BAC Information

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BAC

Clone NameB6Ng01-053G03
Chromosome14 (Build37)
Map Location 80,702,654 - 80,788,071
singlet/doubletdoublet
Overlap geneLOC672828
Upstream geneNarg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC639207
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053G03.bB6Ng01-053G03.g
ACCDH876447DH876448
length1,0831,081
definitionDH876447|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G03, 5' end.DH876448|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,786,980 - 80,788,071)(80,702,654 - 80,703,743)
sequence
gaattccttctcttcgtcactaatacgatatttattctatttttattttc
actgcttgaataaaactctctgaccaagtgcaacttagagaggtaaactt
ttatatcagcttacatttctggactatagtccatctctgaaggaagtcag
gacaggaattcatggcaagaattaagaggcaagaactgaagcagacacca
tggaaaaaaatactgctgactggcttgctccctatgtgggtcatggtctg
gctgacaagaagctagctttctcatatcacctaggcccacctgctaaggg
atagtccctcccacagtgggctaggctcttccacatcaattatcagtcaa
ggcagatttcacggatatggccacaggccagtctaattgaggtaatttct
ttaattgatatttcctattctcagatgtttcaaagctgtgtcacttgata
ataaacatttaggcaatttctaggttgaaaagtctgatcatgtggctcac
tctccaaatttctgtaatggcactcttctgaccctaacatcaattctaag
ctcaagtgaaaaagaaaagaaaaggaaaaaaaaaaaaagctccaacgccc
cctttcaagaatgtccctatcttgctttttttttttttaacctagatcca
gggtattttatgtacatttaaagcagtctactacagtagcttattagaaa
tgtcatttcacacaccatttccacacaggcaaatctgcatttcagaagcc
aggaacatgtattttaatacgttgttaactgattttgatacatgctacag
ttggatacatgctacagtttgggaaagacttacatagataattcctacct
attgttggagtctcgaaaattcagcactgtccttccacaccagcactgag
gccatagcattgggtgagtcaaatgcctgcatgaattcccatagcatcct
gtgcatgtgccatgcatgccaatggcagcaaagcatcctacggattggct
ttgcatgccatgcaattgtgtgatcagtatttcctctctgagctgtttaa
tcctcaaagaaaagattactctaaactgccctt
gaattcccgaagtcactggctttgcttgaccaaatggaggttctcatatg
aatttctattttgaggctattttttttcttctactggaagaaacctttcc
ataacttttcaaatctggttgattttgcacttgctatttgaaaaagtagc
tgctgggaataataactgaaataaaattatatcagacaaatggttgtttc
cagctaatgtgcctgaggaaataatcaatagctgtagtgttggaaaatca
agtatgttgacattaatattactatgttttcctcttcccactaacatttt
agattgtgcctctaaagcatttattgttcaaggctagcagtcttcagata
tatctcagtaattcagcatgagttttttttataggctgctaattgttgtc
tcttgcttgtggtatataatttcattaaagtttatggttatttgaatatg
catgtattttttcttcttagttattttaattgataacctgtttccattta
catatgtatatttttcactactcaataataggctgccacattatgtttta
tagatttatgctatttatggtgatgtttgctattagtcataatgcacatt
ttctaaatataatttttgtatgcatttaatacatgcaaattattaatgaa
atgatcaaaatgctctagcaaatatcttcctgagctatttatgacatcag
tacataaatactggccattctagtccccactgtgagagtcttgcctgttg
tgacttagttctaatcactgctgtcctggggcctggcattgtctttaatc
acagcaatactgacatgtatcattttgacatgtatcatgtgcctgatcca
agatatgttctatcatgtgttcaactcttttgaaagactccgagctcaga
tattcaggggtagagctttttactataagtgaaagtgtgtattgtgcttc
gggatattcctgctttaatgaaagcctttaattaaaacacagtgatctct
tctgcttcttctcagtatcctcacccagtccttagggcagcgggctctgg
gtgtcttccacgggtctgggccagacactaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80786980_80788071
seq2: B6Ng01-053G03.b_45_1127 (reverse)

seq1  AAAGGCAGTTAAGAGATAATCTCTTCTTTGAGGGAATAAACAGCTCAGGA  50
      || ||||||| |||| |||||| |||||||| ||| ||||||||||| ||
seq2  AAGGGCAGTTTAGAG-TAATCTTTTCTTTGA-GGATTAAACAGCTCA-GA  47

seq1  GAGGAAATAACTGATCACACAATTGCCATTGGCATGCAAAGCCCAATCCG  100
      |||||||| |||||||||||||||||   |||||||||||| ||||||||
seq2  GAGGAAAT-ACTGATCACACAATTGC--ATGGCATGCAAAG-CCAATCCG  93

seq1  TAGGATGCTCTGCTGCCATTGGCATGCATGGCACAATGCACAGGATGCTA  150
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  TAGGATGCTTTGCTGCCATTGGCATGCATGGCAC-ATGCACAGGATGCTA  142

