BAC Information

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BAC

Clone NameB6Ng01-046K19
Chromosome14 (Build37)
Map Location 98,438,651 - 98,505,717
singlet/doubletdoublet
Overlap geneDach1
Upstream geneEG668659
Downstream geneLOC635593, LOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046K19.bB6Ng01-046K19.g
ACCDH871766DH871767
length1,0421,039
definitionDH871766|Mus musculus domesticus DNA, BAC clone: B6Ng01-046K19, 5' end.DH871767|Mus musculus domesticus DNA, BAC clone: B6Ng01-046K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,504,643 - 98,505,717)(98,438,651 - 98,439,719)
sequence
gaattccaccagagaggtgccaatgggtgtgctggatgagtcttggtctc
tgctcttgccaacagggtggtgagagccagtatgtgctatctgtcttgag
tgtatagtctgatacaataatgtcattgccccatgtggcaaatggtgtat
gctattgtaaaactgtttgtctatgtgattaaggcattgctgcagtgtgc
agcaccagccaattacttttataatttaattatagcagaaaaaaagagaa
tagcataatagaaattcttgtcatagagaatatgtaaagtgtaaattgaa
gagccatgaacatttcatgcattggcagcctgatttgtttttattttcaa
cttgttataaagctgtgtttattcagtgtcataaaataagatatagtagc
atttagtaattacttagttctatatcaaaataattatatagagtatgcac
ttgtgatccctccactctgtttggatgtgaaaataaacactctgaggcct
gtatcagtttttttagttttagacagtgtaaataaagctgaatcttcaac
ttccaaattaaaactgataaccttgggcatcagaggtttttataaaggaa
gggggaaaacttagcttgcctcaaaacaggttgtgtctctggaatgcttc
tgggactaaagagatcaattaagtatgtataaacaaacagttggaaaaaa
gctactaaaacaacagaggagagagctctctattgggccccagaggcctg
ggggagcgaagtttcattaactggatctgaagtcctatggccttctataa
acaggcattaattaaagaatgtaaaaaataaagtttcagaccttgcaata
tgttatgatcatatgattcaggcccaggatgagaggagcagcagagtcat
aaaatagcatgagcatttatatgagtgctgcagattctgcaaatagtggt
tatttgctgtcaaagcaatagtgatttgctcactgctaatttttatgtgc
atgctgcaatgtttttcacaaatgatgagttattgttatggc
gaattctcttctaaggaattgccatctctattcaaattaagagatacttc
ataaaaagatatacattcatttaaaagattagttttatttttattaagta
gaatgaactgtattatgtatttaaaatattaaactgaagcaaaattaatt
tggaatctcatgagcaataaaattttggtttgaaaatgtttttatatgtc
aaatattacaaaatatgaagtcatcattgccctttaaaatcctttcagca
agaattccctaattgtactcccactttatctcactgtaccagtaagtaaa
taaattaacaaaatagcttttatcacacagaataaccttttaactgaggg
attatctgtggtttatttttcatttctctcactgctgatagcagttcatg
cctcattgattagtttgctgaggtggtgaccagaaatgaaaacacagtct
ctcagagagtttgcaaggaatacacacacacacacacacacacacacacc
actacacaaaacacacattcattctgtgcttctatgcctgctatttagtt
tccaaggagtaaagaattaaaaattatgtgtccatataagccaatgtaca
gctttgactgcatcttttagatttcttcctctttcacattttatgcttat
attatactgtgactattttaattaagttgtccattttatcattttctgag
gaatgaaaacgtcaaagagagaaacagtacttgacaactgagactctagt
agcaatattcatattgaaattttacagaaatcttatactcacatttaaaa
ggcaacatatggatttgtgcttagtagtcctatattgtatctaactaatt
ctctttctttcttcatccaaattaattctggagtacttcattcagagcac
tgttttacagtgtatacatgtatatactacacctagtactgtgctatctg
agctttgatgactgtgtgttctatgttaaagactgacccacttgcatgtt
tctcaaatagcattacagtttagacttcattctagagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_98504643_98505717
seq2: B6Ng01-046K19.b_41_1082 (reverse)

seq1  GCCATTAACAATAACCTTCATCCATTTGTGAAAAACATTTTGCCAGGCAT  50
      |||| ||||||||||  |||| |||||||||||||||  ||||   ||||
seq2  GCCA-TAACAATAAC--TCAT-CATTTGTGAAAAACA--TTGC--AGCAT  42

seq1  GCACATAAAAAATTAGCAAGTGAAGCAAAATCACCTTAATTTGCTTTGGA  100
      |||||| |||||||||| |||| ||| |||||||  ||  ||||||||  
seq2  GCACAT-AAAAATTAGC-AGTG-AGC-AAATCAC--TA--TTGCTTTG--  82

