BAC Information

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BAC

Clone NameB6Ng01-043E16
Chromosome14 (Build37)
Map Location 77,041,903 - 77,175,625
singlet/doubletdoublet
Overlap genenone
Upstream gene4930564B18Rik, Cog3, Slc25a30, LOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik, Tsc22d1, 2810032E02Rik
Downstream geneLOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043E16.bB6Ng01-043E16.g
ACCDH869400DH869401
length1,130963
definitionDH869400|Mus musculus domesticus DNA, BAC clone: B6Ng01-043E16, 5' end.DH869401|Mus musculus domesticus DNA, BAC clone: B6Ng01-043E16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,041,903 - 77,043,038)(77,174,686 - 77,175,625)
sequence
gaattctcccacccataatggactaggccctccccgtcaatcacgaatta
agaaaatgtcctataggtttgtctgaatacagcctgatcttatagaagca
ttttaattaattgaggttcctccttccaggtgactttaacttgccaagtt
gacataaaaccagtcagggcaactgggcttggggttacatcatcctggac
tctctccatccttacatggcctctttcccacatgccacacataccaaaca
tcaaaggaagtttctctttctgtgtcacctgtcacactttcacaacagtt
atccattcatggtttacacctctgaacagcatgaattttgtcaccaggca
tcggttggacatccttcaagagtggtgagattcgctctactggagcaggc
caaggggcatttcaggtagtgagaacataggaaaccaatgcattttccca
aagagcagaggaaatgtaatacaccttcccccacaccctctatttttcat
ctttcttgtacaaacaagtcctggagttcacaaactacccacttgggtca
tgttgtccttggccaatgtgtagcaagttatcttggctgtatctgtagac
aagaaacttgcctggaaggggtggtggcaggcatcttcccgtggtcaagg
gtcttttgggtgaattatccgaggactgtgaaccttgcctagctctgact
cctgagggcagtgtgaggaggaacccatgcttgattaacaggagtgccaa
tccagaaaactgaactagaaaaccaccctgctctcctttcaacaagctgg
agtaaagggcttaggtctggctttgcctggtatagctggatgtggcccag
agctgtggcttgctgttttagcatttcttctctcctaactctcccttcat
ggttctctcttcacccttctactctaaaccccagtgcactctataccagt
aaataccaatgcacagagtagtttctcctgggtattttcttccagtcttc
taatatttggatgtggtaatgaaggcttaatcaccttttccatcatatag
acattggaccgggggagacagacaaagagtcttccagttgcatgttcgag
acaatcctttctgctcttttcctctgctgc
gaattctgtttgacctgagtgctttagactgctactcccttcagaggctc
catgaagctcccctctgtggaagagtgattgaatgatgggatgggaatgg
aatgtggtggtcatcttatctcaccacacagacagctcccaggaggtagc
agggctcactcctcatgacaacagtaaagacattctgagaaagtgataac
atccaattacctcacagtcacaagagtgcggggactgtgggaccttgtgt
ccctcagtcaacaggtgtcaccgaacaagaggaagggagagaaggctgct
catctactggaagagactaaggactttaagtgaaggtcaaaggtcaggga
tttctttcctacaaaggaggagagggatatacagggggaagctgtaaaca
actctccctgggtaccacgtaagaacacctgctaaggtagcatgcctcat
aacttctacatgtaatgaatagttctcacagtgacctgaggggaggaagt
tagctcttcaatgctccctctgccttctatttttttttcttctgcctttt
catgtagccttgagaactatggaatgtgcacagggagctgattgggggct
gagtttttgactaatcctatgtggcattgaaatgacaatagaaggtctgt
gagagcagtcctggggttctcatcccttactccactccttagagctcact
gcattcttttctgtcctccggagctggtggggggagcaaaagagaaacat
tagccaagttacactattactgggaggatagaacccaagtgctctgtcaa
cacctaagatgattgaccagaggaaagacagtctctgggatggagatata
tctggagcttgggctacagcatcttttgttggatagaagatgtgcatgct
gaaacagaaaaggcaagagctacaagtatgggccactgttttcttgaaat
gctcaaggcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77041903_77043038
seq2: B6Ng01-043E16.b_44_1173

seq1  GAATTCTCCCACCCATAATGGACTAGGCCCTCCCCGTCAATCACGAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCACCCATAATGGACTAGGCCCTCCCCGTCAATCACGAATTA  50

seq1  AGAAAATGTCCTATAGGTTTGTCTGAATACAGCCTGATCTTATAGAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGTCCTATAGGTTTGTCTGAATACAGCCTGATCTTATAGAAGCA  100

seq1  TTTTAATTAATTGAGGTTCCTCCTTCCAGGTGACTTTAACTTGCCAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTAATTGAGGTTCCTCCTTCCAGGTGACTTTAACTTGCCAAGTT  150

