BAC Information

Click to search

BAC

Clone NameB6Ng01-057G12
Chromosome14 (Build37)
Map Location 25,925,420 - 25,972,251
singlet/doubletdoublet
Overlap genenone
Upstream geneDlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24, LOC669315, LOC100039411
Downstream geneZmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057G12.bB6Ng01-057G12.g
ACCDH879284DH879285
length1,072999
definitionDH879284|Mus musculus domesticus DNA, BAC clone: B6Ng01-057G12, 5' end.DH879285|Mus musculus domesticus DNA, BAC clone: B6Ng01-057G12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,925,420 - 25,926,499)(25,971,247 - 25,972,251)
sequence
gaattctgtagccattggaaggcagaggagagcaggaaataggagtcagt
tgtgacaaggtacactctgcagatcattctactactgccaacttctaagc
cattcacggttaagcagtcccaccttgatgtgaggacgtgtccttggaag
ggttagttaacgctgcacccaaggcgctgttcttctctgacattcaaggc
tgctgcccaattttagctcaagggatgaggtcattagtagtagaatagag
taagtttgaaacaaagatgaaatagtccttccagatttcccaaacccaaa
gtgacagcacaccgttggtgaagtgtccgtgtctgtcagatgacggtaag
tgagcggatttgggggtccaaggaactcacggtcagcagaaaacagatcg
gtggacacagcaacacctagagtgtgagcaaagaaaaaaaattcacaagg
aaatcaaaggttttagaacaatggggactcaagccatgctgctgtcagat
gggggaccatgggagacctaggtgtcaggagagaagtgtgatcgaccaat
cgtaccaatgaatgtagattctagaaagctagaatggaaccactcatttg
tactatgagaagaggaaaagtcctcctccctctgctctggacagctgaac
cctcttctgcccaagggagaactctggaccaggcaggcaccacacccata
ggatgggtctgagcacctgatcttctgcactccagagagctttattatac
tttatgatataaccaaaggtgtgtagggaggtacaatgagcagcctgtac
ctagggggaatgccacagaacatcccagccaatgtcacaatcctgagcac
ttggccccaagttgtcatttccttagcatgtatggagactgcctgtatat
gatgtaggagtgcaggttaggccccgtgcatcatttccaagaactaacac
ggggtgccaaagttattattccagcacaggtcatctcaccaaggcctcta
gtacaagacatggactgatggtcctgaaacttctggaaagagtatcaatt
ttgtttttgtttactagaacca
gaattcaggcattgtgctatacagacttagagatacttactctgatgaaa
caccagactgagcgccgtaagagtggaagggggatgctgatcatttcctt
tatcatggcagccaggacacacagagagagactgcctgggctccacgctg
gttttcctctccttttccctttcattctatccaggactcccagcctctaa
catggtgctgcttgtattcagagcagatttctttctcttctctgtagttg
actgtgtctggaaaaccctcacagacatacccaggggtgtgctttcctga
tttcccaggtcattctctattcaatcaagttacaatcaggatcggcagtc
acgggtagatttattttagttataatgcttttgcacagttagttgggtat
ggtgggcacatgattgctacgtgtactgggagatcagagcatccctgtgg
cttattgtgttgggacatgtgctttaatgctgtgctgtgcaaaggcagag
tgttaactctgagcactgtcagtagtcttcattgctgtaaaatacatgaa
gaatcgtgaagacagggtgcctggattagcttaggaaggagccttggttt
gggttccatgcatcgagctaatcaccactgcagggcaatgttgtgctctg
acgcatccattcccagatctgggtctagggccagctgcacctgataccag
aactgggtgttagcaggtttccccaggaatgcctagggctacaaaaagaa
agggaatgcttgctgagtttcagaaagcagtctccagaagagcttctgga
ttagaggatgcctgccctagaacagtaacttcatacatctttgtctttaa
aatctggcatctgtggcatgtttatttacatgcctatttttctcagatgt
ccttaatggtggtgacccaaagagtcattcttcttttcttccctaagtag
aacccaacttggagagatcaagatcatgctgcaggaagatggtcctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_25925420_25926499
seq2: B6Ng01-057G12.b_48_1119

seq1  GAATTCTGTAGCCATTGGAAGGCAGAGGAGAGCAGGAAATAGGAGTCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGCCATTGGAAGGCAGAGGAGAGCAGGAAATAGGAGTCAGT  50

seq1  TGTGACAAGGTACACTCTGCAGATCATTCTACTACTGCCAACTTCTAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAAGGTACACTCTGCAGATCATTCTACTACTGCCAACTTCTAAGC  100

seq1  CATTCACGGTTAAGCAGTCCCACCTTGATGTGAGGACGTGTCCTTGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACGGTTAAGCAGTCCCACCTTGATGTGAGGACGTGTCCTTGGAAG  150

