BAC Information

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BAC

Clone NameB6Ng01-050L17
Chromosome14 (Build37)
Map Location 99,387,251 - 99,388,240
singlet/doubletsinglet
Overlap genenone
Upstream geneDach1, LOC635593, LOC619716
Downstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623, Klf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050L17.bB6Ng01-050L17.g
ACCDH874588DH874589
length9581,201
definitionDH874588|Mus musculus domesticus DNA, BAC clone: B6Ng01-050L17, 5' end.DH874589|Mus musculus domesticus DNA, BAC clone: B6Ng01-050L17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcattatctttcggtcacagccatgcaccacctattcctcca
aacactccgcatgaagcttcagcttgccttttcccaacacaggcaccttg
gtcatccttgggcctctttgccctgccctttcctcacaccatttatcgct
ttctaacacacaccaaattatttatcggtgacgtcgatagctagccatct
tttgccaccaacacataagctttaagagggtagaaattttgttccttcca
ttgatatattcctacatgaagttactgttttatcataaaaattcactctt
ttcttcagtgaagaaaaagctcattagaatgaaatttacaaaaaggagcc
acattaattgcaaataccaagcattggttatcacgggaacactcagagca
tgaaggtaggtcataaaggtacattaaggcctaagaggcccttccaacct
ctgtgaatgaataaatgaatgaatgtcagagagggacaaaccaccaataa
gatgattgtgactacataagattactctcacagtctagacatccccaact
tgcagtgtccactaaaatagaatcttttgcaccatcacaaacccaatcct
tcccaaagacaatagaaaatggaattgtgagctgggcagtggtggcaccc
accttcaatcccagcacctgggaggcagaggcaggcagatttctgagttc
gtggccaggctagtctacagagtgagttccaggacagccagggctacaca
gagaaaccctgtctcaaaaaaccaaaatgaggaggaggaggaagaagggg
aggaggaggagatgaatatgtagaatgatggaaaaggagatatagagaga
gaagatgagaagagagatagagagagagatgagacagagatgagacgaga
gagatatgattgcttaacagaaaccaatcagttgcctgatctaaatcaat
ttctacca
gaattcccattttctttgtcaagtgaagcatcaagtgagttgacagaagt
gagaagtgtgagttggaggtttgtagccagaggaagggagggaaggccta
aaacagctctcaggagactggaaggatcagggggaaaagcccagcggtgc
cccactggaggctgctaacaacgaattagaagtacttggtgctgctaatg
ggattttctccccagtaatgctcagctagacaaacagaggtgccttgggc
tattttgataaaaagaaagttgaaattaaaggccatcaacaagagagatg
ttaaagatggataaggcagttaagaggatagaaaacatacttttggactg
attcaaccatgtgaattagaaattttgttataaacacatagctgagaact
gtggctgagtattctgatgatgtgcacaagcagagaagcagatgccgatg
tgaagggagatatgcaaaggtgtacaaacctgcagacctgacctggggat
atagctcagaaaacagcacatgtctagcatatgcctagcacatgcaaagc
tctgggctccatccacagcactgaaaaagaactgaaacacagtggggagg
gaaataaaagcacaaacgcttagacagtcacatctgaacgtgacgtcatc
tttaactttcattcacctgacctaattgtcacctgacgtaagtcttggag
gtttatttgccacagtctgctaacctaggctagtcctgggaagcttctgg
cctccatacaatctaatctagcctagaatgtttcagcctctgagatttac
tgctaaataagctcaccctttctagatctttctgatctctggctacctgg
ctcaactcagctgtctggctcaaactctccaagctgactgattctatctg
gcatctctcttggctctgacttttgctctgctggcccaaactaactctag
taatctgtcctaatctctggctgctcgcatctctgcttgtctgttttcac
ctctgtctagctgtctctctgcagctgctctgtacactgttccggtaact
gccccttaagagctctttcctctcgctcctgaagtcggaaattccatctg
caggcttttcgatgtaccttgtcgcactcataggcatactcacatgagtc
ctcactagcctccctatgagtgtcaaggttcgtatttcgcaacacgtaaa
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99387251_99388240
seq2: B6Ng01-050L17.b_46_1003

