BAC Information

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BAC

Clone NameB6Ng01-043K18
Chromosome14 (Build37)
Map Location 21,019,561 - 21,157,274
singlet/doubletdoublet
Overlap geneLOC100039106, Kcnk16, Nudt13, Ecd
Upstream geneLOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5
Downstream geneAA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043K18.bB6Ng01-043K18.g
ACCDH869665DH869666
length1,073784
definitionDH869665|Mus musculus domesticus DNA, BAC clone: B6Ng01-043K18, 5' end.DH869666|Mus musculus domesticus DNA, BAC clone: B6Ng01-043K18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,156,191 - 21,157,274)(21,019,561 - 21,020,297)
sequence
gaattccttcagcctaggtcaatgctcatctgcactttactgacgtcact
gttcatgaaactgacagttaaatttatggaatttaaaatcagaaaacagg
ttgactgatgggttgactggctgactgaatgagatagggtcttgttatgt
tgcccaggctagttttgaaccccctggtctcatgctaactctttcctcaa
cctcctgagcagctgtggctccaggagtgtcactgtccctgacttagatg
tagtttgcctttccatccaaaagtatcttttcttttatttaccttactta
ggtgtcaagcaaagtatagtctatgaaaatttgagattggggctggagac
atggcttcatggttaagcacactggctgctattcccaaagatctgagttc
aattcccatcacacgtatggccactcattactgtctgcaactccagtccc
atgaaatcccaacacgctcttctggcctcagtgggtactgggcatacaga
tacatatgggcaaaacattcatacgcataaaataataaattttaaaagat
aaaataaaaattgagatttttatagataaaaacctaaagaagacaataca
atacaatacgtttggctttttgttttattgttttttggttctggagtgtc
tatatgattctttgacctgtatggaaccctttaggcttcatttttaagag
aagagaagtcccaatagctctttggttccaagcattgtcttactaacact
acagatcttttaaagctagatgtgctagctcacacctttaatcctagcac
cgtggaataagaggcaggaggatctcagtgagttccaggccagcctggtc
tacaaaacaagttcctggctagccataagtacctagtaagaccctgaaaa
aaaatcttgatatttacataaagataatatatataaaaagaacatataca
taaagcattgctacttgtcgcaagtaccagaaagggtcgaagcatccctc
catcgagcacactgcttcttcagcggcattgtggcggtgctaagcaacag
ccaagctgctgtcggcagtcgtc
gaattctttttttttattacgtattttcctcaattacatttccaatgcta
tcccaaaagtcccccacaccctcccccccactcccctacccacccattcc
cattttttggccctggcattcccctgtactggggcatataaagtttgcct
gtccaatgggcctctctttccagtgatggccgactaggccatcttttgat
acatatgcagctagagtcaagagctccggggtactggttagttcataatg
ttgcaactacagggttgcagatctctttagctccttggatactttctcta
gctcctccattgggaacagtaagaattcttaacagctgagctgggcagtg
gtggcacacacctttaattccagcacttgggaggcagaggcaggtggatt
tctgagttcgaggccagcctgctctacagagtgagttccaggacagccag
atctatacagagaaaccctgtctcgaaaaacaaaaaacaaaacaaaacaa
aacaaaacaaaaatcttaacagctgagccacctcacctgttaaaggtttt
tcttatgtttttgtttttttagtgtgactagctcttagctcacctgggag
gaacaagcacagagagcaagaatctaaaaggacagactggggatggtggg
agggtggcaaagggtttcaggctctttggtagggattgtctttctttcag
ataatcccctttgctcttgtttcttctctagaaaaaccaaaagttatggt
cttttttcttcacagcttcctgaataggataaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_21156191_21157274
seq2: B6Ng01-043K18.b_46_1118 (reverse)

seq1  GACGGCTGCCGACAGCAGCCTGGGCTGTTGCTTGAGCACCGCCACAATGC  50
      |||| ||||||||||||| || ||||||||||| ||||||||||||||||
seq2  GACGACTGCCGACAGCAG-CTTGGCTGTTGCTT-AGCACCGCCACAATGC  48

