BAC Information

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BAC

Clone NameB6Ng01-055P09
Chromosome14 (Build37)
Map Location 73,386,723 - 73,518,551
singlet/doubletdoublet
Overlap geneLOC668487, LOC668489, Cysltr2, LOC100043149
Upstream geneLOC668482, LOC675957, Fndc3a, LOC100043721, LOC100043723
Downstream geneRcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055P09.bB6Ng01-055P09.g
ACCDH878266DH878267
length6371,068
definitionDH878266|Mus musculus domesticus DNA, BAC clone: B6Ng01-055P09, 5' end.DH878267|Mus musculus domesticus DNA, BAC clone: B6Ng01-055P09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,386,723 - 73,387,374)(73,517,476 - 73,518,551)
sequence
gaattctctttccatctttgttcacacctcatgctcctttggcagcgaag
agaagtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgt
gtgtgtctgtgtgtgtctgtgtgtgtctctgtgtgtctctgtgtgtctct
gtgtgtgtgtgtttaaagaggggtctgttgacagtagatatgaagtctaa
gcatgcttgtactatctaaagccaaaacttaagaaatgacaaacatcaac
ttcaaatacattatcttccatagttgaacaaaaaagtgtttccctcacac
agaacccttttcatttaaaatttgataggttacattggccagaatgtaag
ggcaatgaataacattgctgtgagtacctggtcttattttagaatctctc
tggaaatagagacaggtggaactctgtgagttcaaagccaaccttatcta
cacagtgagctccaggaaagctagaggccttgcctagggaaaaaaaaaaa
caattaattacaacaaaatagaatagattctccctcctctcatccaaaac
ccatccctttctgatccccagctctgtagcagatcatctgcataaaaaac
acagtcaatacgaggcaggacaatatgtctcccacta
gaattcctgtctctcagaccgccttctcctttattcaatctgggacctga
gccaattaaacagtaccactcagtggggctgggtcctccctcttcagtca
acctgttctggaaacatcctcatagacatgtctagtggtaggtggttcta
agtccagctgaaatgacaatgaagattaatcaccacagagtggacgaacg
agtaaatgaacagacggtagatggtcatatgaggtgatccataagagaga
attcagatacatggcatcggtggattctagaactacataatgaggctgtg
atttagcaactacaatggatttatacacaaaggtctctcagctagagatg
cgtgtcatcatggctggcttaccaaaagggcacaggcctctccagatgtg
gctccctgattttcgatttgcagcgcccagaactgaaaaacctagatgaa
tcctctcttttcaaatcaaattcatgggtgttcataccaacagaaaacag
cctgaagggaggaggttagggtggagtgacatggagtgaacacatgactg
gcctttgctgattctgaaatgcaggcaagaaaacacactatcttccaggg
ctttctggccctgcagacaccttgattttagcctatgaactccaatatgc
cctcatttcacaaaagaggacaagagccccaagactcactctgactctgc
cctaattcatacaagttggtgacctatctcaaatccatcaggacagtgaa
gactaggggttcataaatgcagcgttcggatttgtgaagtctgggctggg
atctggctccctgcttttccaacgtgctggcagacaaagcctggagccca
gggttcagatttctgctttcatcttgggatctgacaatctagaaaagcca
gggacatctgatgggattccacaggaggcagtagggatccatgtgtgtag
tctttggagatcgggatttattgtctcacaggacaaggcagaatataagg
catattctctatggtttcttgtgaggcaaatatcaccaatgggataagtt
tcttgggctcaggctgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73386723_73387374
seq2: B6Ng01-055P09.b_47_683

seq1  GAATTCTCTTTCCATCTTTGTTCACACCTCATGCTCCTTTGGCAGCGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTCCATCTTTGTTCACACCTCATGCTCCTTTGGCAGCGAAG  50

seq1  AGAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGT  100

seq1  GTGTGTCTGTGTGTGTCTGTGTGTGTCTCTGTGTGTCTCTGTGTGTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCTGTGTGTGTCTGTGTGTGTCTCTGTGTGTCTCTGTGTGTCTCT  150