seq1  GAATTCCTTCATTATCTTTCGGTCACAGCCATGCACCACCTATTCCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCATTATCTTTCGGTCACAGCCATGCACCACCTATTCCTCCA  50

seq1  AACACTCCGCATGAAGCTTCAGCTTGCCTTTTCCCAACACAGGCACCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCCGCATGAAGCTTCAGCTTGCCTTTTCCCAACACAGGCACCTTG  100

seq1  GTCATCCTTGGGCCTCTTTGCCCTGCCCTTTCCTCACACCATTTATCGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCTTGGGCCTCTTTGCCCTGCCCTTTCCTCACACCATTTATCGCT  150

seq1  TTCTAACACACACCAAATTATTTATCGGTGACGTCGATAGCTAGCCATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACACACACCAAATTATTTATCGGTGACGTCGATAGCTAGCCATCT  200

seq1  TTTGCCACCAACACATAAGCTTTAAGAGGGTAGAAATTTTGTTCCTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCACCAACACATAAGCTTTAAGAGGGTAGAAATTTTGTTCCTTCCA  250

seq1  TTGATATATTCCTACATGAAGTTACTGTTTTATCATAAAAATTCACTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATATTCCTACATGAAGTTACTGTTTTATCATAAAAATTCACTCTT  300

seq1  TTCTTCAGTGAAGAAAAAGCTCATTAGAATGAAATTTACAAAAAGGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGTGAAGAAAAAGCTCATTAGAATGAAATTTACAAAAAGGAGCC  350

seq1  ACATTAATTGCAAATACCAAGCATTGGTTATCACGGGAACACTCAGAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAATTGCAAATACCAAGCATTGGTTATCACGGGAACACTCAGAGCA  400

seq1  TGAAGGTAGGTCATAAAGGTACATTAAGGCCTAAGAGGCCCTTCCAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTAGGTCATAAAGGTACATTAAGGCCTAAGAGGCCCTTCCAACCT  450

seq1  CTGTGAATGAATAAATGAATGAATGTCAGAGAGGGACAAACCACCAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAATGAATAAATGAATGAATGTCAGAGAGGGACAAACCACCAATAA  500

seq1  GATGATTGTGACTACATAAGATTACTCTCACAGTCTAGACATCCCCAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTGTGACTACATAAGATTACTCTCACAGTCTAGACATCCCCAACT  550

seq1  TGCAGTGTCCACTAAAATAGAATCTTTTGCACCATCACAAACCCAATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGTCCACTAAAATAGAATCTTTTGCACCATCACAAACCCAATCCT  600

seq1  TCCCAAAGACAATAGAAAATGGAATTGTGAGCTGGGCAGTGGTGGCACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAGACAATAGAAAATGGAATTGTGAGCTGGGCAGTGGTGGCACCC  650

seq1  ACCTTCAATCCCAGCACCTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAATCCCAGCACCTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTC  700

seq1  GTGGCCAGGCTAGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCAGGCTAGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACA  750

seq1  GAGAAACCCTGTCTCAAAAAACCAAAATGAGGAGGAGGAGGAAGAAGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCCTGTCTCAAAAAACCAAAATGAGGAGGAGGAGGAAGAAGGGG  800

seq1  AGGAGGAGGAGGAGGAAGAAGGAAGAAGGAAGGAAAAGGAAGAAGAAGAA  850
      |||||||||| || |||  | | |||| || ||||||||           
seq2  AGGAGGAGGA-GATGAA-TATGTAGAATGATGGAAAAGG-----------  837

seq1  GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  900
              |||   |||   |||||| | ||||||   |||   |||   
seq2  --------AGATATAGAGAGAGAAGATG-AGAAGA--GAGATAGAGAGAG  876

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATGAAATTGCTTTAACAG  950
      ||| | |||   ||| | ||| | |||   | |||  ||||| |||||||
seq2  AGATG-AGACAGAGATG-AGACG-AGAGAGATATG--ATTGC-TTAACAG  920

seq1  AGACCCAATCAGTTGCCTGGATCTAAATCAATTTCTACCA  990
      | | |||||||||||||| |||||||||||||||||||||
seq2  A-AACCAATCAGTTGCCT-GATCTAAATCAATTTCTACCA  958