BAC Information

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BAC

Clone NameB6Ng01-041M19
Chromosome14 (Build37)
Map Location 66,714,485 - 66,856,687
singlet/doubletdoublet
Overlap geneEphx2, Chrna2, Ptk2b
Upstream geneFzd3, LOC668286, Fbxo16, Zfp395, Pnoc, Elp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675
Downstream geneLOC100043676, Trim35, Stmn4, Adra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041M19.bB6Ng01-041M19.g
ACCDH868358DH868359
length922563
definitionDH868358|Mus musculus domesticus DNA, BAC clone: B6Ng01-041M19, 5' end.DH868359|Mus musculus domesticus DNA, BAC clone: B6Ng01-041M19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,714,485 - 66,715,406)(66,856,119 - 66,856,687)
sequence
gaattctccaaaaagatcatcatgaaggaatgactcaccagcttatccag
gaatgtcaccatctccttaaaaaagagcacacagacacagcatcagacag
gtaaggtggagagaagcttagctgcctgccataccacacactgtcagcac
aagccccaggggaactcatgccatggagacccctattccttcctggacca
cagtggtcctccctctgtctcctgagacctcttgcagtctctgatgggtt
ccgtcctgaggaagcacacacaaacaccttcacttcatattctgccatag
cttctaggatctcaacagaccccaagaaatcttcagcagtgacacaccct
gtgctgacgtacatgaaagcacctttccatattctagttcatcgtagagg
tcacagttagttcagtgtcctctccagtctccacaagctgagaatcacac
ttggatcctaagaagcttgtaaaacaaaacagctccagccattcactgca
tcttatactcaagagcctgacccgcaaaggttaaactcccacaccaaaag
ccacacagtaaaaagaaacaactgtgtgtagacacatttccaaacaccag
tgaactttaaaagatattattgctatgtttcacccagccttctcgatgtg
caatcccaaggctataaatatacagggaggcttatgggtagaacaaaggc
tcccatcctaaaataaaaatcacttatgtttacagcagcatttttatagg
agacaaaagatggggtcaaccccagtatccatcagttgatgaaagtcaca
gaacatgaagaacacacacatataagggatactaggtacacataaaaggg
tgaaatcaacttatttgtagcaacatgaagaacatgatggtaaaataata
taaagcgggtgggtggggtggg
cttagtctttaattcaccccagcattcattgagtccactccataccaagc
gtggcccaggagtgaacatagtgtgggaaaggctgacatgtcatctgtcc
tgatggttgccagtgcactctgccagaagatggagtgttatacggattct
acaagaaagtttgcttgggccactcaacaccgtagaaaatctgtgatgct
ggctgccgtgacgttcagcattaggagcagggcacaaatgaaccacagct
ttagaaaacatgttttcatcccataagccatcctactcctcctagtgtgg
agattttattagtcaggatttcctgggggaagagaccaataggaagtact
gaaagatttattgtgaagagttgggtcacgtgattgtagaagctgctaag
actccagttctgagtccgtcagctggaagcccaagagggatggtgggtaa
actccagtctgaaaactggcaggcttaagaccaagggagaacccatgctt
tggttttgattaaaagacagaaaaatcctgagtcctatctgggaggtctt
taggcgggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_66714485_66715406
seq2: B6Ng01-041M19.b_46_967

seq1  GAATTCTCCAAAAAGATCATCATGAAGGAATGACTCACCAGCTTATCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAAAAAGATCATCATGAAGGAATGACTCACCAGCTTATCCAG  50

seq1  GAATGTCACCATCTCCTTAAAAAAGAGCACACAGACACAGCATCAGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCACCATCTCCTTAAAAAAGAGCACACAGACACAGCATCAGACAG  100

seq1  GTAAGGTGGAGAGAAGCTTAGCTGCCTGCCATACCACACACTGTCAGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTGGAGAGAAGCTTAGCTGCCTGCCATACCACACACTGTCAGCAC  150

seq1  AAGCCCCAGGGGAACTCATGCCATGGAGACCCCTATTCCTTCCTGGACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCAGGGGAACTCATGCCATGGAGACCCCTATTCCTTCCTGGACCA  200

seq1  CAGTGGTCCTCCCTCTGTCTCCTGAGACCTCTTGCAGTCTCTGATGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTCCTCCCTCTGTCTCCTGAGACCTCTTGCAGTCTCTGATGGGTT  250

seq1  CCGTCCTGAGGAAGCACACACAAACACCTTCACTTCATATTCTGCCATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCCTGAGGAAGCACACACAAACACCTTCACTTCATATTCTGCCATAG  300

seq1  CTTCTAGGATCTCAACAGACCCCAAGAAATCTTCAGCAGTGACACACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGGATCTCAACAGACCCCAAGAAATCTTCAGCAGTGACACACCCT  350

seq1  GTGCTGACGTACATGAAAGCACCTTTCCATATTCTAGTTCATCGTAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGACGTACATGAAAGCACCTTTCCATATTCTAGTTCATCGTAGAGG  400