seq1  GGTTAGTTAACGCTGCACCCAAGGCGCTGTTCTTCTCTGACATTCAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGTTAACGCTGCACCCAAGGCGCTGTTCTTCTCTGACATTCAAGGC  200

seq1  TGCTGCCCAATTTTAGCTCAAGGGATGAGGTCATTAGTAGTAGAATAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCCAATTTTAGCTCAAGGGATGAGGTCATTAGTAGTAGAATAGAG  250

seq1  TAAGTTTGAAACAAAGATGAAATAGTCCTTCCAGATTTCCCAAACCCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTGAAACAAAGATGAAATAGTCCTTCCAGATTTCCCAAACCCAAA  300

seq1  GTGACAGCACACCGTTGGTGAAGTGTCCGTGTCTGTCAGATGACGGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCACACCGTTGGTGAAGTGTCCGTGTCTGTCAGATGACGGTAAG  350

seq1  TGAGCGGATTTGGGGGTCCAAGGAACTCACGGTCAGCAGAAAACAGATCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGGATTTGGGGGTCCAAGGAACTCACGGTCAGCAGAAAACAGATCG  400

seq1  GTGGACACAGCAACACCTAGAGTGTGAGCAAAGAAAAAAAATTCACAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACACAGCAACACCTAGAGTGTGAGCAAAGAAAAAAAATTCACAAGG  450

seq1  AAATCAAAGGTTTTAGAACAATGGGGACTCAAGCCATGCTGCTGTCAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAAGGTTTTAGAACAATGGGGACTCAAGCCATGCTGCTGTCAGAT  500

seq1  GGGGGACCATGGGAGACCTAGGTGTCAGGAGAGAAGTGTGATCGACCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGACCATGGGAGACCTAGGTGTCAGGAGAGAAGTGTGATCGACCAAT  550

seq1  CGTACCAATGAATGTAGATTCTAGAAAGCTAGAATGGAACCACTCATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACCAATGAATGTAGATTCTAGAAAGCTAGAATGGAACCACTCATTTG  600

seq1  TACTATGAGAAGAGGAAAAGTCCTCCTCCCTCTGCTCTGGACAGCTGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGAGAAGAGGAAAAGTCCTCCTCCCTCTGCTCTGGACAGCTGAAC  650

seq1  CCTCTTCTGCCCAAGGGAGAACTCTGGACCAGGCAGGCACCACACCCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTGCCCAAGGGAGAACTCTGGACCAGGCAGGCACCACACCCATA  700

seq1  GGATGGGTCTGAGCACCTGATCTTCTGCACTCCAGAGAGCTTTATTATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGTCTGAGCACCTGATCTTCTGCACTCCAGAGAGCTTTATTATAC  750

seq1  TTTATGATATAACCAAAGGTGTGTAGGGAGGTACAATGAGCAGCCTGTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGATATAACCAAAGGTGTGTAGGGAGGTACAATGAGCAGCCTGTAC  800

seq1  CTAGGGGGAATGCCACAGAACATCCCAGCCAATGTCACAATCCTGAGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGGGAATGCCACAGAACATCCCAGCCAATGTCACAATCCTGAGCAC  850

seq1  TTGGCCCCAAGTTGTCATTTCCTTAGCATGTATGGAGACTGCCTGTATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCCCAAGTTGTCATTTCCTTAGCATGTATGGAGACTGCCTGTATAT  900

seq1  GATGTAGGAGTGCAGGTTAGGCCCCGTGCATCATTTCCAAGAACTTACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GATGTAGGAGTGCAGGTTAGGCCCCGTGCATCATTTCCAAGAACTAACAC  950

seq1  GGAGTGCCAAAGTTATTA-TCCAGCCACAGGTCATCCACACAAGGGCCTC  999
      || ||||||||||||||| ||||| |||||||||| | ||| | ||||||
seq2  GGGGTGCCAAAGTTATTATTCCAG-CACAGGTCAT-CTCACCAAGGCCTC  998

seq1  TAGTACAGAACATGAACTGATGGTCCCTGGAAACTTCTGGAAAGGTGTTA  1049
      |||||||  ||||| |||||||||||   |||||||||||||||    ||
seq2  TAGTACAAGACATGGACTGATGGTCC--TGAAACTTCTGGAAAG--AGTA  1044

seq1  TCAATTTTGGTTTTTTGTTTAACTAGAACCA  1080
      |||||||||  ||||||||| ||||||||||
seq2  TCAATTTTG--TTTTTGTTT-ACTAGAACCA  1072

seq1: chr14_25971247_25972251
seq2: B6Ng01-057G12.g_67_1065 (reverse)