seq1  CCAGCAAATAACCAACTAATTTGCAGAAATCCCTGCCAAGCACTCATATT  150
       |||||||||||| ||| ||||||||||    ||||  |||||||||| |
seq2  ACAGCAAATAACC-ACT-ATTTGCAGAA---TCTGC--AGCACTCATA-T  124

seq1  AAATGCTTCATGCTTATTTTATGACCTCTGCTGCTCCTCTCCTTCCTGGG  200
      |||||| |||||| |||||||||| ||||||||||||||| | |||||||
seq2  AAATGC-TCATGC-TATTTTATGA-CTCTGCTGCTCCTCT-CATCCTGGG  170

seq1  CCCTGAATCATATGATCATTAACATATTGCAAGGTCTGAAACTTTTATTT  250
       ||||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  -CCTGAATCATATGATCA-TAACATATTGCAAGGTCTGAAAC-TTTATTT  217

seq1  TTTACATTCTTTAATTAATGCCTGTTTATAGAAGGCCATAGGACTTCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTCTTTAATTAATGCCTGTTTATAGAAGGCCATAGGACTTCAGA  267

seq1  TCCAGTTAATGAAACTTCGCTCCCCCAGGCCTCTGGGGCCCAATAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTAATGAAACTTCGCTCCCCCAGGCCTCTGGGGCCCAATAGAGAG  317

seq1  CTCTCTCCTCTGTTGTTTTAGTAGCTTTTTTCCAACTGTTTGTTTATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCTCTGTTGTTTTAGTAGCTTTTTTCCAACTGTTTGTTTATACA  367

seq1  TACTTAATTGATCTCTTTAGTCCCAGAAGCATTCCAGAGACACAACCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAATTGATCTCTTTAGTCCCAGAAGCATTCCAGAGACACAACCTGT  417

seq1  TTTGAGGCAAGCTAAGTTTTCCCCCTTCCTTTATAAAAACCTCTGATGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGCAAGCTAAGTTTTCCCCCTTCCTTTATAAAAACCTCTGATGCC  467

seq1  CAAGGTTATCAGTTTTAATTTGGAAGTTGAAGATTCAGCTTTATTTACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTATCAGTTTTAATTTGGAAGTTGAAGATTCAGCTTTATTTACAC  517

seq1  TGTCTAAAACTAAAAAAACTGATACAGGCCTCAGAGTGTTTATTTTCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAAACTAAAAAAACTGATACAGGCCTCAGAGTGTTTATTTTCACA  567

seq1  TCCAAACAGAGTGGAGGGATCACAAGTGCATACTCTATATAATTATTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACAGAGTGGAGGGATCACAAGTGCATACTCTATATAATTATTTTG  617

seq1  ATATAGAACTAAGTAATTACTAAATGCTACTATATCTTATTTTATGACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAACTAAGTAATTACTAAATGCTACTATATCTTATTTTATGACAC  667

seq1  TGAATAAACACAGCTTTATAACAAGTTGAAAATAAAAACAAATCAGGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAACACAGCTTTATAACAAGTTGAAAATAAAAACAAATCAGGCTG  717

seq1  CCAATGCATGAAATGTTCATGGCTCTTCAATTTACACTTTACATATTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCATGAAATGTTCATGGCTCTTCAATTTACACTTTACATATTCTC  767

seq1  TATGACAAGAATTTCTATTATGCTATTCTCTTTTTTTCTGCTATAATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAAGAATTTCTATTATGCTATTCTCTTTTTTTCTGCTATAATTAA  817

seq1  ATTATAAAAGTAATTGGCTGGTGCTGCACACTGCAGCAATGCCTTAATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAAGTAATTGGCTGGTGCTGCACACTGCAGCAATGCCTTAATCA  867

seq1  CATAGACAAACAGTTTTACAATAGCATACACCATTTGCCACATGGGGCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACAAACAGTTTTACAATAGCATACACCATTTGCCACATGGGGCAA  917

seq1  TGACATTATTGTATCAGACTATACACTCAAGACAGATAGCACATACTGGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTATTGTATCAGACTATACACTCAAGACAGATAGCACATACTGGC  967

seq1  TCTCACCACCCTGTTGGCAAGAGCAGAGACCAAGACTCATCCAGCACACC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCACCCTGTTGGCAAGAGCAGAGACCAAGACTCATCCAGCACACC  1017

seq1  CATTGGCACCTCTCTGGTGGAATTC  1075
      |||||||||||||||||||||||||
seq2  CATTGGCACCTCTCTGGTGGAATTC  1042

seq1: chr14_98438651_98439719
seq2: B6Ng01-046K19.g_67_1105

seq1  GAATTCTCTTCTAAGGAATTGCCATCTCTATTCAAATTAAGAGATACTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTAAGGAATTGCCATCTCTATTCAAATTAAGAGATACTTC  50

