BAC Information

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BAC

Clone NameB6Ng01-050F19
Chromosome14 (Build37)
Map Location 113,071,434 - 113,195,704
singlet/doubletdoublet
Overlap genenone
Upstream geneSlitrk5, LOC100043501, EG223186
Downstream geneLOC100043509, Tpm3-rs7, LOC100043510
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050F19.bB6Ng01-050F19.g
ACCDH874330DH874331
length1,097408
definitionDH874330|Mus musculus domesticus DNA, BAC clone: B6Ng01-050F19, 5' end.DH874331|Mus musculus domesticus DNA, BAC clone: B6Ng01-050F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,071,434 - 113,072,564)(113,195,291 - 113,195,704)
sequence
gaattcccaaagatttagacagctgcaacagttattcattcttataaata
aagatagcaagaaccccccactgttaatactattataaaattcatgcctc
tacaaaatggcaaaattccatagattccctgtggagcctcccagggttac
tagaaatgagcacaagaaacaatttaagcatttgttcagagactcctatt
cagcatacattttcttacagttcaacaattatactaaattgttttacctg
tataataactatgctcatgtgcacatgacttgatcacattgaaagcatat
ctgttttaaaacaggtttgtatatgattaacaatggcttgaaataaattt
ctaggaaatattattttaattcagagattaatttaaaagctaccatccaa
gtactttgaacagtatactttcttaaagtgtacagttaaaatgaagatat
tattctggtacatatcttacctgctgattttagttaaaatgtaattacaa
attaatttagcacttcaattatatctttaatactctatatggcaggtagg
aagggtggcgtgctacccaaaataagaataaattggaaacataaatcatc
gttacattaaggtatctaacactacagatatcaaatttaaaaagtgtttc
tgtgttccattttttatattagattgctttataatttaaagattcttaag
ttttaggaaaaaagttcgtagagtgttatggacaccaaaaatgtaatgtg
aaactttgttcttaaggacaatgaacaatattctaaattgggtgaaaata
tatctaacacttaaatcttatatccacaatctgaaaccttgtattaaacc
acggataagtcatatatatttgagtaccattctataacaattagactatg
agacatttagtgatgataacattttacctaagaaatattgtgactctgtg
accctcacaagcatcatgcttgtacacagttgacatgacatcatagccca
atgctatcagaagcctgtgacttctgtaagattttccacctctgtttggt
atacctagtaacatgtatctctctagatggattgcactggaattttt
agtaaatacaaaacaagtcattgtgctagtctacagatatatgataatga
aataaattttatcttgttattgtagttattgaactatatagtatttttct
caccatgcaccaacataaacaaaatcattttacgtataatgtacagacaa
actttaagctgtatgattttattttactttaaattcttttacccaatatc
aacataggagagaaatgacttttgtggaattactctttcgtttgtttgat
ttttgtttgttggtttggtttggttggatttggtttggtttgttttggtt
cagagtaggatactttcctgtagctaatgctgtcctggaacttactatgt
agccaacactagccttgaaattgcagtgatatttgtacctcagcctccca
agtggtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113071434_113072564
seq2: B6Ng01-050F19.b_45_1141

seq1  GAATTCCCAAAGATTTAGACAGCTGCAACAGTTATTCATTCTTATAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAAGATTTAGACAGCTGCAACAGTTATTCATTCTTATAAATA  50

seq1  AAGATAGCAAGAACCCCCCACTGTTAATACTATTATAAAATTCATGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGCAAGAACCCCCCACTGTTAATACTATTATAAAATTCATGCCTC  100

seq1  TACAAAATGGCAAAATTCCATAGATTCCCTGTGGAGCCTCCCAGGGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAATGGCAAAATTCCATAGATTCCCTGTGGAGCCTCCCAGGGTTAC  150

seq1  TAGAAATGAGCACAAGAAACAATTTAAGCATTTGTTCAGAGACTCCTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGAGCACAAGAAACAATTTAAGCATTTGTTCAGAGACTCCTATT  200

seq1  CAGCATACATTTTCTTACAGTTCAACAATTATACTAAATTGTTTTACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATACATTTTCTTACAGTTCAACAATTATACTAAATTGTTTTACCTG  250

seq1  TATAATAACTATGCTCATGTGCACATGACTTGATCACATTGAAAGCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAACTATGCTCATGTGCACATGACTTGATCACATTGAAAGCATAT  300

seq1  CTGTTTTAAAACAGGTTTGTATATGATTAACAATGGCTTGAAATAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTAAAACAGGTTTGTATATGATTAACAATGGCTTGAAATAAATTT  350

seq1  CTAGGAAATATTATTTTAATTCAGAGATTAATTTAAAAGCTACCATCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAATATTATTTTAATTCAGAGATTAATTTAAAAGCTACCATCCAA  400

seq1  GTACTTTGAACAGTATACTTTCTTAAAGTGTACAGTTAAAATGAAGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGAACAGTATACTTTCTTAAAGTGTACAGTTAAAATGAAGATAT  450

seq1  TATTCTGGTACATATCTTACCTGCTGATTTTAGTTAAAATGTAATTACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGGTACATATCTTACCTGCTGATTTTAGTTAAAATGTAATTACAA  500

