BAC Information

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BAC

Clone NameB6Ng01-055F11
Chromosome14 (Build37)
Map Location 29,394,558 - 29,466,511
singlet/doubletdoublet
Overlap genenone
Upstream geneErc2, LOC100040206, Wnt5a, LOC100040218
Downstream geneCacna2d3, Lrtm1, Ppia-ps15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055F11.bB6Ng01-055F11.g
ACCDH877818DH877819
length2521,067
definitionDH877818|Mus musculus domesticus DNA, BAC clone: B6Ng01-055F11, 5' end.DH877819|Mus musculus domesticus DNA, BAC clone: B6Ng01-055F11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,466,268 - 29,466,511)(29,394,558 - 29,395,637)
sequence
cacctgctggccacaccctgagcctttggtggatttaaggaaggaagttc
tcttccagaaacaaggacagttgatgggcatgtacaggctctccctcccc
cactcctgttctcactctgtctgctggtctctgtctctgcctctccatgt
gtctctgtctcttcatctctttctgtgtgtctttccctctctttttccct
ccctccctccctccctctctccctccctccctccccccttctctctctct
ct
gaattctttggttttgacatagtactctgcatagcctctcccctctccca
atgggttggctatatatggttctgcatatttaaattctgttgagatagct
cagtagataaagtacttaaagtgcaaacagaaggccccgagctcagacat
tcccttacccaaatccaggtgtgtgcctattactcctgcactgaagctca
atgaacaggcagcatagctaatcgatctgtgccaggttcagtgggaggtc
ctgcctcacaaaaaacgacatgaagaaccatagagggtgacatcgtaaca
ctgacttctggtttacacatgtgcattcatgggcaaaagccccttcccaa
acacacacacacacacacacacacacacacacacacacacacacacacac
ctaaagagagagaaagagaaagagacacagaaagagaggtttatttggct
ttggagatctagatttctgtgctctttaaagcaaactatgtctctagact
ctgtcttagttagggttttattgctataaagaggcaccatgaccattgca
attcttacaaaggaaaacctttaattggggctggcttacatttcaaaggt
ttagtccattatcatcatggtcaggaaggtgacacatgggcagacctggt
gctggagaggtagctgagaggtctatatccagatcagcaggcagcaggaa
gatagtgagacattgggcctggcttgagcatctgagatctcaaagcccat
ctccttgcaacacacttccttcaacaaagccaaacctattcccacaaggc
cacaccttctaatactatcatgggtctatgggagccattttcatttaaac
caccacagactttaccatacttgattaacatattcttttattttatacaa
aaaatatatgtttcatatgcattggtgtgtgcctttatatacatttatgt
gacaggttaggtcatctgtaactagagtacagacattattgtgctgctac
gtgggtgctgggatgactgattcctctgaagaacagctagtgctctacca
ctggccatctctccagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_29466268_29466511
seq2: B6Ng01-055F11.b_54_298 (reverse)

seq1  GAGAG-AGGGAGGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGA  49
      ||||| |||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAGGGGGGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGA  50

seq1  AAAAGAGAGGGAAAGACACACAGAAAGAGATGAAGAGACAGAGACACATG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAGGGAAAGACACACAGAAAGAGATGAAGAGACAGAGACACATG  100

seq1  GAGAGGCAGAGACAGAGACCAGCAGACAGAGTGAGAACAGGAGTGGGGGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGAGACAGAGACCAGCAGACAGAGTGAGAACAGGAGTGGGGGA  150

seq1  GGGAGAGCCTGTACATGCCCATCAACTGTCCTTGTTTCTGGAAGAGAACT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGCCTGTACATGCCCATCAACTGTCCTTGTTTCTGGAAGAGAACT  200

seq1  TCCTTCCTTAAATCCACCAAAGGCTCAGGGTGTGGCCAGCAGGTG  244
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTAAATCCACCAAAGGCTCAGGGTGTGGCCAGCAGGTG  245

seq1: chr14_29394558_29395637
seq2: B6Ng01-055F11.g_68_1134

seq1  GAATTCTTTGGTTTTGACATAGTACTCTGCATAGCCTCTCCCCTCTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGTTTTGACATAGTACTCTGCATAGCCTCTCCCCTCTCCCA  50

seq1  ATGGGTTGGCTATATATGGTTCTGCATATTTAAATTCTGTTGAGATAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTGGCTATATATGGTTCTGCATATTTAAATTCTGTTGAGATAGCT  100

