BAC Information

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BAC

Clone NameB6Ng01-057A19
Chromosome14 (Build37)
Map Location 82,733,437 - 82,843,559
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057A19.bB6Ng01-057A19.g
ACCDH879033DH879034
length9251,059
definitionDH879033|Mus musculus domesticus DNA, BAC clone: B6Ng01-057A19, 5' end.DH879034|Mus musculus domesticus DNA, BAC clone: B6Ng01-057A19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,733,437 - 82,733,736)(82,842,482 - 82,843,559)
sequence
gaattcagtaacaagtaactgacactacactgtcagtgtattcttttatt
tttatttttttggatactttcttcatttccatttcaaatgctatccaaaa
agtcccctacaccctcccccaaccctgctcccttaccaactcactcccac
ttcttggccctggcattcccctgtactggggcatataaagtttgcaatac
caagggacctctcatcccaatgatggccgactaggccatcttctgctgta
tatgtaactagagatacgagttctgggggtactgagaagttcatattgtt
gtttgtaatagctgagtagtcctccattgtgtaaatgtaccacattttct
gtatccatttctctgttgagggacatctgggttttttcaccttctggcta
ttataaatagggctgctatgaaaatagtggagcatgtgtccttattacca
gttggaacaacttctggctatatgcccaggagacgtattgctggatctac
aggtagtactatgtccagttttctgaggaaccaccagacggatttccaaa
gtggttgtacaagcttgcaatcctactagcaatggaggagggttcctctt
tctccacatccttgccagcatctgctgtcacctaaatttttgattctagc
cattctgactggtgtgaggtagaatctcagggtggttttaatttgcattt
ccctgatgattaaagatgttgaacatttaaatgttgatgataaagatgtt
gagaagtgcttctcatccctttggtattcctctcttccatctcttgtatt
ctgttgctgattctcacatctatggttcctgatttctttcctacgttttc
tatctccagagttgtctctcgttgggttttcttcattgtttctacttcca
ttttagatctttgatggtttgttaa
gaattcaccatagcaaaaatatttaatatttttatttcatgttgtaccat
aatttgaataaaatttctttagcacaatattatgcaatgtgttacagaga
taaccagttaaataaatcaaatgttgtgtttcatatgaataaatatatat
gatataaaacaatatagatgtagatttttgtgtggctgttttagacaaat
ttattgaagtctctacatttaattgatactgcatttgcataatgatcagt
ataaggcagccctgtgacagtcacacttttattaaatcaggccctacttc
tgtgcatgtgcactcgatacaaatatgaagaaagtaaaagaaaactggca
ttttaaaaacattttcatagtttttgaaatcatttcagaatacctattgg
aataattaatattttgctgaacaagaagaataaatgcaatcactgtctac
aaacagtggcaaagagcataccaggccatctccagagaacacataaaatt
taatgaaattcactattaaattcatgtgatacttgatatttttattaaca
ataagtagaatatttgtctgtgagtaaaagcatcattaattagaaaaaag
aaataaaattatagtttagaaaaagaagacactgcatcatatcagaaatg
gagaaacagataatatagagattgaatttagtaaaagtatataatgattt
tcttagtgcactaaatttactgaaaacaaaagtttctgatcaaatagatt
acagcagaatatgtgcaagctcttcaccaatacctaaaatgtccaatgaa
gtaagataacatgacttaattttgttgttgggccatagctttgagaaaga
tgccatgtcttttcagtctttgacattgctttaaagaaacactgaaagaa
tttgggaactttagagtataaagctcttgaacattgtatacagctaacgc
aatttctagtgaaagctcagagataagattatgaaagaaatcgagagtgt
aggctcagctcagggtgtttcaaggaaaatataagtctacagaactgtgt
gatagggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82733437_82733736
seq2: B6Ng01-057A19.b_33_332

seq1  GAATTCAGTAACAAGTAACTGACACTACACTGTCAGTGTATTCTTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAACAAGTAACTGACACTACACTGTCAGTGTATTCTTTTATT  50

seq1  TTTATTTTTTTGGATACTTTCTTCATTTCCATTTCAAATGCTATCCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTTTGGATACTTTCTTCATTTCCATTTCAAATGCTATCCAAAA  100

seq1  AGTCCCCTACACCCTCCCCCAACCCTGCTCCCTTACCAACTCACTCCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCTACACCCTCCCCCAACCCTGCTCCCTTACCAACTCACTCCCAC  150

seq1  TTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCAATAC  200

seq1  CAAGGGACCTCTCATCCCAATGATGGCCGACTAGGCCATCTTCTGCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGACCTCTCATCCCAATGATGGCCGACTAGGCCATCTTCTGCTGTA  250

seq1  TATGTAACTAGAGATACGAGTTCTGGGGGTACTGAGAAGTTCATATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAACTAGAGATACGAGTTCTGGGGGTACTGAGAAGTTCATATTGTT  300

seq1: chr14_82842482_82843559
seq2: B6Ng01-057A19.g_56_1114 (reverse)

