BAC Information

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BAC

Clone NameB6Ng01-056M14
Chromosome14 (Build37)
Map Location 110,714,372 - 110,847,429
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056M14.bB6Ng01-056M14.g
ACCDH878841DH878842
length1,1341,034
definitionDH878841|Mus musculus domesticus DNA, BAC clone: B6Ng01-056M14, 5' end.DH878842|Mus musculus domesticus DNA, BAC clone: B6Ng01-056M14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,714,372 - 110,715,505)(110,846,389 - 110,847,429)
sequence
gaattcattaaacaatgacatttaaaagtttttcagtatgaaacaattta
atgacactattaatactgaatgaagtttttgctcaaatcacttccctgtt
tcctaattactctgaccatttaaatcatttagttacaatagaactggagc
taaaaagtaaagaaataaaattaatgtcaagacagtaatcaggatgagag
gatcgattgctgttaacattaataaaactgcaatgattaactcactgttt
ataaaaagaggaatatttactctctaaaattatatttgaaaataaagcat
tctgtaatttcataatgaattgcaatctaaaccttttcaagttttagtag
ttccaaaggaattgtggggacaccatcactttttgtaattttcattcaga
tacataaaatacaggttgttattttaattttcttctctttagtactttgt
agttaactacagggaaactatatgataaatcttcaacttaataaagtcag
aaaacaaaatccaatgaaatttagaaaacacacacacacacatacttgat
catagaactaaattctggaatgtaagtccatgaataaaaataataaagta
tcacatttagtttatagaaaaataaagtatgtataaaaatttttgtgcag
tgtactgactttgtttttcctacataatattaagagcctgcagaatggca
tttgaaaatgggagctttggccagactattagacctcaataaaggactga
aggcacaataacatgagacaggagaacatttttatttcttcttttcctct
gtagtagaaatttgttcaaaaatctagagggagtgtatatatataacttg
agcatcagtctccctgacagtgtgggtgtaactcccagctcctggtaaac
attttttttctttctcagttactcattctgcattcttaaagaagcctgag
aacggtctgcagagctttttttttttgctgttctcaacagcattcttatt
aatatattatttatactattaatacatcttatcatagatgattggggata
cctggttaagttcattaatactcatgaaatcaatgtccccaaaccataac
tttcttcagatgaaggattggagggaatcatgtg
gaattcagcataaatacattcactgaaaatttttatcactcattcttctc
ggtgtttcacattaaaatgtgtaaatcactatatttgttgtaatttctct
tgttatacatttatatatataatattaataaatgttgcttgcctattaaa
ttgctaagaatatatatgaaacatttcgcgctttggttaagtcctaaata
atgttgtatgcaaagctgtcttgttaagaaggtgaaagttatacaaacac
aacagttgtttgaatatctccattttgaattggttttcaacgttgatcta
tcttgatctatcttgagacctctcaatgctgaagcttccttttccctgct
tcggcagtgagacagatggtggcctgctgtgaatcaaatagtcctgttgt
ttttgcttttatatagagaataaaataatttaatggaaaacttctgtaat
tttaaatgtaagtaaaaatgcaagagcatagtttgtcagttagaaaattt
accagatccctcgaatgtccattcacttccggaaggccaagtggaagcag
ccctatggcttgcaattagataggtgagaataggacccagcaaaaagaaa
tatttaaatatgttaaatgttccaaacatagaacaaccatagtcaaatca
tactgaataacatatgggaatatgggaaaaagtattcctgaatgcagggg
gcaggtgagcatcacctgctctatagcactatagtgaagctgacacaacc
tgttttatagaaaacaaagtggatgcagaagagaaaagtggagttgcata
caaattgcgcacacagaatagcataacaagatcaaccttgactgtagtga
aacaatgtcaaaattagtattatctttggacattattttcaaacatatgc
agtgataaatgcagttaaaatattattcatttctaatgtgaaaagagaat
tctgagattatttcagaggatctcataaaacctctcaatataagtggata
ggttgcttttcaaaatcccaataagggcatttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110714372_110715505
seq2: B6Ng01-056M14.b_44_1177

seq1  GAATTCATTAAACAATGACATTTAAAAGTTTTTCAGTATGAAACAATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAACAATGACATTTAAAAGTTTTTCAGTATGAAACAATTTA  50

seq1  ATGACACTATTAATACTGAATGAAGTTTTTGCTCAAATCACTTCCCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACTATTAATACTGAATGAAGTTTTTGCTCAAATCACTTCCCTGTT  100

seq1  TCCTAATTACTCTGACCATTTAAATCATTTAGTTACAATAGAACTGGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATTACTCTGACCATTTAAATCATTTAGTTACAATAGAACTGGAGC  150

