BAC Information

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BAC

Clone NameB6Ng01-039L24
Chromosome14 (Build37)
Map Location 51,142,732 - 51,143,857
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc35f4, 3632451O06Rik, LOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742
Downstream geneOlfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039L24.bB6Ng01-039L24.g
ACCDH866929DH866930
length1,1241,159
definitionDH866929|Mus musculus domesticus DNA, BAC clone: B6Ng01-039L24, 5' end.DH866930|Mus musculus domesticus DNA, BAC clone: B6Ng01-039L24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgaaatatccacaaattaaaaccttatgtactaccaacata
acagaatacttaaaattatcaatcacaaataagaattataatgtcttaga
tattatggcaaatctcccttggaattagaactgattactctctatgagtt
tataagtatggaatcaaattttccagaaggcaaatagaactaatggataa
caaattatttcagatactctaaacatcaaataaaatatttttacaaaata
cagataactatagacaagggagaaacaaacgatctaaccaaggctatgat
tggctagtgaaagtatttgttttcctcaactgatacctttacttctttag
gccgtcctgtgttcttgactatctcaactttagacataatatttccatta
tgtcataggtaaatgttatgttagtttcagagggtggaataaaaaagaaa
tcacaccttttataaagcctgataaatttgatatcattcaaggactaact
ccttagtagatttacatgtttcctctcctgaagactgttttcctggcttc
tcagacctacctttccagacacaagcttttataatgctgtgggacaaaag
atatttaacttccacattcacagagtttgataaatttataaatttataca
tttctttaatgtgcaatcaataaaatacaatgtaagcatttcaaagtgta
attgtcttttttgagcaacctgcgtttgtgcttctaggctataggcatcc
atgtagattaaattatttcttatctgtattgaggttggagctgttgagtt
tttattaacatcatgcagtgtgttgttttatgaagctccctctcagggta
gtttcccaaggataagctataagatagtctcctgcaaagtaggaaacttt
tgaaagctttcaatgttaataagttatatgtgagttaaggaaaagttaag
ttttcactagactgctgttacttattctttgtcagttagtgcttaaatat
gaatcttcctttgctaacatattgtgtgattgatcttgttccttctggta
ttggactactttctgtgtgttccacaaatcggggatttagaagtagaagt
caggctctgtgggaatctggacga
gaattcttcagggtggctacacaattgtgtaattccatgaacagaaaacg
agggttcccttttgcccacattccctctggcatttgctgtaggccattct
gttaatcttttgcatcctcattggtaagacaaaatcttaaagttggtttt
atttgtatttccctagtagctaggagtgatgaacaattttttataaatat
ttttaaccaatttttcttctttttcaaactctcaagtctggttccaggcc
catttttgtaaggggccatttgatatttttttaaatatcttttgagttct
tcatatattctggatattaaacctctgtcagaaaaatacctaacaaaaat
tttcttccattctttgggcttcctctttacctgattgattgcttccttag
ctgtgccaacactttttaagtgttatgaggtcctatttgctaattccaga
gcaaatggagtcatatttagggagtctttttctgcacaaatgtcatggag
ggcactgtctatgtttcctccttgcaggttaagtgctacaggttttggat
ttaggttcttgatccattcagagttagtttctgtgcaaggtcatgaatag
agatctaatttcattcctttacatagacacccagtttactaagcaccatt
tgttgaagataagttcttttacctcatatgagatagcgataacagggtcc
cttcagcaaaatcgttctggtattgtgcaatagtgtctgggtttggtggc
tgattatgggatggatccccgggtggggtagtctctggatagtccatcct
ttcgtcttagctccaaactttgtctctgtaactcctttcatgggtatttt
gttccaaatctaaggaggaatgaaatgcctggcaatacagaagtggctgc
tcacaatcatctataagatggaacacaagccccaatggagagctagagaa
gcacccaaagagctgaaggggtctgcaccctataggtgaacacatatgaa
ctactagtacccgcagagctatatctctagctgctatgtagcagaagaag
gcctagtcaacctcacggccatcattggaaagagggcctttgattacaac
ttattgtccaatcaagggaaatgctgaggccagaaaggaatgtgtgctgg
tgtagcgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51142732_51143857
seq2: B6Ng01-039L24.b_44_1167 (reverse)

seq1  TCGTCCAGAATTCCACAGAGCCCTGACCTCCTACTTCTAAAT-CCCGATT  49
      ||||||||| | |||||||| ||||| || |||||||||||| |||||||
seq2  TCGTCCAGATTCCCACAGAG-CCTGA-CTTCTACTTCTAAATCCCCGATT  48

seq1  TGTGGGACACAACAGAAAGTAGT-CAATACCAGAAGGAAC-AGATCAATT  97
      ||||| |||| |||||||||||| |||||||||||||||| ||||||| |
seq2  TGTGGAACAC-ACAGAAAGTAGTCCAATACCAGAAGGAACAAGATCAA-T  96

