BAC Information

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BAC

Clone NameB6Ng01-056H08
Chromosome14 (Build37)
Map Location 82,170,478 - 82,171,095
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056H08.bB6Ng01-056H08.g
ACCDH878608DH878609
length963620
definitionDH878608|Mus musculus domesticus DNA, BAC clone: B6Ng01-056H08, 5' end.DH878609|Mus musculus domesticus DNA, BAC clone: B6Ng01-056H08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatgtctgagaagcacctgagaaaatg
ttcaacatacttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tccacctcactctagacaggatggctaagatcaaaaattcaggtgacagc
agatgctggctaggatgtggagatacaggaacactcctccactgctggtg
tgattgcaagcttgtacaaccactctgtaagtcagtctggaggttcctta
gaaaattggacataatactacctgaagatctagcaataactctcctgggc
atataccaagaagttctaactggtaataagaacacatgctccactatgtt
catagcagccttatttataatagccagaagctggaaagaactcagaagtc
cctcaacagaagaatggatacagaaaatgttgtacatttacacaatagag
tactactctgctattaaaaacaatggttttatgaaattattcgacaaatg
gatgtatctggaggatatcatccttagtgaggtaacccaatcataaaaga
agtcattagatatgcactcactgataagtggatattagcccagaaaccta
gaacacccaagatcaatttgcaaaacagaagaaaatcaaaaagagggaag
actaatgggtggatacttcatttcctccttaggatagggaacaaaatacc
tatgaaaggagttacagagacaaactttggagctaagacgaaaggatgga
ctatccagagactaccccaactggggatacatcccataatcagcaccaaa
accattcaagtattgcatatgacagcaggatttgctgaaggaccctgtta
tagtcatcttatatgaggctatgccagtgcctgttaatacggaggtggga
tgccttattatctttaagatggaaaccgtgccccgttggagagaaatata
atgcatctttgac
gaattcttcccaaaccacacacacctccgctaacaaatcaatatggagca
tattttattaatagataatattgtctgttttgatctcattaatggcattg
gtatgtatttgttttttttttatttttaattttatgttggtgcatgtgag
tgcagttgtatggagggtagaagatgatgtgaggcaccctggtgctgggg
ctgaactgttgcccacatgaggggagtgctgggaactgaactatggctcc
ctgcaagaagcaggatgtgatcttagtttttgaaccttcttttaatcctc
agttaaattttcaattgatatccttgggtatttcaagtagaaaatacatg
ctaatacttattttcatacctggtataaatacccggtaataacttggttg
gagtagcacaatactgagaatttgttttagtacattcagattttaaatta
tatgtttgggatattttagaggaggtgatgacttttataaataaaggtct
tatgtattcttttgcaaattatatttcatgggttaatggtttcaaattgc
aacaaactcaagttattttttgtctgatctaaaatgagtgacttcctact
gttacttttttcaatttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82170478_82171095
seq2: B6Ng01-056H08.g_69_688 (reverse)

seq1  AATAAATTG-AAAAAGTAACAGTAGGAAGTCACTCATTTTAGGTCAGACA  49
      ||||||||| |||||||||||||||||||||||||||||||| |||||||
seq2  AATAAATTGAAAAAAGTAACAGTAGGAAGTCACTCATTTTAGATCAGACA  50

seq1  AAAAATAACTTGAGTTTGTTGCAATTTGAAACCATTAACCCATGAAATAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAACTTGAGTTTGTTGCAATTTGAAACCATTAACCCATGAAATAT  100

seq1  AATTTGC-AAAGAATACATAAGACCTTTATTTATAAAAGTCATCACCTCC  148
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCAAAAGAATACATAAGACCTTTATTTATAAAAGTCATCACCTCC  150

seq1  TCTAAAATATCCCAAACATATAATTTAAAATCTGAATGTACTAAAACAAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATATCCCAAACATATAATTTAAAATCTGAATGTACTAAAACAAA  200

seq1  TTCTCAGTATTGTGCTACTCCAACCAAGTTATTACCGGGTATTTATACCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGTATTGTGCTACTCCAACCAAGTTATTACCGGGTATTTATACCA  250

seq1  GGTATGAAAATAAGTATTAGCATGTATTTTCTACTTGAAATACCCAAGGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGAAAATAAGTATTAGCATGTATTTTCTACTTGAAATACCCAAGGA  300

seq1  TATCAATTGAAAATTTAACTGAGGATTAAAAGAAGGTTCAAAAACTAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATTGAAAATTTAACTGAGGATTAAAAGAAGGTTCAAAAACTAAGA  350

seq1  TCACATCCTGCTTCTTGCAGGGAGCCATAGTTCAGTTCCCAGCACTCCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCCTGCTTCTTGCAGGGAGCCATAGTTCAGTTCCCAGCACTCCCC  400

seq1  TCATGTGGGCAACAGTTCAGCCCCAGCACCAGGGTGCCTCACATCATCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGGCAACAGTTCAGCCCCAGCACCAGGGTGCCTCACATCATCTT  450

seq1  CTACCCTCCATACAACTGCACTCACATGCACCAACATAAAATTAAAAATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTCCATACAACTGCACTCACATGCACCAACATAAAATTAAAAATA  500

seq1  AAAAAAAAACAAATACATACCAATGCCATTAATGAGATCAAAACAGACAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAACAAATACATACCAATGCCATTAATGAGATCAAAACAGACAA  550

seq1  TATTATCTATTAATAAAATATGCTCCATATTGATTTGTTAGCGGAGGTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCTATTAATAAAATATGCTCCATATTGATTTGTTAGCGGAGGTGT  600

seq1  GTGTGGTTTGGGAAGAATTC  618
      ||||||||||||||||||||
seq2  GTGTGGTTTGGGAAGAATTC  620