seq1  TAAAAAGTAAAGAAATAAAATTAATGTCAAGACAGTAATCAGGATGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTAAAGAAATAAAATTAATGTCAAGACAGTAATCAGGATGAGAG  200

seq1  GATCGATTGCTGTTAACATTAATAAAACTGCAATGATTAACTCACTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGATTGCTGTTAACATTAATAAAACTGCAATGATTAACTCACTGTTT  250

seq1  ATAAAAAGAGGAATATTTACTCTCTAAAATTATATTTGAAAATAAAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGAGGAATATTTACTCTCTAAAATTATATTTGAAAATAAAGCAT  300

seq1  TCTGTAATTTCATAATGAATTGCAATCTAAACCTTTTCAAGTTTTAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATTTCATAATGAATTGCAATCTAAACCTTTTCAAGTTTTAGTAG  350

seq1  TTCCAAAGGAATTGTGGGGACACCATCACTTTTTGTAATTTTCATTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAGGAATTGTGGGGACACCATCACTTTTTGTAATTTTCATTCAGA  400

seq1  TACATAAAATACAGGTTGTTATTTTAATTTTCTTCTCTTTAGTACTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAAATACAGGTTGTTATTTTAATTTTCTTCTCTTTAGTACTTTGT  450

seq1  AGTTAACTACAGGGAAACTATATGATAAATCTTCAACTTAATAAAGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACTACAGGGAAACTATATGATAAATCTTCAACTTAATAAAGTCAG  500

seq1  AAAACAAAATCCAATGAAATTTAGAAAACACACACACACACATACTTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAATCCAATGAAATTTAGAAAACACACACACACACATACTTGAT  550

seq1  CATAGAACTAAATTCTGGAATGTAAGTCCATGAATAAAAATAATAAAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAACTAAATTCTGGAATGTAAGTCCATGAATAAAAATAATAAAGTA  600

seq1  TCACATTTAGTTTATAGAAAAATAAAGTATGTATAAAAATTTTTGTGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTAGTTTATAGAAAAATAAAGTATGTATAAAAATTTTTGTGCAG  650

seq1  TGTACTGACTTTGTTTTTCCTACATAATATTAAGAGCCTGCAGAATGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGACTTTGTTTTTCCTACATAATATTAAGAGCCTGCAGAATGGCA  700

seq1  TTTGAAAATGGGAGCTTTGGCCAGACTATTAGACCTCAATAAAGGACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAATGGGAGCTTTGGCCAGACTATTAGACCTCAATAAAGGACTGA  750

seq1  AGGCACAATAACATGAGACAGGAGAACA-TTTTATTTCTTCTTTTCCTCT  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGGCACAATAACATGAGACAGGAGAACATTTTTATTTCTTCTTTTCCTCT  800

seq1  GTAGTAGAAATTTGTTCAAAAATCTAGAGGGAGTGTATATATATAACTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGAAATTTGTTCAAAAATCTAGAGGGAGTGTATATATATAACTTG  850

seq1  AGCATCAGTCTCCCTGACAGTGTGGTTGTAACTCCCAGCTCCTGGTAAAC  899
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGCATCAGTCTCCCTGACAGTGTGGGTGTAACTCCCAGCTCCTGGTAAAC  900

seq1  ATTTTTTTTC-TTCTCAGTTACTCATTCTGCATTCATTAAAGAAGCCTGA  948
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  ATTTTTTTTCTTTCTCAGTTACTCATTCTGCATTC-TTAAAGAAGCCTGA  949

seq1  GAACGGTCTGCAGAGCTTTTTTTTTTTCTGCTGTTCTCAACAGCATTCTT  998
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  GAACGGTCTGCAGAGCTTTTTTTTTT--TGCTGTTCTCAACAGCATTCTT  997

seq1  ATTAATTATATTATTTAATACATATTAAATACATCATATCATAGATGA-T  1047
      ||||| |||||||||| |||| |||| |||||||| |||||||||||| |
seq2  ATTAA-TATATTATTT-ATAC-TATT-AATACATCTTATCATAGATGATT  1043

seq1  GGGGATAACTGTTAAGGTTCA-TAATACTCATGAAATCAATGT-CCCAAA  1095
      ||||||| ||| | | ||||| ||||||||||||||||||||| ||||||
seq2  GGGGATACCTGGTTAAGTTCATTAATACTCATGAAATCAATGTCCCCAAA  1093

seq1  ACATAACATTCTTCAGATG-AGGATTG--AGGAATCAGTGTG  1134
       |||||| ||||||||||| |||||||   ||||||| ||||
seq2  CCATAACTTTCTTCAGATGAAGGATTGGAGGGAATCA-TGTG  1134

seq1: chr14_110846389_110847429
seq2: B6Ng01-056M14.g_70_1103 (reverse)