seq1  GTGTGTGTGTGTTTAAAGAGGGGTCTGTTGACAGTAGATATGAAGTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTTTAAAGAGGGGTCTGTTGACAGTAGATATGAAGTCTAA  200

seq1  GCATGCTTGTACTATCTAAAGCCAAAACTTAAGAAATGACAAACATCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTTGTACTATCTAAAGCCAAAACTTAAGAAATGACAAACATCAAC  250

seq1  TTCAAATACATTATCTTCCATAGTTGAACAAAAAAGTGTTTCCCTCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATACATTATCTTCCATAGTTGAACAAAAAAGTGTTTCCCTCACAC  300

seq1  AGAACCCTTTTCATTTAAAATTTGATAGGTTACATTGGCCAGAATGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCTTTTCATTTAAAATTTGATAGGTTACATTGGCCAGAATGTAAG  350

seq1  GGCAATGAATAACATTGCTGTGAGTACCTGGTCTTATTTTAGAATCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATGAATAACATTGCTGTGAGTACCTGGTCTTATTTTAGAATCTCTC  400

seq1  TGGAAATAGAGACAGGTGGAACTCTGTGAGTTCAAAGCCAACCTTATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATAGAGACAGGTGGAACTCTGTGAGTTCAAAGCCAACCTTATCTA  450

seq1  CACAGTGAGCTCCAGGAAAGCTAGAGGCCTTGCCTAGGGAAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGAGCTCCAGGAAAGCTAGAGGCCTTGCCTAGGGAAAAAAAAAAA  500

seq1  CAATTAATTACAACAAAATAGAATAGATTCTCCCTCCTCTCATCCAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAATTACAACAAAATAGAATAGATTCTCCCTCCTCTCATCCAAAAC  550

seq1  CCATCCCTTTCTGATCCCCAGCTCTGTAGCAGATCATCTGCATAAAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTTTCTGATCCCCAGCTCTGTAGCAGATCATCTGCATAAAAAAC  600

seq1  ACAGTCAATACGAGGCAGGACAATATGTCT-CCACTAAAGCCAAACAACA  649
      |||||||||||||||||||||||||||||| ||||||             
seq2  ACAGTCAATACGAGGCAGGACAATATGTCTCCCACTA-------------  637

seq1  CTA  652
         
seq2  ---  637

seq1: chr14_73517476_73518551
seq2: B6Ng01-055P09.g_68_1135 (reverse)

seq1  GGCAGCCTGAAGCACAAGAAACCTATCCCATTTTGGTGATATCTGCCTCA  50
      ||||||||| ||| |||||||| |||||||  |||||||||| |||||||
seq2  GGCAGCCTG-AGCCCAAGAAACTTATCCCA--TTGGTGATATTTGCCTCA  47

seq1  CAGGAAA-CATAGAGAATTATGCCTTTATTATCTTGCCTTGTCCTGTGAG  99
      || |||| ||||||||| ||||||||   |||  ||||||||||||||||
seq2  CAAGAAACCATAGAGAA-TATGCCTT--ATATTCTGCCTTGTCCTGTGAG  94

seq1  ACAATAAATCCCATTCTCCAAAGACTTACACACATTGGATCCCTACTGCC  149
      ||||||||||||  ||||||||||| |||||||| |||||||||||||||
seq2  ACAATAAATCCCGATCTCCAAAGAC-TACACACA-TGGATCCCTACTGCC  142

seq1  TCCTTGTGGAATCCCATCAGATGTCCCTGGCTTTTCTAGATTGTCAGATC  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCC-TGTGGAATCCCATCAGATGTCCCTGGCTTTTCTAGATTGTCAGATC  191

seq1  CCAAGATGGAAGCAGGAATCTGAACCCTGGGCTCCAGGCTTTGTCTGCCA  249
      |||||||| |||||| ||||||||||||||||||||||||||||||||||
seq2  CCAAGATGAAAGCAGAAATCTGAACCCTGGGCTCCAGGCTTTGTCTGCCA  241

