BAC Information

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BAC

Clone NameB6Ng01-038K02
Chromosome14 (Build37)
Map Location 66,086,377 - 66,304,634
singlet/doubletdoublet
Overlap geneElp3, Gm600, Scara5
Upstream geneKif13b, Hmbox1, LOC100043657, D14Ertd231e, Extl3, Fzd3, LOC668286, Fbxo16, Zfp395, Pnoc
Downstream genePbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2, Ptk2b, LOC100043676, Trim35, Stmn4, Adra1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038K02.bB6Ng01-038K02.g
ACCDH866136DH866137
length700211
definitionDH866136|Mus musculus domesticus DNA, BAC clone: B6Ng01-038K02, 5' end.DH866137|Mus musculus domesticus DNA, BAC clone: B6Ng01-038K02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,303,935 - 66,304,634)(66,086,377 - 66,086,587)
sequence
gaattctctatctctttctacactagaatgcagctggttttactcctgca
catgtaggctctgggaacacttctacttctggtgagagctagcttactga
ccctttacagagaaaagcctgcctcctggaagagctagggcggtaggcac
agcattgtgtaatgctgtacacattatcacaatgggagtcccatctgtct
tactctgggtctcccttccttgagtctcagaacacgtaggaggaggagac
tgactgctatgtacattgctgagtcagatccaacctttgccatttgtatg
catgtcactagcttgccacaggaagagtgtcgagttatacgttgcacagt
agcacaatatttttttttgcatgaaaaaaagagaagcccccttcctttta
tcttttatttgaacacccacttgtgatggatccctttgtcaaaaaacaca
aggagactagaccttcctttgaaatggcatttttttttaggaagccttaa
tcccttcctaataataaagaaagcagttccaaatacagcaggctaagggc
ttcagacatatatttccacaaatcttcggacaagcagaacaaaattacca
tagcaagatgcttagaggatataacaccaagggaagggaagagattaaga
tgaagaccaaggagcttttgttatcattgtcctttttcctgtgtgtgtgt

cctaccaagtctgatgactggagtttggagcccagaacacaaatgtgtca
ggagagaaccattgtcctctggcttccatatgtaccccatggggctccta
tccgtgtgtatacatgcacatttgggaagggatgggaggggataaaagag
agaggcaagttgttagtatccacaccaaactatttattcagaaactgaaa
gcagtcccaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_66303935_66304634
seq2: B6Ng01-038K02.b_31_730 (reverse)

seq1  ACACACACACAGGAAAAAGGACAATGATAACAAAAGCTCCTTGGTCTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACAGGAAAAAGGACAATGATAACAAAAGCTCCTTGGTCTTCA  50

seq1  TCTTAATCTCTTCCCTTCCCTTGGTGTTATATCCTCTAAGCATCTTGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATCTCTTCCCTTCCCTTGGTGTTATATCCTCTAAGCATCTTGCTA  100

seq1  TGGTAATTTTGTTCTGCTTGTCCGAAGATTTGTGGAAATATATGTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATTTTGTTCTGCTTGTCCGAAGATTTGTGGAAATATATGTCTGAA  150

seq1  GCCCTTAGCCTGCTGTATTTGGAACTGCTTTCTTTATTATTAGGAAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTAGCCTGCTGTATTTGGAACTGCTTTCTTTATTATTAGGAAGGGA  200

seq1  TTAAGGCTTCCTAAAAAAAAATGCCATTTCAAAGGAAGGTCTAGTCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGCTTCCTAAAAAAAAATGCCATTTCAAAGGAAGGTCTAGTCTCCT  250

seq1  TGTGTTTTTTGACAAAGGGATCCATCACAAGTGGGTGTTCAAATAAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTTTGACAAAGGGATCCATCACAAGTGGGTGTTCAAATAAAAGA  300

seq1  TAAAAGGAAGGGGGCTTCTCTTTTTTTCATGCAAAAAAAAATATTGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGAAGGGGGCTTCTCTTTTTTTCATGCAAAAAAAAATATTGTGCT  350

seq1  ACTGTGCAACGTATAACTCGACACTCTTCCTGTGGCAAGCTAGTGACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCAACGTATAACTCGACACTCTTCCTGTGGCAAGCTAGTGACATG  400

seq1  CATACAAATGGCAAAGGTTGGATCTGACTCAGCAATGTACATAGCAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAATGGCAAAGGTTGGATCTGACTCAGCAATGTACATAGCAGTCA  450

seq1  GTCTCCTCCTCCTACGTGTTCTGAGACTCAAGGAAGGGAGACCCAGAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTCCTCCTACGTGTTCTGAGACTCAAGGAAGGGAGACCCAGAGTA  500

seq1  AGACAGATGGGACTCCCATTGTGATAATGTGTACAGCATTACACAATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGATGGGACTCCCATTGTGATAATGTGTACAGCATTACACAATGCT  550

seq1  GTGCCTACCGCCCTAGCTCTTCCAGGAGGCAGGCTTTTCTCTGTAAAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTACCGCCCTAGCTCTTCCAGGAGGCAGGCTTTTCTCTGTAAAGGG  600

seq1  TCAGTAAGCTAGCTCTCACCAGAAGTAGAAGTGTTCCCAGAGCCTACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAGCTAGCTCTCACCAGAAGTAGAAGTGTTCCCAGAGCCTACATG  650

seq1  TGCAGGAGTAAAACCAGCTGCATTCTAGTGTAGAAAGAGATAGAGAATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAGTAAAACCAGCTGCATTCTAGTGTAGAAAGAGATAGAGAATTC  700

seq1: chr14_66086377_66086587
seq2: B6Ng01-038K02.g_73_283

seq1  CCTACCAAGTCTGATGACTGGAGTTTGGAGCCCAGAACACAAATGTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCTACCAAGTCTGATGACTGGAGTTTGGAGCCCAGAACACAAATGTGTCA  50

seq1  GGAGAGAACCATTGTCCTCTGGCTTCCATATGTACCCCATGGGGCTCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAACCATTGTCCTCTGGCTTCCATATGTACCCCATGGGGCTCCTA  100

seq1  TCCGTGTGTATACATGCACATTTGGGAAGGGATGGGAGGGGATAAAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGTGTATACATGCACATTTGGGAAGGGATGGGAGGGGATAAAAGAG  150

seq1  AGAGGCAAGTTGTTAGTATCCACACCAAACTACTAAGTCAGAAACTGAGA  200
      |||||||||||||||||||||||||||||||| | | ||||||||||| |
seq2  AGAGGCAAGTTGTTAGTATCCACACCAAACTATTTATTCAGAAACTGAAA  200

seq1  GCAGTCCCAAC  211
      |||||||||||
seq2  GCAGTCCCAAC  211