BAC Information

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BAC

Clone NameB6Ng01-057K10
Chromosome14 (Build37)2 (Build37)
Map Location 106,550,382 - 106,551,41576,226,604 - 76,226,636
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneRbm26, LOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52
Downstream geneLOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057K10.bB6Ng01-057K10.g
ACCDH879458DH879459
length1,027910
definitionDH879458|Mus musculus domesticus DNA, BAC clone: B6Ng01-057K10, 5' end.DH879459|Mus musculus domesticus DNA, BAC clone: B6Ng01-057K10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(106,550,382 - 106,551,415)(76,226,604 - 76,226,636)
sequence
gaattcaatatctgaggtgagactgataattaaatgaagtaaaaagtaat
gctttgagtgaataaaatgctgaatttaaatatctctgcccttggtaaat
ttagtgagaaatttcttagtgttgtcatcacactttaggttttaactctg
gaaaaccgagtgcacttggaattaggccactgctcagttttgtgcttcta
ggttttgtaaattggagcacatattgaatttcagagttcccaagccaaaa
atatataaaaaactacatatgctcttttctagtgaaaaaacaaagtgatc
tccagtggagagggactccctcttccgaatttttctgcaaaatgagttat
ttatatatgagctcagaaccactgccaaaaaggtggtcataatgtattct
gtcaatattttttcttttgttaagattattgttatgcttaaaggaacata
aattgtgtttattgcctttaagtattcatgcagattcatattaacatctt
catgttttgttgtcataatttatagattggaattatgagcttctataata
tatggtcaaccagttcactccgtaaatataaactagagtcagccaagcca
tcagaatgaagatagccgagtcaaggtaggttgttttgaaagtagactag
ctgctagcagatgagagttgtgttcttttagaaaaggacagattacctct
aggataattacagtagtctaattacatcatcaagcagtttttttttcctg
tactattatagaggcatctaaattgaagatttgtggactgaatatctgtg
cctgttcaagttctttattattctcacaagtttatatgatcttatgacaa
gtttataaacagaaattcaaaattattaggtattacattggctgcctgca
ggataatgtgagaaaactaataacatcaggaaagatttcttttagatatg
tattttttgtcagattgagtagtctatttatgagaagtcatgtaagatta
ggaaattgccatctgattatttttttg
gaattctcacttgaggaatactgaaaaaatgttcaacatccttaatcatc
agagaaatgcaaatcaaaacaaccctgaaattccatctcacaccagtcag
aatggctaagatcaaatattcaggtgacagcagatgctggcaaggatgtg
gacaaagaggaacactcctccattgttggtgggattgcaggcttgtacaa
ccactctggaaatcagtctggtggttcctcagaaaattggacatagtact
atcagaggatcctgtaatacctgttctgggcatatatccagaagatgttc
cagccggtaagaaggacacatggtccactatgttcatagcagccttattt
ataatagccagaagctggaaagaacccagatgcccctcaacagaggaatg
gatacagaaaatgtggtacatttacacaatggaatactactcagctatta
aaaagaatgaatttatgaaattcctaggcaaatggatggacctggagggc
atcatcctgagtgagataaccctatcacaaaaaactcacatgatatgtac
tcactgataagtggatattagtccagaaacttagaatacccaagatacaa
gttgccaaacacatgaaactcaagaagaatgaagaccaaagtgtgatcac
tttgccccttcttagaattgggaataaaacacccatagaaggagttacag
agacaaagtttagagctcagacaaaaggatggacatctagagactgctgc
acctggggatccatcccatattcagccttcaaacacagacaccattgcat
atactagcaagattttgctgaaaggaccctgatatagctgtctcttgtga
ggctaatgcagtgcctgacaaacacagaagtggatgctcacagtcagcta
tgaatggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106550382_106551415
seq2: B6Ng01-057K10.b_46_1072

seq1  GAATTCAATATCTGAGGTGAGACTGATAATTAAATGAAGTAAAAAGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATCTGAGGTGAGACTGATAATTAAATGAAGTAAAAAGTAAT  50

seq1  GCTTTGAGTGAATAAAATGCTGAATTTAAATATCTCTGCCCTTGGTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAGTGAATAAAATGCTGAATTTAAATATCTCTGCCCTTGGTAAAT  100

seq1  TTAGTGAGAAATTTCTTAGTGTTGTCATCACACTTTAGGTTTTAACTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGAGAAATTTCTTAGTGTTGTCATCACACTTTAGGTTTTAACTCTG  150