seq1  TGGGAATTCATGCAGGCATTTGACTCACCCAATGCTATGGGCCTCAGTGC  200
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGGGAATTCATGCAGGCATTTGACTCACCCAATGCTAT-GGCCTCAGTGC  191

seq1  TGGTGTGGAA-GACAGTGCTGAATTTTCGAGACTCCAACAAATAGGTAGG  249
      |||||||||| |||||||||||||||||||||||||||| ||||||||||
seq2  TGGTGTGGAAGGACAGTGCTGAATTTTCGAGACTCCAAC-AATAGGTAGG  240

seq1  AATTATCTATGTAAGTCTTTCCCAAACTGTAGCATGTATCCAACTGTAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTATGTAAGTCTTTCCCAAACTGTAGCATGTATCCAACTGTAGC  290

seq1  ATGTATCAAAATCAGTTAACAACGTATTAAAATACATGTTCCTGGCTTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAAAATCAGTTAACAACGTATTAAAATACATGTTCCTGGCTTCT  340

seq1  GAAATGCAGATTTGCCTGTGTGGAAATGGTGTGTGAAATGACATTTCTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCAGATTTGCCTGTGTGGAAATGGTGTGTGAAATGACATTTCTAA  390

seq1  TAAGCTACTGTAGTAGACTGCTTTAAATGTACATAAAATACCCTGGATCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTACTGTAGTAGACTGCTTTAAATGTACATAAAATACCCTGGATCT  440

seq1  AGGTTAAAAAAAAAAAAAGCAAGATAGGGACATTCTTGAAAGGGGGCGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAAAAAAAAAAAAGCAAGATAGGGACATTCTTGAAAGGGGGCGTT  490

seq1  GGAGCTTTTTTTTTTTTTCCTTTTCTTTTCTTTTTCACTTGAGCTTAGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTTTTTTTTTTTTTCCTTTTCTTTTCTTTTTCACTTGAGCTTAGAA  540

seq1  TTGATGTTAGGGTCAGAAGAGTGCCATTACAGAAATTTGGAGAGTGAGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTTAGGGTCAGAAGAGTGCCATTACAGAAATTTGGAGAGTGAGCC  590

seq1  ACATGATCAGACTTTTCAACCTAGAAATTGCCTAAATGTTTATTATCAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATCAGACTTTTCAACCTAGAAATTGCCTAAATGTTTATTATCAAG  640

seq1  TGACACAGCTTTGAAACATCTGAGAATAGGAAATATCAATTAAAGAAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAGCTTTGAAACATCTGAGAATAGGAAATATCAATTAAAGAAATT  690

seq1  ACCTCAATTAGACTGGCCTGTGGCCATATCCGTGAAATCTGCCTTGACTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAATTAGACTGGCCTGTGGCCATATCCGTGAAATCTGCCTTGACTG  740

seq1  ATAATTGATGTGGAAGAGCCTAGCCCACTGTGGGAGGGACTATCCCTTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGATGTGGAAGAGCCTAGCCCACTGTGGGAGGGACTATCCCTTAG  790

seq1  CAGGTGGGCCTAGGTGATATGAGAAAGCTAGCTTCTTGTCAGCCAGACCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGGCCTAGGTGATATGAGAAAGCTAGCTTCTTGTCAGCCAGACCA  840

seq1  TGACCCACATAGGGAGCAAGCCAGTCAGCAGTATTTTTTTCCATGGTGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCACATAGGGAGCAAGCCAGTCAGCAGTATTTTTTTCCATGGTGTC  890

seq1  TGCTTCAGTTCTTGCCTCTTAATTCTTGCCATGAATTCCTGTCCTGACTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGTTCTTGCCTCTTAATTCTTGCCATGAATTCCTGTCCTGACTT  940

seq1  CCTTCAGAGATGGACTATAGTCCAGAAATGTAAGCTGATATAAAAGTTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGAGATGGACTATAGTCCAGAAATGTAAGCTGATATAAAAGTTTA  990

seq1  CCTCTCTAAGTTGCACTTGGTCAGAGAGTTTTATTCAAGCAGTGAAAATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTAAGTTGCACTTGGTCAGAGAGTTTTATTCAAGCAGTGAAAATA  1040

seq1  AAAATAGAATAAATATCGTATTAGTGACGAAGAGAAGGAATTC  1092
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAATAAATATCGTATTAGTGACGAAGAGAAGGAATTC  1083

seq1: chr14_80702654_80703743
seq2: B6Ng01-053G03.g_68_1148

seq1  GAATTCCCGAAGTCACTGGCTTTGCTTGACCAAATGGAGGTTCTCATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGAAGTCACTGGCTTTGCTTGACCAAATGGAGGTTCTCATATG  50