seq1  GACATAAAACCAGTCAGGGCAACTGGGCTTGGGGTTACATCATCCTGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAAACCAGTCAGGGCAACTGGGCTTGGGGTTACATCATCCTGGAC  200

seq1  TCTCTCCATCCTTACATGGCCTCTTTCCCACATGCCACACATACCAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCATCCTTACATGGCCTCTTTCCCACATGCCACACATACCAAACA  250

seq1  TCAAAGGAAGTTTCTCTTTCTGTGTCACCTGTCACACTTTCACAACAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGAAGTTTCTCTTTCTGTGTCACCTGTCACACTTTCACAACAGTT  300

seq1  ATCCATTCATGGTTTACACCTCTGAACAGCATGAATTTTGTCACCAGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTCATGGTTTACACCTCTGAACAGCATGAATTTTGTCACCAGGCA  350

seq1  TCGGTTGGACATCCTTCAAGAGTGGTGAGATTCGCTCTACTGGAGCAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTGGACATCCTTCAAGAGTGGTGAGATTCGCTCTACTGGAGCAGGC  400

seq1  CAAGGGGCATTTCAGGTAGTGAGAACATAGGAAACCAATGCATTTTCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGCATTTCAGGTAGTGAGAACATAGGAAACCAATGCATTTTCCCA  450

seq1  AAGAGCAGAGGAAATGTAATACACCTTCCCCCACACCCTCTATTTTTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGAGGAAATGTAATACACCTTCCCCCACACCCTCTATTTTTCAT  500

seq1  CTTTCTTGTACAAACAAGTCCTGGAGTTCACAAACTACCCACTTGGGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGTACAAACAAGTCCTGGAGTTCACAAACTACCCACTTGGGTCA  550

seq1  TGTTGTCCTTGGCCAATGTGTAGCAAGTTATCTTGGCTGTATCTGTAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCCTTGGCCAATGTGTAGCAAGTTATCTTGGCTGTATCTGTAGAC  600

seq1  AAGAAACTTGCCTGGAAGGGGTGGTGGCAGGCATCTTCCCGTGGTCAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTTGCCTGGAAGGGGTGGTGGCAGGCATCTTCCCGTGGTCAAGG  650

seq1  GTCTTTTGGGTGAATTATCCGAGGACTGTGAACCTTGCCTAGCTCTGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGGGTGAATTATCCGAGGACTGTGAACCTTGCCTAGCTCTGACT  700

seq1  CCTGAGGGCAGTGTGAGGAGGAACCCATGCTTGATTAACAGGAGTGCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGGCAGTGTGAGGAGGAACCCATGCTTGATTAACAGGAGTGCCAA  750

seq1  TCCAGAAAACTGAACTAGAAAACCACCCTGCTCTCCTTTCAACAAGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAAACTGAACTAGAAAACCACCCTGCTCTCCTTTCAACAAGCTGG  800

seq1  AGTAAAGGGCTTAGGTCTGGCTTTGCCTGGTATAGCTGGATGTGGCCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGGGCTTAGGTCTGGCTTTGCCTGGTATAGCTGGATGTGGCCCAG  850

seq1  AGCTGTGGCTTGCTGTTTTAGCATTTCTTCTCTCCTAACTCTCCCTTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGGCTTGCTGTTTTAGCATTTCTTCTCTCCTAACTCTCCCTTCAT  900

seq1  GGTTCTCTCTTCACCCTTCTACTCTAAACCCCAAGTGCACTCTATACCAG  950
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  GGTTCTCTCTTCACCCTTCTACTCTAAACCCC-AGTGCACTCTATACCA-  948

seq1  GTAAATACCAATGCACAGAGTAGTTTCTCCTGGGTATTTTTCTTCCAGTC  1000
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTAAATACCAATGCACAGAGTAGTTTCTCCTGGGTA-TTTTCTTCCAGTC  997

seq1  -TCTAATAATTTGGAATGTGGTATTGAAGGCTTAATCA-CTTTTCCATCA  1048
       |||||| |||||| |||||||| |||||||||||||| |||||||||| 
seq2  TTCTAAT-ATTTGG-ATGTGGTAATGAAGGCTTAATCACCTTTTCCATC-  1044

seq1  ATATAGGACATTGGACCGGGGAGGACAGACAAAGAGTCTTCCAGGTGGCA  1098
      ||||| |||||||||||||||  |||||||||||||||||||| || |||
seq2  ATATA-GACATTGGACCGGGGGAGACAGACAAAGAGTCTTCCA-GTTGCA  1092

seq1  TGTCCGAGACAATCCTTTCTGCTCTTTTCCTCTGCTGC  1136
      ||| ||||||||||||||||||||||||||||||||||
seq2  TGTTCGAGACAATCCTTTCTGCTCTTTTCCTCTGCTGC  1130

seq1: chr14_77174686_77175625
seq2: B6Ng01-043E16.g_68_1012 (reverse)

