaaccctgatatagctgtct
ttttgtgaggctatgccagtgcctggcaaatacagaagtgaatgctttac
agtcagctatggatggatcacaggctccaatgagagctagagaagtacca
agagctaaagggatctgcaccctatgtgacacatatgactacagtatccc
gatgtcatgacttagctgcatatgtagcagagatgctagtcgcatactag
gagagaggcctgtcttgcaccttatctggctcagtaaggactcagggcag
atgggaatgaaatataggaaaggc
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaaaatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactccttcattgttggtg
ggattgcaagcttgtaaaaccactctggaaataagtctggtggttcctca
gaaaactggacatagtactaccagaggatcccgcaatacctctcctgggc
atatatccagaagatgttccaaccggtaaaaaggacacatgccccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atgaatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacacaatatgtactcacagataagtggatattagcccagaaac
ttagaatacccaagatataagatacaatttgctaaacgcatgaaactcaa
gaagaacgaagaccaaagtgtggacactttgcctcttcttagaattggga
acaaaacacccatttgaagaagttacagagacacagtttggagctgagac
gaagggatggaccatctagagactgccatatctggtgatccatcccataa
tcagccttctaaaacactgacaccattgcatacactgacagttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80499501_80500030
seq2: B6Ng01-035P24.g_220_749 (reverse)

seq1  CAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATATGTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||  |||| |
seq2  CAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGCGTTTAG  50

seq1  CAAGTTGTAACTTATGTCTTGGTTATTCTAAGTTTCTGGGCTAATATCCA  100
      ||| ||||| ||||| |||||| |||||||||||||||||||||||||||
seq2  CAAATTGTATCTTATATCTTGGGTATTCTAAGTTTCTGGGCTAATATCCA  100

seq1  CTTATCAATGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTC  150
      ||||||  |||||||||||  |||||||||||||||||||||||||||||
seq2  CTTATCTGTGAGTACATATTGTGTGAGTTCTTTTGTGATTGGGTTACCTC  150

seq1  ACTCAGGATGATACCCTCCAGATCCATCTATTTGCCTAGGAATTTCATAA  200
      |||||||||||| |||||||| |||||  |||||||||||||||||||||
seq2  ACTCAGGATGATGCCCTCCAGGTCCATTCATTTGCCTAGGAATTTCATAA  200

seq1  ATTCATTCTTTTTAATAGCTGAGTATTACTCCATTGTGTAAATGTACCAC  250
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCAC  250

seq1  ATTTTTTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCT  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCT  300

seq1  TCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTTTCCT  350
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  TCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGGGCATGTGTCCT  350

seq1  TCTTATCGGTTGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGTG  400
      | ||| |||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTTACCGGTTGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGCG  400

seq1  GGATCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGA  450
      ||||||||||||||||||||||||| |||||||||||||  ||||||| |
seq2  GGATCCTCTGGTAGTACTATGTCCAGTTTTCTGAGGAACCACCAGACTTA  450

seq1  TTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAATAATGGAGGAGTG  500
      |||||||||||||| |||||||||||||||||||||| |||| |||||||
seq2  TTTCCAGAGTGGTTTTACAAGCTTGCAATCCCACCAACAATGAAGGAGTG  500

seq1  TTCCTCTTTCTCCACATCCTCACCAGCATC  530
      ||||||||||||||||||||| ||||||||
seq2  TTCCTCTTTCTCCACATCCTCGCCAGCATC  530