BAC Information

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BAC

Clone NameB6Ng01-036F20
Chromosome14 (Build37)
Map Location 110,848,810 - 110,992,453
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036F20.bB6Ng01-036F20.g
ACCDH864561DH864562
length949589
definitionDH864561|Mus musculus domesticus DNA, BAC clone: B6Ng01-036F20, 5' end.DH864562|Mus musculus domesticus DNA, BAC clone: B6Ng01-036F20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,848,810 - 110,849,724)(110,991,865 - 110,992,453)
sequence
gaattcacttgctaataacagaggcaaaacagacacctttagaaaaaaaa
gttcctggtattcaatccacctgagtgacttgaattataggcatcgtagc
agaaatgtattaagtgcaaatcacaatagtaattaacctatgttgaaatg
agtgttcgcataatttataaaagtgtatttatttactgttaaaatctctg
taactattctgttattagatactctatattgcaggtatagtacgacgttg
agttattcaatactctacattgcaggtgtagtactacattaagttagtag
atactctatattgcaggtgacttctccagcaccctctctccgactccatt
tcctttttagcagaagttaagtgcaagttctaccactaatttaccattac
acagaattacctggcttgttaaacactttgaacatttttttcattgttat
aattatgcagcaaactaattactaaaatttagagaaaaatatttaatcta
aaggaatgtagaaattaatctagacagttaattagactctctctctctct
ctctctctctctctctctatatatatatatatatatatatatatatatat
atttaaaattactctactttgttctcatggggaacatgcttgttttcttt
tcttataatttttatatatttttattttttgtattagatgttttctttat
ttacatttcaaatgttatccccttttctgctttcccctctgaaaacctat
ccactcccccttcccctgctcatcaacccacccaatctcaattcctggcc
ctggcatttcctccggagtggggcatagagccttcacaggaccaagggcc
tcttcccctcactgatgaccaactgaacaattctcagctacatatgcagc
tatagacatgagtcccaccatgtgttttctttgtgtggttagtccctgg
gaattccctgccacttagtatttctagttgtttcttataactgaaaaggt
tagaatataatgctaattttaattaaaattatctaagccaagaaaaatag
agtgtttttttaaaaattatcattggaataaagaagggaaaggaagctta
gtttttcttctcttttgttttgtgatttagggtgggtggtccaaattagt
taatatttggaaaacaaaatgatagtaaaaatattccagtaatcaaacta
atttaatctatttggacttgagagtaccttgataagattctgtgatttaa
ttcacagtatattagacagttgggactggctaagatccagtagagattcc
tcaattagaatgtaaattttgaaatagatgaaggatggactatagtgagc
atttctgatgttggaaggtttgagaatgtgggaatagggcttagagccag
gaagaacgcaagacacaaaccagagccaaagaagaatgagacttgagcca
ggactattatcaagacactaaggtgaaaggttagcaatgtgggaaacaga
gatgggaagcaagtagggaatatgtgggtgtgggttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110848810_110849724
seq2: B6Ng01-036F20.b_46_962

seq1  GAATTCACTTGCTAATAACAGAGGCAAAACAGACACCTTTAGAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGCTAATAACAGAGGCAAAACAGACACCTTTAGAAAAAAAA  50

seq1  GTTCCTGGTATTCAATCCACCTGAGTGACTTGAATTATAGGCATCGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGGTATTCAATCCACCTGAGTGACTTGAATTATAGGCATCGTAGC  100

seq1  AGAAATGTATTAAGTGCAAATCACAATAGTAATTAACCTATGTTGAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTATTAAGTGCAAATCACAATAGTAATTAACCTATGTTGAAATG  150

seq1  AGTGTTCGCATAATTTATAAAAGTGTATTTATTTACTGTTAAAATCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCGCATAATTTATAAAAGTGTATTTATTTACTGTTAAAATCTCTG  200

seq1  TAACTATTCTGTTATTAGATACTCTATATTGCAGGTATAGTACGACGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATTCTGTTATTAGATACTCTATATTGCAGGTATAGTACGACGTTG  250

seq1  AGTTATTCAATACTCTACATTGCAGGTGTAGTACTACATTAAGTTAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTCAATACTCTACATTGCAGGTGTAGTACTACATTAAGTTAGTAG  300

seq1  ATACTCTATATTGCAGGTGACTTCTCCAGCACCCTCTCTCCGACTCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTATATTGCAGGTGACTTCTCCAGCACCCTCTCTCCGACTCCATT  350

seq1  TCCTTTTTAGCAGAAGTTAAGTGCAAGTTCTACCACTAATTTACCATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTAGCAGAAGTTAAGTGCAAGTTCTACCACTAATTTACCATTAC  400