seq1  CCCAGGAACCATCTGTCCTGCAGCATGGATCTCTGGATCTCTCCAAGTTG  50
      |||||| ||||||| ||||||||||||    ||| |||||||||||||||
seq2  CCCAGG-ACCATCT-TCCTGCAGCATG---ATCTTGATCTCTCCAAGTTG  45

seq1  GGTTCTACTTAAGGGAAG-AAAGGAGAATGACTCTTTGGGTCACCATCAT  99
      |||||||||| ||||||| |||| |||||||||||||||||||||| |||
seq2  GGTTCTACTT-AGGGAAGAAAAGAAGAATGACTCTTTGGGTCACCACCAT  94

seq1  TAAGGACATCTGAGAAAAATAGGCATGTAAATAAACATGCCACAGATGCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACATCTGAGAAAAATAGGCATGTAAATAAACATGCCACAGATGCC  144

seq1  AGATTTTTAAAGACAAAGATGTATGAAGTTACTGTTCTAGGGCAGGCATC  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGA-TTTTAAAGACAAAGATGTATGAAGTTACTGTTCTAGGGCAGGCATC  193

seq1  CTCTAATCCAGAAGCTCTTCTGGAGACTGCTTTCTGAAACTCAGCAAGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATCCAGAAGCTCTTCTGGAGACTGCTTTCTGAAACTCAGCAAGCA  243

seq1  TTCCCTTTCTTTTTGTAGCCCTAGGCATTCCTGGGGAAACCTGCTAACAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTCTTTTTGTAGCCCTAGGCATTCCTGGGGAAACCTGCTAACAC  293

seq1  CCAGTTCTGGTATCAGGTGCAGCTGGCCCTAGACCCAGATCTGGGAATGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTGGTATCAGGTGCAGCTGGCCCTAGACCCAGATCTGGGAATGG  343

seq1  ATGCGTCAGAGCACAACATTGCCCTGCAGTGGTGATTAGCTCGATGCATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTCAGAGCACAACATTGCCCTGCAGTGGTGATTAGCTCGATGCATG  393

seq1  GAACCCAAACCAAGGCTCCTTCCTAAGCTAATCCAGGCACCCTGTCTTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAAACCAAGGCTCCTTCCTAAGCTAATCCAGGCACCCTGTCTTCA  443

seq1  CGATTCTTCATGTATTTTACAGCAATGAAGACTACTGACAGTGCTCAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTCTTCATGTATTTTACAGCAATGAAGACTACTGACAGTGCTCAGAG  493

seq1  TTAACACTCTGCCTTTGCACAGCACAGCATTAAAGCACATGTCCCAACAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACTCTGCCTTTGCACAGCACAGCATTAAAGCACATGTCCCAACAC  543

seq1  AATAAGCCACAGGGATGCTCTGATCTCCCAGTACACGTAGCAATCATGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCCACAGGGATGCTCTGATCTCCCAGTACACGTAGCAATCATGTG  593

seq1  CCCACCATACCCAACTAACTGTGCAAAAGCATTATAACTAAAATAAATCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCATACCCAACTAACTGTGCAAAAGCATTATAACTAAAATAAATCT  643

seq1  ACCCGTGACTGCCGATCCTGATTGTAACTTGATTGAATAGAGAATGACCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGTGACTGCCGATCCTGATTGTAACTTGATTGAATAGAGAATGACCT  693

seq1  GGGAAATCAGGAAAGCACACCCCTGGGTATGTCTGTGAGGGTTTTCCAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATCAGGAAAGCACACCCCTGGGTATGTCTGTGAGGGTTTTCCAGA  743

seq1  CACAGTCAACTACAGAGAAGAGAAAGAAATCTGCTCTGAATACAAGCAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCAACTACAGAGAAGAGAAAGAAATCTGCTCTGAATACAAGCAGC  793

seq1  ACCATGTTAGAGGCTGGGAGTCCTGGATAGAATGAAAGGGAAAAGGAGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTTAGAGGCTGGGAGTCCTGGATAGAATGAAAGGGAAAAGGAGAG  843

seq1  GAAAACCAGCGTGGAGCCCAGGCAGTCTCTCTCTGTGTGTCCTGGCTGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCAGCGTGGAGCCCAGGCAGTCTCTCTCTGTGTGTCCTGGCTGCC  893

seq1  ATGATAAAGGAAATGATCAGCATCCCCCTTCCACTCTTACGGCGCTCAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAAGGAAATGATCAGCATCCCCCTTCCACTCTTACGGCGCTCAGT  943

seq1  CTGGTGTTTCATCAGAGTAAGTATCTCTAAGTCTGTATAGCACAATGCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTTTCATCAGAGTAAGTATCTCTAAGTCTGTATAGCACAATGCCT  993

seq1  GAATTC  1005
      ||||||
seq2  GAATTC  999