seq1  CGGCTGGAAGGAAGCAGTGTGCTCGATGGAGGGATGCTTCGACCCTTTCT  100
      | ||||  | ||||||||||||||||||||||||||||||||||||||||
seq2  C-GCTG--AAGAAGCAGTGTGCTCGATGGAGGGATGCTTCGACCCTTTCT  95

seq1  GGGTACCTGCGACAAGTAGCAATTGCTTTTATGTTATATGTTCTTTTTAT  150
       ||||| ||||||||||||||| ||| |||||| ||||||||||||||||
seq2  -GGTACTTGCGACAAGTAGCAA-TGC-TTTATG-TATATGTTCTTTTTAT  141

seq1  ATATATTTATCTTTTATGTAAATATCAAGATTTTTTTTCAGGGTCTTACT  200
      ||||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATATA-TTATC-TTTATGTAAATATCAAGATTTTTTTTCAGGGTCTTACT  189

seq1  AGGTACTTATGGCTAGCCAGGAACTTGTTTTGTAGACCAGGCTGGCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTTATGGCTAGCCAGGAACTTGTTTTGTAGACCAGGCTGGCCTGG  239

seq1  AACTCACTGAGATCCTCCTGCCTCTTATTCCACGGTGCTAGGATTAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTGAGATCCTCCTGCCTCTTATTCCACGGTGCTAGGATTAAAGG  289

seq1  TGTGAGCTAGCACATCTAGCTTTAAAAGATCTGTAGTGTTAGTAAGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCTAGCACATCTAGCTTTAAAAGATCTGTAGTGTTAGTAAGACAA  339

seq1  TGCTTGGAACCAAAGAGCTATTGGGACTTCTCTTCTCTTAAAAATGAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGAACCAAAGAGCTATTGGGACTTCTCTTCTCTTAAAAATGAAGC  389

seq1  CTAAAGGGTTCCATACAGGTCAAAGAATCATATAGACACTCCAGAACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGGTTCCATACAGGTCAAAGAATCATATAGACACTCCAGAACCAA  439

seq1  AAAACAATAAAACAAAAAGCCAAACGTATTGTATTGTATTGTCTTCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAATAAAACAAAAAGCCAAACGTATTGTATTGTATTGTCTTCTTTA  489

seq1  GGTTTTTATCTATAAAAATCTCAATTTTTATTTTATCTTTTAAAATTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTATCTATAAAAATCTCAATTTTTATTTTATCTTTTAAAATTTAT  539

seq1  TATTTTATGCGTATGAATGTTTTGCCCATATGTATCTGTATGCCCAGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATGCGTATGAATGTTTTGCCCATATGTATCTGTATGCCCAGTAC  589

seq1  CCACTGAGGCCAGAAGAGCGTGTTGGGATTTCATGGGACTGGAGTTGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAGGCCAGAAGAGCGTGTTGGGATTTCATGGGACTGGAGTTGCAG  639

seq1  ACAGTAATGAGTGGCCATACGTGTGATGGGAATTGAACTCAGATCTTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAATGAGTGGCCATACGTGTGATGGGAATTGAACTCAGATCTTTGG  689

seq1  GAATAGCAGCCAGTGTGCTTAACCATGAAGCCATGTCTCCAGCCCCAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCAGCCAGTGTGCTTAACCATGAAGCCATGTCTCCAGCCCCAATC  739

seq1  TCAAATTTTCATAGACTATACTTTGCTTGACACCTAAGTAAGGTAAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTTCATAGACTATACTTTGCTTGACACCTAAGTAAGGTAAATAA  789

seq1  AAGAAAAGATACTTTTGGATGGAAAGGCAAACTACATCTAAGTCAGGGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGATACTTTTGGATGGAAAGGCAAACTACATCTAAGTCAGGGAC  839

seq1  AGTGACACTCCTGGAGCCACAGCTGCTCAGGAGGTTGAGGAAAGAGTTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACACTCCTGGAGCCACAGCTGCTCAGGAGGTTGAGGAAAGAGTTAG  889

seq1  CATGAGACCAGGGGGTTCAAAACTAGCCTGGGCAACATAACAAGACCCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGACCAGGGGGTTCAAAACTAGCCTGGGCAACATAACAAGACCCTA  939