seq1  AATTTCTATTTTGAGGCTATTTTTTTTCTTCTACTGGAAGAAACCTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTATTTTGAGGCTATTTTTTTTCTTCTACTGGAAGAAACCTTTCC  100

seq1  ATAACTTTTCAAATCTGGTTGATTTTGCACTTGCTATTTGAAAAAGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTTCAAATCTGGTTGATTTTGCACTTGCTATTTGAAAAAGTAGC  150

seq1  TGCTGGGAATAATAACTGAAATAAAATTATATCAGACAAATGGTTGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAATAATAACTGAAATAAAATTATATCAGACAAATGGTTGTTTC  200

seq1  CAGCTAATGTGCCTGAGGAAATAATCAATAGCTGTAGTGTTGGAAAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAATGTGCCTGAGGAAATAATCAATAGCTGTAGTGTTGGAAAATCA  250

seq1  AGTATGTTGACATTAATATTACTATGTTTTCCTCTTCCCACTAACATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTTGACATTAATATTACTATGTTTTCCTCTTCCCACTAACATTTT  300

seq1  AGATTGTGCCTCTAAAGCATTTATTGTTCAAGGCTAGCAGTCTTCAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGTGCCTCTAAAGCATTTATTGTTCAAGGCTAGCAGTCTTCAGATA  350

seq1  TATCTCAGTAATTCAGCATGAGTTTTTTTTATAGGCTGCTAATTGTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAGTAATTCAGCATGAGTTTTTTTTATAGGCTGCTAATTGTTGTC  400

seq1  TCTTGCTTGTGGTATATAATTTCATTAAAGTTTATGGTTATTTGAATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTGTGGTATATAATTTCATTAAAGTTTATGGTTATTTGAATATG  450

seq1  CATGTATTTTTTCTTCTTAGTTATTTTAATTGATAACCTGTTTCCATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTTTTTCTTCTTAGTTATTTTAATTGATAACCTGTTTCCATTTA  500

seq1  CATATGTATATTTTTCACTACTCAATAATAGGCTGCCACATTATGTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTATATTTTTCACTACTCAATAATAGGCTGCCACATTATGTTTTA  550

seq1  TAGATTTATGCTATTTATGGTGATGTTTGCTATTAGTCATAATGCACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTATGCTATTTATGGTGATGTTTGCTATTAGTCATAATGCACATT  600

seq1  TTCTAAATATAATTTTTGTATGCATTTAATACATGCAAATTATTAATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATATAATTTTTGTATGCATTTAATACATGCAAATTATTAATGAA  650

seq1  ATGATCAAAATGCTCTAGCAAATATCTTCCTGAGCTATTTATGACATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCAAAATGCTCTAGCAAATATCTTCCTGAGCTATTTATGACATCAG  700

seq1  TACATAAATACTGGCCATTCTAGTCCCCACTGTGAGAGTCTTGCCTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAATACTGGCCATTCTAGTCCCCACTGTGAGAGTCTTGCCTGTTG  750

seq1  TGACTTAGTTCTAATCACTGCTGTCCTGGGGCCTGGCATTGTCTTTAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAGTTCTAATCACTGCTGTCCTGGGGCCTGGCATTGTCTTTAATC  800

seq1  ACAGCAATACTGACATGTATCATTTTGACATGTATCATGTGCCTGATCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAATACTGACATGTATCATTTTGACATGTATCATGTGCCTGATCCA  850

seq1  AGATATGTTCTATCATGTGTTCAACTCTTTTGAAAGACTCACGAGCTCAG  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGATATGTTCTATCATGTGTTCAACTCTTTTGAAAGACTC-CGAGCTCAG  899

seq1  ATATTCAGGGGTAAGAGCTTTTTACTATAAGTTGAAAGTGTGTATTGTGC  950
      |||||||||||| |||||||||||||||||| ||||||||||||||||||
seq2  ATATTCAGGGGT-AGAGCTTTTTACTATAAG-TGAAAGTGTGTATTGTGC  947

seq1  TTCGGGAATATACCTGCTTTAATGGAAAGCCTTTAAGTAAAACCACAGTG  1000
      |||||| |||| ||||||||||| |||||||||||| ||||| |||||||
seq2  TTCGGG-ATATTCCTGCTTTAAT-GAAAGCCTTTAATTAAAA-CACAGTG  994

seq1  ATTCTCTTCTGCTCCTTCTCAGTATTCTCACCCAGTCCTTAGGGCAGGCG  1050
      | ||||||||||| ||||||||||| |||||||||||||||||||| |||
seq2  A-TCTCTTCTGCTTCTTCTCAGTATCCTCACCCAGTCCTTAGGGCA-GCG  1042

seq1  TGTCTCATGGTGTCTT-CACAGTTCTGGGTCCAGACACTAA  1090
       | |||  |||||||| ||| | |||||| |||||||||||
seq2  -GGCTCTGGGTGTCTTCCACGGGTCTGGG-CCAGACACTAA  1081