BAC Information

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BAC

Clone NameB6Ng01-050D01
Chromosome14 (Build37)
Map Location 73,292,611 - 73,293,759
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668482, LOC675957, Fndc3a, LOC100043721
Downstream geneLOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149, Rcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050D01.bB6Ng01-050D01.g
ACCDH874214DH874215
length1,1211,245
definitionDH874214|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D01, 5' end.DH874215|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttctactttatagtctattggtctgaaaaatgctggtatgtg
tcacatatatctgtgatgatggtacaaaaccatcttgacaagcagaagat
atgtcctcaagccaacactgggcacaaaaggctctttatttcccaggaaa
tgaaatcaaactgagaacaaagcagtgacttgggcagagaccgtcgtcga
gttggatttaccaacacagatgtccaggatggactctcagacctcagctg
ggcactgcctgagccttcttcagagtacaaggcatactgagtttaaagag
aaaaatatgaaagactgaaaaacgtaaacatgggttctatttctgcatta
tgccaacttttgaagggatacatggttccacattttgaactttaagtcaa
gcttaataatgtggacggataacattgtcaggagttgagtgagagaaata
gtgacatcgccttacagggaatcggaaaatagatagacatttctatctct
attctccttacaaagcattttaagggaagaattattactgtctttatttc
cttcttactttcttccctctcttcctttattgtagctatacatcccctct
ctgagcatgtacagtgtttgaactctgctctagatagtgatgatataata
atgaacacggaagacactagggaaaagggccctgcatcttgcctggacag
caccataaaggaggccctggtggtgcgggcacaggtgagctgggtcaaag
aacatgagtgcaggaatgccggcctctacactcctctatcatgagatggc
agcacacagaggtgatgctctccatcaccttggtcctcaccatctgtgac
aatcacgagagctggctctggggtcacgagggcagtgatctggccctgcc
ctcaccctgcaccttgcctgggcagcacatagagctggtcctggtggtag
gagtgggtgagccagctctgaggcaaagcaaacgaggggtccaccactca
taagctgtgaggtgtcaaagcaggaaatgttcttcacttcgacacacttt
gtagtcagagagctggcctcaaggcataaagcagagagtttccatgccct
cattgctagacacttggagaa
gaattcatacaggaactacagaggtaagcttcaccaaaaaaacacagaag
caagctttaccaacagaatacaagagacagaagagggaatctcaggcttt
gaagatatgaaatagatatgttcatcaaagaaaacattaaatctaaaaaa
ttcctgacacaaaatatccaggaaatccaggacactatgaaaagaccaaa
cctaagaataatagggaaagaagaagatggagaggagtagaacatcagtt
taaaggcccagaaaatatcttcaacaaactcatagaagaaaactttccta
acctaacgaaagagatgcctaaaaaggtatgcacagcatacagaacacca
aatagattggaccagaaaaaaggcccacttgtgacataatcaccaaaaca
ctaatcatagaaagaatattaaaagctgcaagagaaaaagaccaagtaac
atataaaggcagacctattagaataacacctgaattctcaatggagactc
taaaagccagaagagcctaaacagatgtgctgcagactctaagacaaaac
agatgccagtccagactactataccagcaaaacttacaatcactgtgcat
ggagaaaataaggcattccatgataaaaatcaaatttaaacaaatttgat
taattaaatttatctatctataaatccagccctccaaaagatggtagaag
gaaaactccaacaaaaggggggttaactacacccatgaaaacacagagaa
taaatagtctcagaccagcaaaatcaaagggagggaaatagacacacaca
ctaccaccaccatgatcaacaacaacaacaacataacaggaaccaatgat
cattggttattgatctctcacaatatcaatggtcttaattccccaataaa
aagataagactaacagaatggatgtgaaaacaggatccatccttctgctg
catctaagaaacacacttcagatcaggaaaagacatttcctcaggataac
gtttgggaaagatattccaagcactgggagctagagcatactgtatggag
aaaggatcttattccaataaaagggagaaaaaggaaaggaaaagataaat
gattttttttaaggaaggaaggctgggggtatgggaaggaataaggaaaa
atatccatttataactcagggtccctggccagtcactaagacggcactgc
ggtgatctagtggcctccctataagaacatgcctcggggccgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73292611_73293759
seq2: B6Ng01-050D01.b_47_1167

seq1  GAATTCTGTTCTACTTTATAGTCTATTGGTCTGAAAAATGCTGGTATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTACTTTATAGTCTATTGGTCTGAAAAATGCTGGTATGTG  50

seq1  TCACATATATCTGTGATGATGGTACAAAACCATCTTGACAAGCAGAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATATATCTGTGATGATGGTACAAAACCATCTTGACAAGCAGAAGAT  100

seq1  ATGTCCTCAAGCCAACACTGGGCACAAAAGGCTCTTTATTTCCCAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTCAAGCCAACACTGGGCACAAAAGGCTCTTTATTTCCCAGGAAA  150