seq1  TCTCATTCAGTCAGCCAGTCAACCCATCAGTCAACCTGTTTTCTGATTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCAGTCAGCCAGTCAACCCATCAGTCAACCTGTTTTCTGATTTT  989

seq1  AAATTCCATAAATTTAACTGTCAGTTTCATGAACAGTGACGTCAGTAAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCATAAATTTAACTGTCAGTTTCATGAACAGTGACGTCAGTAAAG  1039

seq1  TGCAGATGAGCATTGACCTAGGCTGAAGGAATTC  1084
      ||||||||||||||||||||||||||||||||||
seq2  TGCAGATGAGCATTGACCTAGGCTGAAGGAATTC  1073

seq1: chr14_21019561_21020297
seq2: B6Ng01-043K18.g_110_852

seq1  CCAATGCTATCCCAAAAGTCCCCCACACCCTCCCCCCCACTCCCCTACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCTATCCCAAAAGTCCCCCACACCCTCCCCCCCACTCCCCTACCC  50

seq1  ACCCATTCCCATTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCCCATTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAA  100

seq1  AGTTTGCCTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCCTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCA  150

seq1  TCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAG  200

seq1  TTCATAATGTTGCAACTACAGGGTTGCAGATCTCTTTAGCTCCTTGGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAATGTTGCAACTACAGGGTTGCAGATCTCTTTAGCTCCTTGGATA  250

seq1  CTTTCTCTAGCTCCTCCATTGGGAACAGTAAGAATTCTTAACAGCTGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTAGCTCCTCCATTGGGAACAGTAAGAATTCTTAACAGCTGAGC  300

seq1  TGGGCAGTGGTGGCACACACCTTTAATTCCAGCACTTGGGAGGCAGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGTGGTGGCACACACCTTTAATTCCAGCACTTGGGAGGCAGAGGC  350

seq1  AGGTGGATTTCTGAGTTCGAGGCCAGCCTGCTCTACAGAGTGAGTTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGATTTCTGAGTTCGAGGCCAGCCTGCTCTACAGAGTGAGTTCCAG  400

seq1  GACAGCCAGATCTATACAGAGAAACCCTGTCTCGAAAAACAAAAAACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCCAGATCTATACAGAGAAACCCTGTCTCGAAAAACAAAAAACAAA  450

seq1  ACAAAACAAAACAAAACAAAAATCTTAACAGCTGAGCCACCTCACCTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAACAAAAATCTTAACAGCTGAGCCACCTCACCTGTT  500

seq1  AAAGGTTTTTCTTATG-TTTTGTTTTTTTAGTGTGACTAGCTCTTAGCTC  549
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAAGGTTTTTCTTATGTTTTTGTTTTTTTAGTGTGACTAGCTCTTAGCTC  550

seq1  ACCTGGGAGGAACAAGCACAGAGAGCAAGAATCTAAAAGGACAGACTGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGAGGAACAAGCACAGAGAGCAAGAATCTAAAAGGACAGACTGGG  600

seq1  GATGGTGGGAGGGTGGCAAAGGG-TTCAGGCAC-TTGGTAGGGATTGTC-  646
      ||||||||||||||||||||||| ||||||| | ||||||||||||||| 
seq2  GATGGTGGGAGGGTGGCAAAGGGTTTCAGGCTCTTTGGTAGGGATTGTCT  650

seq1  TTCTTTCAAGAGAATCGCC-TTGC-CTTG-TTCTTCGTCTAGAAAAACCA  693
      ||||||| ||| |||| || |||| |||| |||||| |||||||||||||
seq2  TTCTTTC-AGATAATCCCCTTTGCTCTTGTTTCTTC-TCTAGAAAAACCA  698

seq1  AGATGTTAGGGTC-TTTTTCTTCACAGC-TCCTGGAGAGGATAAAA  737
      | | |||| |||| |||||||||||||| ||||| | |||||||||
seq2  A-AAGTTATGGTCTTTTTTCTTCACAGCTTCCTGAATAGGATAAAA  743