BAC Information

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BAC

Clone NameB6Ng01-043B02
Chromosome14 (Build37)
Map Location 101,091,461 - 101,194,263
singlet/doubletdoublet
Overlap genenone
Upstream geneEG546623, Klf12, LOC100043413, EG668683, EG668684
Downstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043B02.bB6Ng01-043B02.g
ACCDH869246DH869247
length9061,163
definitionDH869246|Mus musculus domesticus DNA, BAC clone: B6Ng01-043B02, 5' end.DH869247|Mus musculus domesticus DNA, BAC clone: B6Ng01-043B02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,193,358 - 101,194,263)(101,091,461 - 101,092,636)
sequence
gaattcatagtgacttggtggtcagggagaaggagtctagacattgcata
gggagtgaaaacatggctcctgcctggagagagagagaggggtactcact
gtatttgaaatgtgtaagaatcagaagggagctctagctctgcccattcc
tgaggcattagcttcagtctgtagctccaaatgtgcaaataggagtcaaa
tatatactgggtcaagtttggacattactgaagggtgtctttccctcccc
tgcacacaagatattgagagaaacagaacaatagagctggtttccactaa
tccctattctgtgaaagtcttctcttttgcctcatctcaggcaaaattac
cagcagcccagctcggcacagcagagtatcctaatcctctgcaccatgaa
tttagtaaaaattcacttagttccaatgatggcagagcccatgattacca
ctgtcctgttagtagttagaatattaaacaacaacaacaacaaagaaaag
atgtagtttaattatgaagatggagacacatatttcatgactgagataag
tatgaatggcagtttttaaaatcttttgccatattatctatattttaaaa
tgggtttaattcctcaaattaaaaaaatggcaataacaatatgcaaccca
atgttgtgtaggaaacacttcgcaacattctctatacatgagtattgaga
gattgacaagtcaaaatctcacccccaagacaatgagttctaatgaacag
atagttatgggtgggggatgctaaggataccaggattccatgaaagtgct
gtgggagagaatagtggtcatgtcttttttagagacaaagattaagaggg
agatccaaggagctgttatgtaagccagcttctaaatggtcgggggtggg
ggtgga
gaattcctctggttcactatcagcaatgatatccatactggagagatgtc
ttcatccaggttttattgggaattgtcaatcaaggtcagtatctaaaatg
agcagagtctaagaaaataaaaatgttgttcagtgaaaaccctataagac
actacacagagacattgctgctctttagatcagacatggtgatagaacta
gcatcatagctaaaagagagcatgatggaattatagaccttgcttaacca
cacgggctaacagtcatggaaaactctatgtcacattaatgcaatactgg
cctgatatgggaacataacattgctggtatcatttaaattttgggaagtt
cttctagagtttgcaagggtttcttctccaagcaataagtctgagaattc
atgaaattttgttttgaatgcagcttgtgattgacaaggttatattatcg
tttgccttgccagtggaaggattttatctctatattctgttataactgta
caacaaaccttgttgagttgtagcacatggatacttgtaactgctcacat
tcccatgtagttttgacaaacttggggaagatagttattttcactacacc
acacaggcaatctgacaagtaggtgtcaatgtccttctaggatattattc
aacaccatggcacgaagtctttcctgtcacctctctttatctccatgagt
attaattcattgcatttaccattatagttacaagatacctcattagtcct
ttcatctgttctttttaagtttctcctactgaagttgtaacttcccttag
tgttgcgcgcgcccaactggccaggaagaacgacgctgctacaggatcct
tctgcacacgtttattcagtcctgtttcttctttctctatatatctccct
tgtttatatctcccttgtttatatctcccttgttttatatctcccttgtt
ttatatctcccttgtttttatatctcccttgttatatctccccactaata
gtattctctctcgaaaataatcctccctctagctggggcctctcactctt
ttatattctcatccacgccagcagcatgccaccttcaccaggctcgcatc
ttcagcctatcaggcagcagggcaaattctcatcaaattggattcacgtt
ctggtaccctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101193358_101194263
seq2: B6Ng01-043B02.b_41_946 (reverse)

seq1  TCCACCCCCACCCCCGACCATTTAGAAGCTGGCTTACATAGCAGCTCCTT  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCACCCCCACCCCCGACCATTTAGAAGCTGGCTTACATAACAGCTCCTT  50

seq1  GGATCTCCCTCTTAATCTTTGTTCTCT-AAAAAGACATGACCACTATTCT  99
      ||||||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  GGATCTCCCTCTTAATCTTTG-TCTCTAAAAAAGACATGACCACTATTCT  99