seq1  CTAAATGCCATTATTGTGAATTTTGAAAAGCAAAACCTAT-CACTTATAA  49
      ||||||||| |||||| | ||||||||||||  ||||||| ||||||| |
seq2  CTAAATGCCCTTATTG-GGATTTTGAAAAGC--AACCTATCCACTTAT-A  46

seq1  TTGAGATGTTTTTAATGAGAATCCTCCTGAAATAATTCTCAGAATTTCTC  99
      |||||| |||||  ||||| ||||| ||||||||| |||||||| |||||
seq2  TTGAGAGGTTTT--ATGAG-ATCCT-CTGAAATAA-TCTCAGAA-TTCTC  90

seq1  TTTTTCACATTAG-AATGAATAATATTTTAACTGCATTTATCACTGCATA  148
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  -TTTTCACATTAGAAATGAATAATATTTTAACTGCATTTATCACTGCATA  139

seq1  TGTTTTGAAAATAATGTCCAAAGATAATACTAATTTTGACATTGTTTCAC  198
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-TTTGAAAATAATGTCCAAAGATAATACTAATTTTGACATTGTTTCAC  188

seq1  TACAGTCAGGTTTGATCTTGTTATGCTATTCTGTGTGCGCAATTTGTATG  248
      |||||||| | |||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCAAGGTTGATCTTGTTATGCTATTCTGTGTGCGCAATTTGTATG  238

seq1  C-ACTCCACTTTTCTCTTCTGCATCCACTTTGTTTTCTAT-AAACAGGTT  296
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAACTCCACTTTTCTCTTCTGCATCCACTTTGTTTTCTATAAAACAGGTT  288

seq1  GTGTCAGCTTCACTATAGTGCTATAGAGCAGGTGATGCTCACCTGCCCCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGCTTCACTATAGTGCTATAGAGCAGGTGATGCTCACCTGCCCCC  338

seq1  TGCATTCAGGAATAC-TTTTCCCATATTCCCATATGTTATTCAGTATGAT  395
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGCATTCAGGAATACTTTTTCCCATATTCCCATATGTTATTCAGTATGAT  388

seq1  TTGACTATGGTTGTTCTATGTTTGGAACATTTAACATATTTAAATATTTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTATGGTTGTTCTATGTTTGGAACATTTAACATATTTAAATATTTC  438

seq1  TTTTTGCTGGGTCCTATTCTCACCTATCTAATTGCAAGCCATAGGGCTGC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCTGGGTCCTATTCTCACCTATCTAATTGCAAGCCATAGGGCTGC  488

seq1  TTCCACTTGGCCTTCCGGAAGTGAATGGACATTCGAGGGATCTGGTAAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTTGGCCTTCCGGAAGTGAATGGACATTCGAGGGATCTGGTAAAT  538

seq1  TTTCTAACTGACAAACTATGCTCTTGCATTTTTACTTACATTTAAAATTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAACTGACAAACTATGCTCTTGCATTTTTACTTACATTTAAAATTA  588

seq1  CAGAAGTTTTCCATTAAATTATTTTATTCTCTATATAAAAGCAAAAACAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTTTCCATTAAATTATTTTATTCTCTATATAAAAGCAAAAACAA  638

seq1  CAGGACTATTTGATTCACAGCAGGCCACCATCTGTCTCACTGCCGAAGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTATTTGATTCACAGCAGGCCACCATCTGTCTCACTGCCGAAGCA  688

seq1  GGGAAAAGGAAGCTTCAGCATTGAGAGGTCTCAAGATAGATCAAGATAGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAGGAAGCTTCAGCATTGAGAGGTCTCAAGATAGATCAAGATAGA  738

seq1  TCAACGTTGAAAACCAATTCAAAATGGAGATATTCAAACAACTGTTGTGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGTTGAAAACCAATTCAAAATGGAGATATTCAAACAACTGTTGTGT  788

seq1  TTGTATAACTTTCACCTTCTTAACAAGACAGCTTTGCATACAACATTATT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAACTTTCACCTTCTTAACAAGACAGCTTTGCATACAACATTATT  838

seq1  TAGGACTTAACCAAAGCGCGAAATGTTTCATATATATTCTTAGCAATTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTTAACCAAAGCGCGAAATGTTTCATATATATTCTTAGCAATTTA  888

seq1  ATAGGCAAGCAACATTTATTAATATTATATATATAAATGTATAACAAGAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAAGCAACATTTATTAATATTATATATATAAATGTATAACAAGAG  938

seq1  AAATTACAACAAATATAGTGATTTACACATTTTAATGTGAAACACCGAGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACAACAAATATAGTGATTTACACATTTTAATGTGAAACACCGAGA  988

seq1  AGAATGAGTGATAAAAATTTTCAGTGAATGTATTTATGCTGAATTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAGTGATAAAAATTTTCAGTGAATGTATTTATGCTGAATTC  1034