seq1  GAAAACCGAGTGCACTTGGAATTAGGCCACTGCTCAGTTTTGTGCTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCGAGTGCACTTGGAATTAGGCCACTGCTCAGTTTTGTGCTTCTA  200

seq1  GGTTTTGTAAATTGGAGCACATATTGAATTTCAGAGTTCCCAAGCCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTAAATTGGAGCACATATTGAATTTCAGAGTTCCCAAGCCAAAA  250

seq1  ATATATAAAAAACTACATATGCTCTTTTCTAGTGAAAAAACAAAGTGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAAAAACTACATATGCTCTTTTCTAGTGAAAAAACAAAGTGATC  300

seq1  TCCAGTGGAGAGGGACTCCCTCTTCCGAATTTTTCTGCAAAATGAGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGGAGAGGGACTCCCTCTTCCGAATTTTTCTGCAAAATGAGTTAT  350

seq1  TTATATATGAGCTCAGAACCACTGCCAAAAAGGTGGTCATAATGTATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATGAGCTCAGAACCACTGCCAAAAAGGTGGTCATAATGTATTCT  400

seq1  GTCAATATTTTTTCTTTTGTTAAGATTATTGTTATGCTTAAAGGAACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATATTTTTTCTTTTGTTAAGATTATTGTTATGCTTAAAGGAACATA  450

seq1  AATTGTGTTTATTGCCTTTAAGTATTCATGCAGATTCATATTAACATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGTTTATTGCCTTTAAGTATTCATGCAGATTCATATTAACATCTT  500

seq1  CATGTTTTGTTGTCATAATTTATAGATTGGAATTATGAGCTTCTATAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTGTTGTCATAATTTATAGATTGGAATTATGAGCTTCTATAATA  550

seq1  TATGGTCAACCAGTTCACTCCGTAAATATAAACTAGAGTCAGCCAAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCAACCAGTTCACTCCGTAAATATAAACTAGAGTCAGCCAAGCCA  600

seq1  TCAGAATGAAGATAGCCGAGTCAAGGTAGGTTGTTTTGAAAGTAGACTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATGAAGATAGCCGAGTCAAGGTAGGTTGTTTTGAAAGTAGACTAG  650

seq1  CTGCTAGCAGATGAGAGTTGTGTTCTTTTAGAAAAGGACAGATTACCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGCAGATGAGAGTTGTGTTCTTTTAGAAAAGGACAGATTACCTCT  700

seq1  AGGATAATTACAGTAGTCTAATTACATCATCAAGCAGTTTTTTTTTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAATTACAGTAGTCTAATTACATCATCAAGCAGTTTTTTTTTCCTG  750

seq1  TACTATTATAGAGGCATCTAAATTGAAGATTTGTGGACTGAATATCTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTATAGAGGCATCTAAATTGAAGATTTGTGGACTGAATATCTGTG  800

seq1  CCTGTTCAAGTTCTTTATTATTCTCACAAGTTTATATGATCTTATGACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCAAGTTCTTTATTATTCTCACAAGTTTATATGATCTTATGACAA  850

seq1  GTTTATAAACAGAAAATTCAAAATTATTAGGTATTACATTGGCTGCCTGC  900
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTTTATAAACAG-AAATTCAAAATTATTAGGTATTACATTGGCTGCCTGC  899

seq1  AGGATAATGTGAGAAAACTTAAATACAATCAGGAAAGATTTCCTTTTAGA  950
      |||||||||||||||||||  ||||  |||||||||||||| ||||||||
seq2  AGGATAATGTGAGAAAACT--AATAACATCAGGAAAGATTT-CTTTTAGA  946

seq1  TATGTTATTTTTGTCAAGAATGAAGTAGTCTATTTATGAGAAGTCAGTGT  1000
      |||||  |||||||| ||| || ||||||||||||||||||||||| |||
seq2  TATGTATTTTTTGTC-AGATTG-AGTAGTCTATTTATGAGAAGTCA-TGT  993

seq1  AAGAATAGGAAATTGCCATCTGATTATTTTTTTG  1034
      |||| |||||||||||||||||||||||||||||
seq2  AAGATTAGGAAATTGCCATCTGATTATTTTTTTG  1027

seq1: chr2_76226604_76226636
seq2: B6Ng01-057K10.g_937_969 (reverse)

seq1  ATAGCTGACTGTGAGCATCCACTTCTGTGTTTG  33
      |||||||||||||||||||||||||||||||||
seq2  ATAGCTGACTGTGAGCATCCACTTCTGTGTTTG  33