seq1  CTCCCACAGCACTTTCATGGAATCCTGGTATCCTTAGCATCCCCCACCCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACAGCACTTTCATGGAATCCTGGTATCCTTAGCATCCCCCACCCA  149

seq1  TAACTATCTGTTCATTAGAACTCATTGTCTTGGGGGTGAGATTTTGACTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATCTGTTCATTAGAACTCATTGTCTTGGGGGTGAGATTTTGACTT  199

seq1  GTCAATCTCTCAATACTCATGTATAGAGAATGTTGCGAAGTGTTTCCTAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATCTCTCAATACTCATGTATAGAGAATGTTGCGAAGTGTTTCCTAC  249

seq1  ACAACATTGGGTTGCATATTGTTATTGCCATTTTTTTAATTTGAGGAATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATTGGGTTGCATATTGTTATTGCCATTTTTTTAATTTGAGGAATT  299

seq1  AAACCCATTTTAAAATATAGATAATATGGCAAAAGATTTTAAAAACTGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCATTTTAAAATATAGATAATATGGCAAAAGATTTTAAAAACTGCC  349

seq1  ATTCATACTTATCTCAGTCATGAAATATGTGTCTCCATCTTCATAATTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATACTTATCTCAGTCATGAAATATGTGTCTCCATCTTCATAATTAA  399

seq1  ACTACATCTTTTCTTTGTTGTTGTTGTTGTTTAATATTCTAACTACTAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATCTTTTCTTTGTTGTTGTTGTTGTTTAATATTCTAACTACTAAC  449

seq1  AGGACAGTGGTAATCATGGGCTCTGCCATCATTGGAACTAAGTGAATTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTGGTAATCATGGGCTCTGCCATCATTGGAACTAAGTGAATTTT  499

seq1  TACTAAATTCATGGTGCAGAGGATTAGGATACTCTGCTGTGCCGAGCTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAATTCATGGTGCAGAGGATTAGGATACTCTGCTGTGCCGAGCTGG  549

seq1  GCTGCTGGTAATTTTGCCTGAGATGAGGCAAAAGAGAAGACTTTCACAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGGTAATTTTGCCTGAGATGAGGCAAAAGAGAAGACTTTCACAGA  599

seq1  ATAGGGATTAGTGGAAACCAGCTCTATTGTTCTGTTTCTCTCAATATCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGATTAGTGGAAACCAGCTCTATTGTTCTGTTTCTCTCAATATCTT  649

seq1  GTGTGCAGGGGAGGGAAAGACACCCTTCAGTAATGTCCAAACTTGACCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAGGGGAGGGAAAGACACCCTTCAGTAATGTCCAAACTTGACCCA  699

seq1  GTATATATTTGACTCCTATTTGCACATTTGGAGCTACAGACTGAAGCTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATTTGACTCCTATTTGCACATTTGGAGCTACAGACTGAAGCTAA  749

seq1  TGCCTCAGGAATGGGCAGAGCTAGAGCTCCCTTCTGATTCTTACACATTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAGGAATGGGCAGAGCTAGAGCTCCCTTCTGATTCTTACACATTT  799

seq1  CAAATACAGTGAGTACCCCTCTCTCTCTCTCCAGGCAGGAGCCATGTTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACAGTGAGTACCCCTCTCTCTCTCTCCAGGCAGGAGCCATGTTTT  849

seq1  CACTCCCTATGCAATGTCTAGACTCCTTCTCCCTGACCACCAAGTCACTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTATGCAATGTCTAGACTCCTTCTCCCTGACCACCAAGTCACTA  899

seq1  TGAATTC  906
      |||||||
seq2  TGAATTC  906

seq1: chr14_101091461_101092636
seq2: B6Ng01-043B02.g_68_1230

seq1  GAATTCCTCTGGTTCACTATCAGCAATGATATCCATACTGGAGAGATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGGTTCACTATCAGCAATGATATCCATACTGGAGAGATGTC  50

seq1  TTCATCCAGGTTTTATTGGGAATTGTCAATCAAGGTCAGTATCTAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCAGGTTTTATTGGGAATTGTCAATCAAGGTCAGTATCTAAAATG  100

seq1  AGCAGAGTCTAAGAAAATAAAAATGTTGTTCAGTGAAAACCCTATAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGTCTAAGAAAATAAAAATGTTGTTCAGTGAAAACCCTATAAGAC  150

seq1  ACTACACAGAGACATTGCTGCTCTTTAGATCAGACATGGTGATAGAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACAGAGACATTGCTGCTCTTTAGATCAGACATGGTGATAGAACTA  200