seq1  TCACAGTTAGTTCAGTGTCCTCTCCAGTCTCCACAAGCTGAGAATCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTTAGTTCAGTGTCCTCTCCAGTCTCCACAAGCTGAGAATCACAC  450

seq1  TTGGATCCTAAGAAGCTTGTAAAACAAAACAGCTCCAGCCATTCACTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATCCTAAGAAGCTTGTAAAACAAAACAGCTCCAGCCATTCACTGCA  500

seq1  TCTTATACTCAAGAGCCTGACCCGCAAAGGTTAAACTCCCACACCAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATACTCAAGAGCCTGACCCGCAAAGGTTAAACTCCCACACCAAAAG  550

seq1  CCACACAGTAAAAAGAAACAACTGTGTGTAGACACATTTCCAAACACCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGTAAAAAGAAACAACTGTGTGTAGACACATTTCCAAACACCAG  600

seq1  TGAACTTTAAAAGATATTATTGCTATGTTTCACCCAGCCTTCTCGATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTTAAAAGATATTATTGCTATGTTTCACCCAGCCTTCTCGATGTG  650

seq1  CAATCCCAAGGCTATAAATATACAGGGAGGCTTATGGGTAGAACAAAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCCAAGGCTATAAATATACAGGGAGGCTTATGGGTAGAACAAAGGC  700

seq1  TCCCATCCTAAAATAAAAATCACTTATGTTTACAGCAGCATTTTTATAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCCTAAAATAAAAATCACTTATGTTTACAGCAGCATTTTTATAGG  750

seq1  AGACAAAAGATGGGGTCAACCCCAGTATCCATCAGTTGATGAAAGTCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAGATGGGGTCAACCCCAGTATCCATCAGTTGATGAAAGTCACA  800

seq1  GAACATGAAGAACACACACATATAAGGGATACTAGGTACACATAAAAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGAAGAACACACACATATAAGGGATACTAGGTACACATAAAAGGG  850

seq1  TGAAATCAACTTATTTGTAGCAACATGAAGAACATGATGGTAAAATAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCAACTTATTTGTAGCAACATGAAGAACATGATGGTAAAATAATA  900

seq1  TAAGCGGGGTGGGTGGGGTGGG  922
      |||   ||||||||||||||||
seq2  TAAAGCGGGTGGGTGGGGTGGG  922

seq1: chr14_66856119_66856687
seq2: B6Ng01-041M19.g_69_637 (reverse)

seq1  CCCCCCCCGCCTAAAGACCTCCCAGATAGGACTCAGGATTTTTCTGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCGCCTAAAGACCTCCCAGATAGGACTCAGGATTTTTCTGTCTT  50

seq1  TTAATCAAAACCAAAGCATGGGTTCTCCCTTGGTCTTAAGCCTGCCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAAAACCAAAGCATGGGTTCTCCCTTGGTCTTAAGCCTGCCAGTT  100

seq1  TTCAGACTGGAGTTTACCCACCATCCCTCTTGGGCTTCCAGCTGACGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACTGGAGTTTACCCACCATCCCTCTTGGGCTTCCAGCTGACGGAC  150

seq1  TCAGAACTGGAGTCTTAGCAGCTTCTACAATCACGTGACCCAACTCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACTGGAGTCTTAGCAGCTTCTACAATCACGTGACCCAACTCTTCA  200

seq1  CAATAAATCTTTCAGTACTTCCTATTGGTCTCTTCCCCCAGGAAATCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATCTTTCAGTACTTCCTATTGGTCTCTTCCCCCAGGAAATCCTG  250

seq1  ACTAATAAAATCTCCACACTAGGAGGAGTAGGATGGCTTATGGGATGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAAAATCTCCACACTAGGAGGAGTAGGATGGCTTATGGGATGAAA  300

seq1  ACATGTTTTCTAAAGCTGTGGTTCATTTGTGCCCTGCTCCTAATGCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTTCTAAAGCTGTGGTTCATTTGTGCCCTGCTCCTAATGCTGAA  350

seq1  CGTCACGGCAGCCAGCATCACAGATTTTCTACGGTGTTGAGTGGCCCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACGGCAGCCAGCATCACAGATTTTCTACGGTGTTGAGTGGCCCAAG  400

seq1  CAAACTTTCTTGTAGAATCCGTATAACACTCCATCTTCTGGCAGAGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTCTTGTAGAATCCGTATAACACTCCATCTTCTGGCAGAGTGCA  450

seq1  CTGGCAACCATCAGGACAGATGACATGTCAGCCTTTCCCACACTATGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAACCATCAGGACAGATGACATGTCAGCCTTTCCCACACTATGTTC  500

seq1  ACTCCTGGGCCACGCTTGGTATGGAGTGGACTCAATGAATGCTGGGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGGGCCACGCTTGGTATGGAGTGGACTCAATGAATGCTGGGGTGA  550

seq1  ATTAAAGACTAAGGAATTC  569
      |||||||||||||||||||
seq2  ATTAAAGACTAAGGAATTC  569