BAC Information

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BAC

Clone NameB6Ng01-042P17
Chromosome14 (Build37)
Map Location 95,485,151 - 95,486,263
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043356, LOC100043783
Downstream geneLOC677613, LOC100043784, LOC382931, 4921530L21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042P17.bB6Ng01-042P17.g
ACCDH869184DH869185
length1,1011,152
definitionDH869184|Mus musculus domesticus DNA, BAC clone: B6Ng01-042P17, 5' end.DH869185|Mus musculus domesticus DNA, BAC clone: B6Ng01-042P17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgccagatcacctattctagttggatccacctcttaccccagtt
ggccagcctgggacatcccaattaaaaaaaaaaaaaaaaaagggatacag
aactaaacagagaattcaccagagaagaatcttgaatggctgagacgtac
ttaaagaaatgttcaaagttcttactgatcagagaaatgcacattaaaac
gaccctgattggaaaccttgcaccaatacgaagggctaagatcaaaacct
caggtaacaacacatgtggatgaatatgtggagaaaaaggaacactcctc
cattgctggtgggattgcaacctggaacaaccactctggatatcaatctg
gaacttcctcagaaaactggaaatagatcaacctgaagatgcagctatac
tactcttggggatataccagaaagatggaccaagataccacaggggtact
tgttccactatgttcacagcagccttatttgttgtagtcagaagctggaa
acaacccagatgtccacaacagaagaacggatcagaaaatgtgattcatt
tacacaatggaataatactcagctattacactattcttagtagtacatat
gacatagaggaagacagatatttagagtcttctgtgttatattaaagtta
aaatgaaataatcagttttatttcatttttcatgtcatcttaactgggaa
catatatttattttatttaaattgctgagtgtatcatatatttatatggt
atacttttaatactaaggaataattgtcaaacacttaaattttaaaagaa
ttatgaagtcaaatttctcacagttagaaaagtagctgaaaatatggtaa
gaaaaaaattaaatgactatttaattttatcctgaatgaattgtaataat
ccagaagttccaaatagttgttttcctctatatcatatataccacaaagt
cgtttgataaatacatcatatttctcattataagtatcacttttctcttt
ctcaaatattaaactgtgcttctttaaactgggtgtgatatctgtgaact
acgatttgtgagaaagaaataattgttttgtttacccaaaatgtttgtta
c
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctaaat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaatttctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggaatttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagatttaatgaaag
gacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggaggagctagagaagtagccaggagctaaagggatctgcaaccctata
gtggaacaacatatgagctacagtaccccggagctcttgactcttagctg
catatatatcaagatgctagtcgcatcactgaaggaaggtcatgactgca
cttttatgccagtacaggaatacagcaaatggggagtgtggtgtcaggaa
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_95485151_95486263
seq2: B6Ng01-042P17.b_47_1147 (reverse)

seq1  GTAACAAACACTTTTTTGGGTAATACAAACAATATATTTCTTTTCTCACA  50
      ||||||||||   ||||||||||   ||||||| |||||| |||||||||
seq2  GTAACAAACA---TTTTGGGTAAACAAAACAAT-TATTTC-TTTCTCACA  45

seq1  AATTCTTTAGTGTCACAGATATCACACCCAGTTTAAAGAAGCACAGTTTA  100
      |||    |||| ||||||||||||||||||||||||||||||||||||||
seq2  AAT--CGTAGT-TCACAGATATCACACCCAGTTTAAAGAAGCACAGTTTA  92

seq1  ATATTTTGAGAAAGAGAAAAGTGATACTTATTAATGGAGAAATATGATGT  150
      ||| |||||||||||||||||||||||||| |||| ||||||||||||||
seq2  ATA-TTTGAGAAAGAGAAAAGTGATACTTA-TAAT-GAGAAATATGATGT  139

seq1  ATTTATCAAACGACTTTGTGGTATATATGATATAGAGGAAAACAACTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAAACGACTTTGTGGTATATATGATATAGAGGAAAACAACTATT  189