seq1  CACAACAATATGTTAGCAAAGG-AGATTCATATTTAAGCACTAACTGACA  146
      ||| |||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAC-ACAATATGTTAGCAAAGGAAGATTCATATTTAAGCACTAACTGACA  145

seq1  AAGAATAAGTAACAGCAGTCTAGTGAAAACTTAACTTTTCCTTAACTCAC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAGTAACAGCAGTCTAGTGAAAACTTAACTTTTCCTTAACTCAC  195

seq1  ATATAACTTTATTAACATTGAAAGCTTTCAAAAGTTTCCTACTTTGCAGG  246
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAC-TTATTAACATTGAAAGCTTTCAAAAGTTTCCTACTTTGCAGG  244

seq1  AGACTATCTTATAGCTTATCCTTGGGAAACTACCCTGAGAGGGAGCTTCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATCTTATAGCTTATCCTTGGGAAACTACCCTGAGAGGGAGCTTCA  294

seq1  TAAAACAACACACTGCATGATGTTAATAAAAACTCAACAGCTCCAACCTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAACACACTGCATGATGTTAATAAAAACTCAACAGCTCCAACCTC  344

seq1  AATACAGATAAGAAATAATTTAATCTACATGGATGCCTATAGCCTAGAAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGATAAGAAATAATTTAATCTACATGGATGCCTATAGCCTAGAAG  394

seq1  CACAAACGCAGGTTGCTCAAAAAAGACAATTACACTTTGAAATGCTTACA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACGCAGGTTGCTCAAAAAAGACAATTACACTTTGAAATGCTTACA  444

seq1  TTGTATTTTATTGATTGCACATTAAAGAAATGTATAAATTTATAAATTTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTTATTGATTGCACATTAAAGAAATGTATAAATTTATAAATTTA  494

seq1  TCAAACTCTGTGAATGTGGAAGTTAAATATCTTTTGTCCCACAGCATTAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCTGTGAATGTGGAAGTTAAATATCTTTTGTCCCACAGCATTAT  544

seq1  AAAAGCTTGTGTCTGGAAAGGTAGGTCTGAGAAGCCAGGAAAACAGTCTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTGTGTCTGGAAAGGTAGGTCTGAGAAGCCAGGAAAACAGTCTT  594

seq1  CAGGAGAGGAAACATGTAAATCTACTAAGGAGTTAGTCCTTGAATGATAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGGAAACATGTAAATCTACTAAGGAGTTAGTCCTTGAATGATAT  644

seq1  CAAATTTATCAGGCTTTATAAAAGGTGTGATTTCTTTTTTATTCCACCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTATCAGGCTTTATAAAAGGTGTGATTTCTTTTTTATTCCACCCT  694

seq1  CTGAAACTAACATAACATTTACCTATGACATAATGGAAATATTATGTCTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACTAACATAACATTTACCTATGACATAATGGAAATATTATGTCTA  744

seq1  AAGTTGAGATAGTCAAGAACACAGGACGGCCTAAAGAAGTAAAGGTATCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAGATAGTCAAGAACACAGGACGGCCTAAAGAAGTAAAGGTATCA  794

seq1  GTTGAGGAAAACAAATACTTTCACTAGCCAATCATAGCCTTGGTTAGATC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGAAAACAAATACTTTCACTAGCCAATCATAGCCTTGGTTAGATC  844

seq1  GTTTGTTTCTCCCTTGTCTATAGTTATCTGTATTTTGTAAAAATATTTTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTCTCCCTTGTCTATAGTTATCTGTATTTTGTAAAAATATTTTA  894

seq1  TTTGATGTTTAGAGTATCTGAAATAATTTGTTATCCATTAGTTCTATTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGTTTAGAGTATCTGAAATAATTTGTTATCCATTAGTTCTATTTG  944

seq1  CCTTCTGGAAAATTTGATTCCATACTTATAAACTCATAGAGAGTAATCAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGGAAAATTTGATTCCATACTTATAAACTCATAGAGAGTAATCAG  994

seq1  TTCTAATTCCAAGGGAGATTTGCCATAATATCTAAGACATTATAATTCTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTCCAAGGGAGATTTGCCATAATATCTAAGACATTATAATTCTT  1044

seq1  ATTTGTGATTGATAATTTTAAGTATTCTGTTATGTTGGTAGTACATAAGG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGATTGATAATTTTAAGTATTCTGTTATGTTGGTAGTACATAAGG  1094

seq1  TTTTAATTTGTGGATATTTCAAAAGAATTC  1126
      ||||||||||||||||||||||||||||||
seq2  TTTTAATTTGTGGATATTTCAAAAGAATTC  1124