seq1  ATAAAAAGATATACATTCATTTAAAAGATTAGTTTTATTTTTATTAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGATATACATTCATTTAAAAGATTAGTTTTATTTTTATTAAGTA  100

seq1  GAATGAACTGTATTATGTATTTAAAATATTAAACTGAAGCAAAATTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAACTGTATTATGTATTTAAAATATTAAACTGAAGCAAAATTAATT  150

seq1  TGGAATCTCATGAGCAATAAAATTTTGGTTTGAAAATGTTTTTATATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCTCATGAGCAATAAAATTTTGGTTTGAAAATGTTTTTATATGTC  200

seq1  AAATATTACAAAATATGAAGTCATCATTGCCCTTTAAAATCCTTTCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTACAAAATATGAAGTCATCATTGCCCTTTAAAATCCTTTCAGCA  250

seq1  AGAATTCCCTAATTGTACTCCCACTTTATCTCACTGTACCAGTAAGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCCCTAATTGTACTCCCACTTTATCTCACTGTACCAGTAAGTAAA  300

seq1  TAAATTAACAAAATAGCTTTTATCACACAGAATAACCTTTTAACTGAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAACAAAATAGCTTTTATCACACAGAATAACCTTTTAACTGAGGG  350

seq1  ATTATCTGTGGTTTATTTTTCATTTCTCTCACTGCTGATAGCAGTTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTGTGGTTTATTTTTCATTTCTCTCACTGCTGATAGCAGTTCATG  400

seq1  CCTCATTGATTAGTTTGCTGAGGTGGTGACCAGAAATGAAAACACAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTGATTAGTTTGCTGAGGTGGTGACCAGAAATGAAAACACAGTCT  450

seq1  CTCAGAGAGTTTGCAAGGAATACACACACACACACACACACACACACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGAGTTTGCAAGGAATACACACACACACACACACACACACACACC  500

seq1  ACTACACAAAACACACATTCATTCTGTGCTTCTATGCCTGCTATTTAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACAAAACACACATTCATTCTGTGCTTCTATGCCTGCTATTTAGTT  550

seq1  TCCAAGGAGTAAAGAATTAAAAATTATGTGTCCATATAAGCCAATGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGAGTAAAGAATTAAAAATTATGTGTCCATATAAGCCAATGTACA  600

seq1  GCTTTGACTGCATCTTTTAGATTTCTTCCTCTTTCACATTTTATGCTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGACTGCATCTTTTAGATTTCTTCCTCTTTCACATTTTATGCTTAT  650

seq1  ATTATACTGTGACTATTTTAATTAAGTTGTCCATTTTATCATTTTCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTGTGACTATTTTAATTAAGTTGTCCATTTTATCATTTTCTGAG  700

seq1  GAATGAAAACGTCAAAGAGAGAAACAGTACTTGACAACTGAGACTCTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAACGTCAAAGAGAGAAACAGTACTTGACAACTGAGACTCTAGT  750

seq1  AGCAATATTCATATTGAAATTTTACAGAAATCTTATACTCACATTTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATATTCATATTGAAATTTTACAGAAATCTTATACTCACATTTAAAA  800

seq1  GGCAACATATGGATTTTGTGCTTAGTAGTCCTATATTGTATCTAACTTAA  850
      ||||||||||||| |||||||||||||||||||||||||||||||| |||
seq2  GGCAACATATGGA-TTTGTGCTTAGTAGTCCTATATTGTATCTAAC-TAA  848

seq1  TTCTCTTTCTTTCTTCATCCAAAATTAATTCTGGAGTACTTCATTCAGAG  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTCTCTTTCTTTCTTCATCC-AAATTAATTCTGGAGTACTTCATTCAGAG  897

seq1  CACTGTTTTTAACCAGTGTATAACATGTATATACTACACCCTAGGTTACC  950
      |||||||||    |||||||| |||||||||||||||| |||||  || |
seq2  CACTGTTTT---ACAGTGTAT-ACATGTATATACTACA-CCTAG--TA-C  939

seq1  TGTTGCTATCCTGAGCCTTTGATGAACTGTGTGTTCTAATGTTTAAAAAG  1000
      || |||||| ||||| |||||||| |||||||||||| |||||   ||||
seq2  TG-TGCTAT-CTGAG-CTTTGATG-ACTGTGTGTTCT-ATGTT---AAAG  981

seq1  ACCTTGACCCACTTTGCATGTTTCCTCAAAATAGCATTTACCAGTTTAAG  1050
      ||  |||||||| |||||||||| ||| ||||||||||   |||||| ||
seq2  AC--TGACCCAC-TTGCATGTTT-CTC-AAATAGCATT--ACAGTTT-AG  1023

seq1  ACCTTCAATATCTAGAGCA  1069
      | |||||   |||||||||
seq2  A-CTTCA--TTCTAGAGCA  1039