seq1  CAGTAGATAAAGTACTTAAAGTGCAAACAGAAGGCCCCGAGCTCAGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGATAAAGTACTTAAAGTGCAAACAGAAGGCCCCGAGCTCAGACAT  150

seq1  TCCCTTACCCAAATCCAGGTGTGTGCCTATTACTCCTGCACTGAAGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTACCCAAATCCAGGTGTGTGCCTATTACTCCTGCACTGAAGCTCA  200

seq1  ATGAACAGGCAGCATAGCTAATCGATCTGTGCCAGGTTCAGTGGGAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAGGCAGCATAGCTAATCGATCTGTGCCAGGTTCAGTGGGAGGTC  250

seq1  CTGCCTCACAAAAAACGACATGAAGAACCATAGAGGGTGACATCGTAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCACAAAAAACGACATGAAGAACCATAGAGGGTGACATCGTAACA  300

seq1  CTGACTTCTGGTTTACACATGTGCATTCATGGGCAAAAGCCCCTTCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTCTGGTTTACACATGTGCATTCATGGGCAAAAGCCCCTTCCCAA  350

seq1  ACACACACACACACACACACACACACACACACACACACACACACACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACACACACAC  400

seq1  CTAAAGAGAGAGAAAGAGAAAGAGACACAGAAAGAGAGGTTTATTTGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAGAGAGAAAGAGAAAGAGACACAGAAAGAGAGGTTTATTTGGCT  450

seq1  TTGGAGATCTAGATTTCTGTGCTCTTTAAAGCAAACTATGTCTCTAGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGATCTAGATTTCTGTGCTCTTTAAAGCAAACTATGTCTCTAGACT  500

seq1  CTGTCTTAGTTAGGGTTTTATTGCTATAAAGAGGCACCATGACCATTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTAGTTAGGGTTTTATTGCTATAAAGAGGCACCATGACCATTGCA  550

seq1  ATTCTTACAAAGGAAAACCTTTAATTGGGGCTGGCTTACATTTCAAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTACAAAGGAAAACCTTTAATTGGGGCTGGCTTACATTTCAAAGGT  600

seq1  TTAGTCCATTATCATCATGGTCAGGAAGGTGACACATGGGCAGACCTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCATTATCATCATGGTCAGGAAGGTGACACATGGGCAGACCTGGT  650

seq1  GCTGGAGAGGTAGCTGAGAGGTCTATATCCAGATCAGCAGGCAGCAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAGGTAGCTGAGAGGTCTATATCCAGATCAGCAGGCAGCAGGAA  700

seq1  GATAGTGAGACATTGGGCCTGGCTTGAGCATCTGAGATCTCAAAGCCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTGAGACATTGGGCCTGGCTTGAGCATCTGAGATCTCAAAGCCCAT  750

seq1  CTCCTTGCAACACACTTCCTTCAACAAAGCCAAACCTATTCCCACAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGCAACACACTTCCTTCAACAAAGCCAAACCTATTCCCACAAGGC  800

seq1  CACACCTTCTAATACTATCATGGGTCTATGGGAGCCATTTTCATTTAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTTCTAATACTATCATGGGTCTATGGGAGCCATTTTCATTTAAAC  850

seq1  CACCACAGACTTTACCATACTTGATTAACATATTCTTTTATTTTATAACA  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACCACAGACTTTACCATACTTGATTAACATATTCTTTTATTTTAT-ACA  899

seq1  AAAAATATTATGTTTCATATGCATTGGTGTGTTGCCTTTATATACATTTA  950
      ||||||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  AAAAATA-TATGTTTCATATGCATTGGTGTG-TGCCTTTATATACATTTA  947

seq1  TGTGACAGGGTTAGGTCATCTGTAACTAGAGTTACAGACAATTATGTGCT  1000
      ||||||| ||||||||||||||||||||||| |||||||| |  ||||||
seq2  TGTGACA-GGTTAGGTCATCTGTAACTAGAG-TACAGACATTATTGTGCT  995

seq1  GCTACGTGGGTGCTGGGAATTGAACCTGGATCCTCTGGAAGAACAGCTAG  1050
      ||||||||||||||||||  |||  |||  |||||| |||||||||||||
seq2  GCTACGTGGGTGCTGGGA--TGA--CTGATTCCTCT-GAAGAACAGCTAG  1040

seq1  TGCTCCTAACCACTGAGCCATCTCTCCAGC  1080
      |||||   ||||||| ||||||||||||||
seq2  TGCTC--TACCACTG-GCCATCTCTCCAGC  1067