seq1  ACAGAATTACCTGGCTTGTTAAACACTTTGAACATTTTTTTCATTGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATTACCTGGCTTGTTAAACACTTTGAACATTTTTTTCATTGTTAT  450

seq1  AATTATGCAGCAAACTAATTACTAAAATTTAGAGAAAAATATTTAATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGCAGCAAACTAATTACTAAAATTTAGAGAAAAATATTTAATCTA  500

seq1  AAGGAATGTAGAAATTAATCTAGACAGTTAATTAGACTCTCTCTCTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATGTAGAAATTAATCTAGACAGTTAATTAGACTCTCTCTCTCTCT  550

seq1  CTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATAT  600

seq1  ATTTAAAATTACTCTACTTTGTTCTCATGGGGAACATGCTTGTTTTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATTACTCTACTTTGTTCTCATGGGGAACATGCTTGTTTTCTTT  650

seq1  TCTTATAATTTTTATATATTTTTATTTTTTGTATTAGATGTTTTCTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAATTTTTATATATTTTTATTTTTTGTATTAGATGTTTTCTTTAT  700

seq1  TTACATTTCAAATGTTATCCCCTTTCCTGCTTTCCCCTCTGAAAACCTAT  750
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTACATTTCAAATGTTATCCCCTTTTCTGCTTTCCCCTCTGAAAACCTAT  750

seq1  CCACTCCCCCTTCCCCTGCTCATCAACCCACCCAATCTCAATTCCTGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCCCTTCCCCTGCTCATCAACCCACCCAATCTCAATTCCTGGCC  800

seq1  CTGGCA-TTCCTCCGGAGTGGGGCATAGAGCCTTCACAGGACCAAGGGCC  849
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATTTCCTCCGGAGTGGGGCATAGAGCCTTCACAGGACCAAGGGCC  850

seq1  TC-TCCCCTCACTGATGACCAACTGAACCATTCTCAGCTACATATGCAGC  898
      || ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCTTCCCCTCACTGATGACCAACTGAACAATTCTCAGCTACATATGCAGC  900

seq1  TATAGACATGAGTCCCA  915
      |||||||||||||||||
seq2  TATAGACATGAGTCCCA  917

seq1: chr14_110991865_110992453
seq2: B6Ng01-036F20.g_66_654 (reverse)

seq1  ACCAACCCACACCCACATATTCCCTACTTGCTTCCCATCTCTGTTTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCCACACCCACATATTCCCTACTTGCTTCCCATCTCTGTTTCCCA  50

seq1  CATTGCTAACCTTTCACCTTAGTGTCTTGATAATAGTCCTGGCTCAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTAACCTTTCACCTTAGTGTCTTGATAATAGTCCTGGCTCAAGTC  100

seq1  TCATTCTTCTTTGGCTCTGGTTTGTGTCTTGCGTTCTTCCTGGCTCTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTTCTTTGGCTCTGGTTTGTGTCTTGCGTTCTTCCTGGCTCTAAG  150

seq1  CCCTATTCCCACATTCTCAAACCTTCCAACATCAGAAATGCTCACTATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATTCCCACATTCTCAAACCTTCCAACATCAGAAATGCTCACTATAG  200

seq1  TCCATCCTTCATCTATTTCAAAATTTACATTCTAATTGAGGAATCTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTTCATCTATTTCAAAATTTACATTCTAATTGAGGAATCTCTAC  250

seq1  TGGATCTTAGCCAGTCCCAACTGTCTAATATACTGTGAATTAAATCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTTAGCCAGTCCCAACTGTCTAATATACTGTGAATTAAATCACAG  300

seq1  AATCTTATCAAGGTACTCTCAAGTCCAAATAGATTAAATTAGTTTGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTATCAAGGTACTCTCAAGTCCAAATAGATTAAATTAGTTTGATTA  350

seq1  CTGGAATATTTTTACTATCATTTTGTTTTCCAAATATTAACTAATTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATATTTTTACTATCATTTTGTTTTCCAAATATTAACTAATTTGGA  400

seq1  CCACCCACCCTAAATCACAAAACAAAAGAGAAGAAAAACTAAGCTTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACCCTAAATCACAAAACAAAAGAGAAGAAAAACTAAGCTTCCTT  450

seq1  TCCCTTCTTTATTCCAATGATAATTTTTAAAAAAACACTCTATTTTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTTTATTCCAATGATAATTTTTAAAAAAACACTCTATTTTTCTT  500

seq1  GGCTTAGATAATTTTAATTAAAATTAGCATTATATTCTAACCTTTTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGATAATTTTAATTAAAATTAGCATTATATTCTAACCTTTTCAGT  550

seq1  TATAAGAAACAACTAGAAATACTAAGTGGCAGGGAATTC  589
      |||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAAACAACTAGAAATACTAAGTGGCAGGGAATTC  589