seq1  GCATCATAGCTAAAAGAGAGCATGATGGAATTATAGACCTTGCTTAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATAGCTAAAAGAGAGCATGATGGAATTATAGACCTTGCTTAACCA  250

seq1  CACGGGCTAACAGTCATGGAAAACTCTATGTCACATTAATGCAATACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGGCTAACAGTCATGGAAAACTCTATGTCACATTAATGCAATACTGG  300

seq1  CCTGATATGGGAACATAACATTGCTGGTATCATTTAAATTTTGGGAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATATGGGAACATAACATTGCTGGTATCATTTAAATTTTGGGAAGTT  350

seq1  CTTCTAGAGTTTGCAAGGGTTTCTTCTCCAAGCAATAAGTCTGAGAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGAGTTTGCAAGGGTTTCTTCTCCAAGCAATAAGTCTGAGAATTC  400

seq1  ATGAAATTTTGTTTTGAATGCAGCTTGTGATTGACAAGGTTATATTATCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTTTGTTTTGAATGCAGCTTGTGATTGACAAGGTTATATTATCG  450

seq1  TTTGCCTTGCCAGTGGAAGGATTTTATCTCTATATTCTGTTATAACTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTGCCAGTGGAAGGATTTTATCTCTATATTCTGTTATAACTGTA  500

seq1  CAACAAACCTTGTTGAGTTGTAGCACATGGATACTTGTAACTGCTCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAACCTTGTTGAGTTGTAGCACATGGATACTTGTAACTGCTCACAT  550

seq1  TCCCATGTAGTTTTGACAAACTTGGGGAAGATAGTTATTTTCACTACACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGTAGTTTTGACAAACTTGGGGAAGATAGTTATTTTCACTACACC  600

seq1  ACACAGGCAATCTGACAAGTAGGTGTCAATGTCCTTCTAGGATATTATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGCAATCTGACAAGTAGGTGTCAATGTCCTTCTAGGATATTATTC  650

seq1  AACACCATGGCACGAAGTCTTTCCTGTCACCTCTCTTTATCTCCATGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCATGGCACGAAGTCTTTCCTGTCACCTCTCTTTATCTCCATGAGT  700

seq1  ATTAATTCATTGCATTTACCATTATAGTTACAAGATACCTCATTAGTCC-  749
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTAATTCATTGCATTTACCATTATAGTTACAAGATACCTCATTAGTCCT  750

seq1  TTCATCTGTTCTTTTTAAGTTTCTCCTACTGAAGTTGTAACTTCCCTTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTGTTCTTTTTAAGTTTCTCCTACTGAAGTTGTAACTTCCCTTAG  800

seq1  TGTTGCGCGCGCCCAACTGGCCAGGAAGAACGACGCTGCTACAGGATCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCGCGCGCCCAACTGGCCAGGAAGAACGACGCTGCTACAGGATCCT  850

seq1  TCTGCACACGTTTATTCAGTCCTGTTTCTTCTTTCTCTATATATCTCCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACACGTTTATTCAGTCCTGTTTCTTCTTTCTCTATATATCTCCCT  900

seq1  TGTTTATATCTCCCTTGTTTATATCTCCCTTGTTTTTATATCTCCCTTGT  949
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  TGTTTATATCTCCCTTGTTTATATCTCCCTTG-TTTTATATCTCCCTTG-  948

seq1  TTTTATATCTCCCTTGTTTTTATATCTCCCTTGTTTATATCTCCCCACTA  999
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTTATATCTCCCTTGTTTTTATATCTCCCTTG-TTATATCTCCCCACTA  997

seq1  ATAGTAATCCTCTCTCGAATAATAATCCTCCCTCTAGCCTGGGCCTCTCA  1049
      ||||| || |||||||||| ||||||||||||||||||  ||||||||||
seq2  ATAGT-ATTCTCTCTCGAA-AATAATCCTCCCTCTAGCTGGGGCCTCTCA  1045

seq1  CTCTTTTATACTCTCATCCACGCACAGCAGGCCATGCCACC-TCACCAGG  1098
      |||||||||| |||||||||||| ||||||  ||||||||| ||||||||
seq2  CTCTTTTATATTCTCATCCACGC-CAGCAG--CATGCCACCTTCACCAGG  1092

seq1  CACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCAAATCTCCATCAAATTG  1148
      | |||| |||||||  |||| ||||||| ||||||||   ||||||||||
seq2  CTCGCATCTTCAGCCTATCA-GGCAGCA-GGGCAAATTCTCATCAAATTG  1140

seq1  GATTCACCGGTATCCTGGTACACCTGTG  1176
      |||||||     | ||||||| ||||||
seq2  GATTCAC----GTTCTGGTAC-CCTGTG  1163