seq1  AAGAAAACAGTGGCCCTGACTTTGTGGCTTCTTGCCTTTTCTGTCTCAGC  50
      ||||||||||||||||  || |||| || ||||||||||||||| |||||
seq2  AAGAAAACAGTGGCCCATAC-TTGTAGC-TCTTGCCTTTTCTGTTTCAGC  48

seq1  ATGCTCCTCTTCTATCCAACAAATGATTGCTGTAGGCC-AGCTCCAGATA  99
      |||| | |||||||||||||||| || |||||||| || |||||||||||
seq2  ATGCACATCTTCTATCCAACAAAAGA-TGCTGTAGCCCAAGCTCCAGATA  97

seq1  TCTCTCCGTACCAGAGACTGTCTTTCCTCTGGTCACTCATCTTAGGTGTT  149
      | ||||| | ||||||||||||||||||||||||| ||||||||||||||
seq2  TATCTCCATCCCAGAGACTGTCTTTCCTCTGGTCAATCATCTTAGGTGTT  147

seq1  GACTGAGCACTTGGGTTCTATCCT-CCAGTATTAGTGTAACTTGGCTAAT  198
      ||| |||||||||||||||||||| |||||| ||||||||||||||||||
seq2  GACAGAGCACTTGGGTTCTATCCTCCCAGTAATAGTGTAACTTGGCTAAT  197

seq1  GTTTCTC-TTTGCT-CCCCCACCAGCTCCGGAGGACAGAAA--GATGCAG  244
      ||||||| |||||| ||||||||||||||||||||||||||   ||||||
seq2  GTTTCTCTTTTGCTCCCCCCACCAGCTCCGGAGGACAGAAAAGAATGCAG  247

seq1  TGAGCTCTAAGGAGTGGAGTAAGGGATGAGAA-CCCAGGACTGCTCTCAC  293
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGAGCTCTAAGGAGTGGAGTAAGGGATGAGAACCCCAGGACTGCTCTCAC  297

seq1  AGACCTTCTATTGTCATTTCAATGCCACATAGGATTAGTC-AAAACTCAG  342
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGACCTTCTATTGTCATTTCAATGCCACATAGGATTAGTCAAAAACTCAG  347

seq1  CCCCCACTCAGCTCCCTGTGCACATTCCATAGTTCTCAAGGCTACATGAA  392
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAATCAGCTCCCTGTGCACATTCCATAGTTCTCAAGGCTACATGAA  397

seq1  AAGGCAGAAGAAAAAAAAATAGAAGGCAGAGGGAGCATTGAAGAGCTAAC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGAAGAAAAAAAAATAGAAGGCAGAGGGAGCATTGAAGAGCTAAC  447

seq1  TTCCTCCCCTCAGGTCACTGTGAGAACTATTCATTACATGTAGAAGTTAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCCTCAGGTCACTGTGAGAACTATTCATTACATGTAGAAGTTAT  497

seq1  GAGGCATGCTACCTTAGCAGGTGTTCTTACGTGGTACCCAGGGAGAGTTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATGCTACCTTAGCAGGTGTTCTTACGTGGTACCCAGGGAGAGTTG  547

seq1  TTTACAGCTTCCCCCTGTATATCCCTCTCCTCCTTTGTAGGAAAGAAATC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGCTTCCCCCTGTATATCCCTCTCCTCCTTTGTAGGAAAGAAATC  597

seq1  CCTGACCTTTGACCTTCACTTAAAGTCCTTAGTCTCTTCCAGTAGATGAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCTTTGACCTTCACTTAAAGTCCTTAGTCTCTTCCAGTAGATGAG  647

seq1  CAGCCTTCTCTCCCTTCCTCTTGTTCGGTGACACCTGTTGACTGAGGGAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTCTCTCCCTTCCTCTTGTTCGGTGACACCTGTTGACTGAGGGAC  697

seq1  ACAAGGTCCCACAGTCCCCGCACTCTTGTGACTGTGAGGTAATTGGATGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTCCCACAGTCCCCGCACTCTTGTGACTGTGAGGTAATTGGATGT  747

seq1  TATCACTTTCTCAGAATGTCTTTACTGTTGTCATGAGGAGTGAGCCCTGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTTTCTCAGAATGTCTTTACTGTTGTCATGAGGAGTGAGCCCTGC  797

seq1  TACCTCCTGGGAGCTGTCTGTGTGGTGAGATAAGATGACCACCACATTCC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCTGGGAGCTGTCTGTGTGGTGAGATAAGATGACCACCACATTCC  847

seq1  ATTCCCATCCCATCATTCAATCACTCTTCCACAGAGGGGAGCTTCATGGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCATCCCATCATTCAATCACTCTTCCACAGAGGGGAGCTTCATGGA  897

seq1  GCCTCTGAAGGGAGTAGCAGTCTAAAGCACTCAGGTCAAACAGAATTC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGAAGGGAGTAGCAGTCTAAAGCACTCAGGTCAAACAGAATTC  945