seq1  ATTAATTTAGCACTTCAATTATATCTTTAATACTCTATATGGCAGGTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTAGCACTTCAATTATATCTTTAATACTCTATATGGCAGGTAGG  550

seq1  AAGGGTGGCGTGCTACCCAAAATAAGAATAAATTGGAAACATAAATCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGGCGTGCTACCCAAAATAAGAATAAATTGGAAACATAAATCATC  600

seq1  GTTACATTAAGGTATCTAACACTACAGATATCAAATTTAAAAAGTGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATTAAGGTATCTAACACTACAGATATCAAATTTAAAAAGTGTTTC  650

seq1  TGTGTTCCATTTTTTATATTAGATTGCTTTATAATTTAAAGATTCTTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCCATTTTTTATATTAGATTGCTTTATAATTTAAAGATTCTTAAG  700

seq1  TTTTAGGAAAAAAGTTCGTAGAGTGTTATGGACACCAAAAATGTAATGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGAAAAAAGTTCGTAGAGTGTTATGGACACCAAAAATGTAATGTG  750

seq1  AAACTTTGTTCTTAAGGACAATGAACAATATTCTAAATTGGGTGAAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGTTCTTAAGGACAATGAACAATATTCTAAATTGGGTGAAAATA  800

seq1  TATCTAACACTTAAATCTTATATCCACAATCTGAAACCTTGTATTAAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAACACTTAAATCTTATATCCACAATCTGAAACCTTGTATTAAACC  850

seq1  ACGGATAAAGTCAATATATATTTGAGTACCATTCTAATAAACAAATTAGA  900
      |||||| ||||| |||||||||||||||||||||| ||||   |||||||
seq2  ACGGAT-AAGTC-ATATATATTTGAGTACCATTCT-ATAA--CAATTAGA  895

seq1  CTATGAAGAACATTTTAGTGAATGATAAACATTTTTACCCTAAAGAAAAT  950
      ||||||   ||| ||||||| ||||| |||| |||||||   ||||||  
seq2  CTATGA--GACA-TTTAGTG-ATGAT-AACA-TTTTACC--TAAGAAA--  935

seq1  TATTGTGACTCTGTGACACTCACAAAGCCATCATTGCTTGTACACAGTAT  1000
      ||||||||||||||||| |||||||   ||||| |||||||||||||| |
seq2  TATTGTGACTCTGTGACCCTCACAA--GCATCA-TGCTTGTACACAGT-T  981

seq1  GACATGACATCATAGCCCAAATGCTATTCAGAAGGCCTGTGACTTCTGTA  1050
      |||||||||||||||||| ||||||| |||||| ||||||||||||||||
seq2  GACATGACATCATAGCCC-AATGCTA-TCAGAA-GCCTGTGACTTCTGTA  1028

seq1  AGAATCTTTCCAACTCTGTTGTGTTAATACCTTAAGTTAACATGTTATCT  1100
      |||   |||||| |||||||  ||  ||||||  || ||||||| |||||
seq2  AGA--TTTTCCACCTCTGTTTGGT--ATACCT--AG-TAACATG-TATCT  1070

seq1  CTCATAGATGGATTGCAACTTTGAAATTTTT  1131
      ||| |||||||||||||    || |||||||
seq2  CTC-TAGATGGATTGCA---CTGGAATTTTT  1097

seq1: chr14_113195291_113195704
seq2: B6Ng01-050F19.g_66_479 (reverse)

seq1  TTACCACTTGGGAGGCTGAGGTAAAAATATCACTGCAATTTCAAGGCTAG  50
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTACCACTTGGGAGGCTGAGGTACAAATATCACTGCAATTTCAAGGCTAG  50

seq1  TGTTGGCTACATAGTAAGTTCCAGGACAGCATTAGCTACAGGAAAGTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCTACATAGTAAGTTCCAGGACAGCATTAGCTACAGGAAAGTATC  100

seq1  CTACTCTGAACCAAAACAAACCAAACCAAATCCAACCAAACCAAACCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTGAACCAAAACAAACCAAACCAAATCCAACCAAACCAAACCAAC  150

seq1  AAACAAAAATCAAACAAACGAAAGAGTAATTCCACAAAAGTCATTTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAATCAAACAAACGAAAGAGTAATTCCACAAAAGTCATTTCTCT  200

seq1  CCTATGTTGATATTGGGTAAAAGAATTTAAAGTAAAATAAAATCATACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGTTGATATTGGGTAAAAGAATTTAAAGTAAAATAAAATCATACAG  250

seq1  CTTAAAGTTTGTCTGTACATTATACGTAAAATGATTTTGTTTATGTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGTTTGTCTGTACATTATACGTAAAATGATTTTGTTTATGTTGGT  300

seq1  GCATGGTGAGAAAAATACTATATAGTTCAATAACTACAATAACAAGATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTGAGAAAAATACTATATAGTTCAATAACTACAATAACAAGATAA  350

seq1  AATTTATTTCATTATCATATATCTGTAGACTAGCACAATGACTTGTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTCATTATCATATATCTGTAGACTAGCACAATGACTTGTTTTG  400

seq1  TATTTACTGAATTC  414
      ||||||||||||||
seq2  TATTTACTGAATTC  414