seq1  GCACGTTGGAAAAGCAGGGAGCCAGATCCCAGCCCAGACTTCACAAATCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTTGGAAAAGCAGGGAGCCAGATCCCAGCCCAGACTTCACAAATCC  291

seq1  GAACGCTGCATTTATGAACCCCTAGTCTTCACTGTCCTGATGGATTTGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGCTGCATTTATGAACCCCTAGTCTTCACTGTCCTGATGGATTTGAG  341

seq1  ATAGGTCACCAACTTGTATGAATTAGGGCAGAGTCAGAGTGAGTCTTGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTCACCAACTTGTATGAATTAGGGCAGAGTCAGAGTGAGTCTTGGG  391

seq1  GCTCTTGTCCTCTTTTGTGAAATGAGGGCATATTGGAGTTCATAGGCTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGTCCTCTTTTGTGAAATGAGGGCATATTGGAGTTCATAGGCTAA  441

seq1  AATCAAGGTGTCTGCAGGGCCAGAAAGCCCTGGAAGATAGTGTGTTTTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGGTGTCTGCAGGGCCAGAAAGCCCTGGAAGATAGTGTGTTTTCT  491

seq1  TGCCTGCATTTCAGAATCAGCAAAGGCCAGTCATGTGTTCACTCCATGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCATTTCAGAATCAGCAAAGGCCAGTCATGTGTTCACTCCATGTC  541

seq1  ACTCCACCCTAACCTCCTCCCTTCAGGCTGTTTTCTGTTGGTATGAACAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACCCTAACCTCCTCCCTTCAGGCTGTTTTCTGTTGGTATGAACAC  591

seq1  CCATGAATTTGATTTGAAAAGAGAGGATTCATCTAGGTTTTTCAGTTCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAATTTGATTTGAAAAGAGAGGATTCATCTAGGTTTTTCAGTTCTG  641

seq1  GGCGCTGCAAATCGAAAATCAGGGAGCCACATCTGGAGAGGCCTGTGCCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCTGCAAATCGAAAATCAGGGAGCCACATCTGGAGAGGCCTGTGCCC  691

seq1  TTTTGGTAAGCCAGCCATGATGACACGCATCTCTAGCTGAGAGACCTTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTAAGCCAGCCATGATGACACGCATCTCTAGCTGAGAGACCTTTG  741

seq1  TGTATAAATCCATTGTAGTTGCTAAATCACAGCCTCATTATGTAGTTCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAATCCATTGTAGTTGCTAAATCACAGCCTCATTATGTAGTTCTA  791

seq1  GAATCCACCGATGCCATGTATCTGAATTCTCTCTTATGGATCACCTCATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCACCGATGCCATGTATCTGAATTCTCTCTTATGGATCACCTCATA  841

seq1  TGACCATCTACCGTCTGTTCATTTACTCGTTCGTCCACTCTGTGGTGATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATCTACCGTCTGTTCATTTACTCGTTCGTCCACTCTGTGGTGATT  891

seq1  AATCTTCATTGTCATTTCAGCTGGACTTAGAACCACCTACCACTAGACAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCATTGTCATTTCAGCTGGACTTAGAACCACCTACCACTAGACAT  941

seq1  GTCTATGAGGATGTTTCCAGAACAGGTTGACTGAAGAGGGAGGACCCAGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATGAGGATGTTTCCAGAACAGGTTGACTGAAGAGGGAGGACCCAGC  991

seq1  CCCACTGAGTGGTACTGTTTAATTGGCTCAGGTCCCAGATTGAATAAAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGAGTGGTACTGTTTAATTGGCTCAGGTCCCAGATTGAATAAAGG  1041

seq1  AGAAGGCGGTCTGAGAGACAGGAATTC  1076
      |||||||||||||||||||||||||||
seq2  AGAAGGCGGTCTGAGAGACAGGAATTC  1068