seq1  TGGAACCTTCTGGATTATTACAATTCATTCAGGATAAAATTAAATAGTCA  250
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAA-CTTCTGGATTATTACAATTCATTCAGGATAAAATTAAATAGTCA  238

seq1  TTTAATTTTTTTCTTACCATATTTTCAGCTACTTTTCTAACTGTGAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTTTTCTTACCATATTTTCAGCTACTTTTCTAACTGTGAGAAA  288

seq1  TTTGACTTCATAATTCTTTTAAAATTTAAGTGTTTGACAATTATTCCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTTCATAATTCTTTTAAAATTTAAGTGTTTGACAATTATTCCTTA  338

seq1  GTATTAAAAGTATACCATATAAATATATGATACACTCAGCAATTTAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAAAAGTATACCATATAAATATATGATACACTCAGCAATTTAAATA  388

seq1  AAATAAATATATGTTCCCAGTTAAGATGACATGAAAAATGAAATAAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATATATGTTCCCAGTTAAGATGACATGAAAAATGAAATAAAACT  438

seq1  GATTATTTCATTTTAACTTTAATATAACACAGAAGACTCTAAATATCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTTCATTTTAACTTTAATATAACACAGAAGACTCTAAATATCTGT  488

seq1  CTTCCTCTATGTCATATGTACTACTAAGAATAGTGTAATAGCTGAGTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTATGTCATATGTACTACTAAGAATAGTGTAATAGCTGAGTATT  538

seq1  ATTCCATTGTGTAAATGAATCACATTTTCTGATCCGTTCTTCTGTTGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTGTGTAAATGAATCACATTTTCTGATCCGTTCTTCTGTTGTGG  588

seq1  ACATCTGGGTTGTTTCCAGCTTCTGACTACAACAAATAAGGCTGCTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGGGTTGTTTCCAGCTTCTGACTACAACAAATAAGGCTGCTGTGA  638

seq1  ACATAGTGGAACAAGTACCCCTGTGGTATCTTGGTCCATCTTTCTGGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTGGAACAAGTACCCCTGTGGTATCTTGGTCCATCTTTCTGGTAT  688

seq1  ATCCCCAAGAGTAGTATAGCTGCATCTTCAGGTTGATCTATTTCCAGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAAGAGTAGTATAGCTGCATCTTCAGGTTGATCTATTTCCAGTTT  738

seq1  TCTGAGGAAGTTCCAGATTGATATCCAGAGTGGTTGTTCCAGGTTGCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGAAGTTCCAGATTGATATCCAGAGTGGTTGTTCCAGGTTGCAAT  788

seq1  CCCACCAGCAATGGAGGAGTGTTCCTTTTTCTCCACATATTCATCCACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAGCAATGGAGGAGTGTTCCTTTTTCTCCACATATTCATCCACAT  838

seq1  GTGTTGTTACCTGAGGTTTTGATCTTAGCCCTTCGTATTGGTGCAAGGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTTACCTGAGGTTTTGATCTTAGCCCTTCGTATTGGTGCAAGGTT  888

seq1  TCCAATCAGGGTCGTTTTAATGTGCATTTCTCTGATCAGTAAGAACTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATCAGGGTCGTTTTAATGTGCATTTCTCTGATCAGTAAGAACTTTG  938

seq1  AACATTTCTTTAAGTACGTCTCAGCCATTCAAGATTCTTCTCTGGTGAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTCTTTAAGTACGTCTCAGCCATTCAAGATTCTTCTCTGGTGAAT  988

seq1  TCTCTGTTTAGTTCTGTATCCCTTTTTTTTTTTTTTTTTTAATTGGGATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTTAGTTCTGTATCCCTTTTTTTTTTTTTTTTTTAATTGGGATG  1038

seq1  TCCCAGGCTGGCCAACTGGGGTAAGAGGTGGATCCAACTAGAATAGGTGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCTGGCCAACTGGGGTAAGAGGTGGATCCAACTAGAATAGGTGA  1088

seq1  TCTGGCAGAATTC  1113
      |||||||||||||
seq2  TCTGGCAGAATTC  1101