seq1  TGAAATCAAACTGAGAACAAAGCAGTGACTTGGGCAGAGACCGTCGTCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCAAACTGAGAACAAAGCAGTGACTTGGGCAGAGACCGTCGTCGA  200

seq1  GTTGGATTTACCAACACAGATGTCCAGGATGGACTCTCAGACCTCAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATTTACCAACACAGATGTCCAGGATGGACTCTCAGACCTCAGCTG  250

seq1  GGCACTGCCTGAGCCTTCTTCAGAGTACAAGGCATACTGAGTTTAAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGCCTGAGCCTTCTTCAGAGTACAAGGCATACTGAGTTTAAAGAG  300

seq1  AAAAATATGAAAGACTGAAAAACGTAAACATGGGTTCTATTTCTGCATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATGAAAGACTGAAAAACGTAAACATGGGTTCTATTTCTGCATTA  350

seq1  TGCCAACTTTTGAAGGGATACATGGTTCCACATTTTGAACTTTAAGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACTTTTGAAGGGATACATGGTTCCACATTTTGAACTTTAAGTCAA  400

seq1  GCTTAATAATGTGGACGGATAACATTGTCAGGAGTTGAGTGAGAGAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATAATGTGGACGGATAACATTGTCAGGAGTTGAGTGAGAGAAATA  450

seq1  GTGACATCGCCTTACAGGGAATCGGAAAATAGATAGACATTTCTATCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATCGCCTTACAGGGAATCGGAAAATAGATAGACATTTCTATCTCT  500

seq1  ATTCTCCTTACAAAGCATTTTAAGGGAAGAATTATTACTGTCTTTATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTTACAAAGCATTTTAAGGGAAGAATTATTACTGTCTTTATTTC  550

seq1  CTTCTTACTTTCTTCCCTCTCTTCCTTTATTGTAGCTATACATCCCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTACTTTCTTCCCTCTCTTCCTTTATTGTAGCTATACATCCCCTCT  600

seq1  CTGAGCATGTACAGTGTTTGAACTCTGCTCTAGATAGTGATGATATAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCATGTACAGTGTTTGAACTCTGCTCTAGATAGTGATGATATAATA  650

seq1  ATGAACACGGAAGACACTAGGGAAAAGGGCCCTGCATCTTGCCTGGACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACACGGAAGACACTAGGGAAAAGGGCCCTGCATCTTGCCTGGACAG  700

seq1  CACCATAAAGGAGGCCCTGGTGGTGCGGGCACAGGTGAGCTGGGTCAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATAAAGGAGGCCCTGGTGGTGCGGGCACAGGTGAGCTGGGTCAAAG  750

seq1  AACATGAGTGCAGGAATGCCGGCCTCTACACTCCTCTATCATGAGATGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAGTGCAGGAATGCCGGCCTCTACACTCCTCTATCATGAGATGGC  800

seq1  AGCACACAGAGGTGATGCTCTCCATCACCTTGGTCCTCACCATCTGTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACAGAGGTGATGCTCTCCATCACCTTGGTCCTCACCATCTGTGAC  850

seq1  AATCAGGAGAGCTGGCTCTGGGGTCACGAGGGCAGGTGATCTGGCCCTGC  900
      ||||| |||||||||||||||||||||||||||| |||||||||||||| 
seq2  AATCACGAGAGCTGGCTCTGGGGTCACGAGGGCA-GTGATCTGGCCCTG-  898

seq1  CCCTCACCCTGCACCTTGCCTGGGCAGCACAATAGAGCTGGTCCTGGTGG  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCCTCACCCTGCACCTTGCCTGGGCAGCAC-ATAGAGCTGGTCCTGGTGG  947

seq1  TTAGGAGTGGGTGAGCCAGCTCTGAGGGCAAAAGCAAACGAGGGGGTCCC  1000
       ||||||||||||||||||||||||||   |||||||||||||||   ||
seq2  -TAGGAGTGGGTGAGCCAGCTCTGAGG--CAAAGCAAACGAGGGG--TCC  992

seq1  ACCACTCATAAGCTGTGAGGTGTCATAGGCAAGGGAAATGTTCCCTCCCA  1050
      ||||||||||||||||||||||||| | |||  |||||||||        
seq2  ACCACTCATAAGCTGTGAGGTGTCA-AAGCA--GGAAATGTT--------  1031

seq1  CCTCCCACCACCACCTCTGGTAGTCCAGAGAGCTGGCCTCAAGGCCATGA  1100
      | || |  |  |||   | ||||| ||||||||||||||||||| ||| |
seq2  CTTCACTTCGACACACTTTGTAGT-CAGAGAGCTGGCCTCAAGG-CAT-A  1078

seq1  AAGCAGGAGAGTTATCCATGCCCCTCATTGGCTAGAACACTTGGGAGAA  1149
      ||||| ||||||| |||||| |||||||| ||||| |||||| ||||||
seq2  AAGCA-GAGAGTT-TCCATG-CCCTCATT-GCTAG-ACACTT-GGAGAA  1121