seq1  ATCCCTTATACACACAGCTCCTGGTAGACTTATTATTTTCCTCTGAAACA  50
      ||||| ||| ||||||| ||   ||||||||| ||||||||| |||||||
seq2  ATCCC-TAT-CACACAGTTC--TGTAGACTTA-TATTTTCCT-TGAAACA  44

seq1  CCCTGAGCTGGGCCTACACTCTCTGTATTTCTCTCAATAATCTTATCTTC  100
      |||||||||| ||||||||||||   |||||| || ||||||||||| ||
seq2  CCCTGAGCTGAGCCTACACTCTC--GATTTCTTTC-ATAATCTTATC-TC  90

seq1  TGAGCTTTCACTAGAAATTGCTGTTAAGCTGTTATACAATGTTCAAGAGC  150
      ||||||||||||||||||||| ||| ||||| ||||||||||||||||||
seq2  TGAGCTTTCACTAGAAATTGC-GTT-AGCTG-TATACAATGTTCAAGAGC  137

seq1  TTTTATACTCTAAAGTT-CCAAATTCTTTCATGTGTTTTCTTTAAAGCAA  199
       |||||||||||||||| ||||||||||||| ||| ||||||||||||||
seq2  -TTTATACTCTAAAGTTCCCAAATTCTTTCA-GTG-TTTCTTTAAAGCAA  184

seq1  TTGTCAAAGACTGAAAAGTACATGGCCATCTTTCTCAAAGCTATGGCCCC  249
       ||||||||||||||||| |||||| |||||||||||||||||||| |||
seq2  -TGTCAAAGACTGAAAAG-ACATGG-CATCTTTCTCAAAGCTATGG-CCC  230

seq1  AACAACAAAATTAAGTCATGTTATCTTACTTCATTGGACATTTTAGGTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAAATTAAGTCATGTTATCTTACTTCATTGGACATTTTAGGTAT  280

seq1  TGGTGAAGAGCTTGCACATATTCTGCTGTAATCTATTTGATCAGAAACTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAGAGCTTGCACATATTCTGCTGTAATCTATTTGATCAGAAACTT  330

seq1  TTGTTTTCAGTAAATTTAGTGCACTAAGAAAATCATTATATACTTTTACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCAGTAAATTTAGTGCACTAAGAAAATCATTATATACTTTTACT  380

seq1  AAATTCAATCTCTATATTATCTGTTTCTCCATTTCTGATATGATGCAGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAATCTCTATATTATCTGTTTCTCCATTTCTGATATGATGCAGTG  430

seq1  TCTTCTTTTTCTAAACTATAATTTTATTTCTTTTTTCTAATTAATGATGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTTCTAAACTATAATTTTATTTCTTTTTTCTAATTAATGATGC  480

seq1  TTTTACTCACAGACAAATATTCTACTTATTGTTAATAAAAATATCAAGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTCACAGACAAATATTCTACTTATTGTTAATAAAAATATCAAGTA  530

seq1  TCACATGAATTTAATAGTGAATTTCATTAAATTTTATGTGTTCTCTGGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGAATTTAATAGTGAATTTCATTAAATTTTATGTGTTCTCTGGAG  580

seq1  ATGGCCTGGTATGCTCTTTGCCACTGTTTGTAGACAGTGATTGCATTTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTGGTATGCTCTTTGCCACTGTTTGTAGACAGTGATTGCATTTAT  630

seq1  TCTTCTTGTTCAGCAAAATATTAATTATTCCAATAGGTATTCTGAAATGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGTTCAGCAAAATATTAATTATTCCAATAGGTATTCTGAAATGA  680

seq1  TTTCAAAAACTATGAAAATGTTTTTAAAATGCCAGTTTTCTTTTACTTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAAACTATGAAAATGTTTTTAAAATGCCAGTTTTCTTTTACTTTC  730

seq1  TTCATATTTGTATCGAGTGCACATGCACAGAAGTAGGGCCTGATTTAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTGTATCGAGTGCACATGCACAGAAGTAGGGCCTGATTTAATA  780

seq1  AAAGTGTGACTGTCACAGGGCTGCCTTATACTGATCATTATGCAAATGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTGACTGTCACAGGGCTGCCTTATACTGATCATTATGCAAATGCA  830

seq1  GTATCAATTAAATGTAGAGACTTCAATAAATTTGTCTAAAACAGCCACAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAATTAAATGTAGAGACTTCAATAAATTTGTCTAAAACAGCCACAC  880

seq1  AAAAATCTACATCTATATTGTTTTATATCATATATATTTATTCATATGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTACATCTATATTGTTTTATATCATATATATTTATTCATATGAA  930

seq1  ACACAACATTTGATTTATTTAACTGGTTATCTCTGTAACACATTGCATAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACATTTGATTTATTTAACTGGTTATCTCTGTAACACATTGCATAA  980

seq1  TATTGTGCTAAAGAAATTTTATTCAAATTATGGTACAACATGAAATAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGCTAAAGAAATTTTATTCAAATTATGGTACAACATGAAATAAAA  1030

seq1  ATATTAAATATTTTTGCTATGGTGAATTC  1078
      |||||||||||||||||||||||||||||
seq2  ATATTAAATATTTTTGCTATGGTGAATTC  1059