BAC Information

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BAC

Clone NameB6Ng01-059H11
Chromosome14 (Build37)
Map Location 100,201,918 - 100,202,791
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672
Downstream geneEG546623, Klf12, LOC100043413, EG668683, EG668684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059H11.bB6Ng01-059H11.g
ACCDH880743DH880744
length877490
definitionDH880743|Mus musculus domesticus DNA, BAC clone: B6Ng01-059H11, 5' end.DH880744|Mus musculus domesticus DNA, BAC clone: B6Ng01-059H11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaccagacttttaaagaaatgttagtgacaatactcctcacaat
attccacaaaacagaaaaagaaggaccattcacttatgaggccacagaaa
cactgacagcctaaccacatagagaagcaacaaagaaggagaggctgctc
tcagagattcagttaacccggatgccctaatctgcatagcaaggataata
gcgccctgctcatggtggttgtaaggatccagagagatgttgtctttagg
gttgaaagtgagatacgtactaacagagctattattacagaatatgacct
cagcagtccttaattatgggtgaagatgaaagtcatggataaattaagtc
atgagttattagtgtgactatgcgtttaaaatatctctccttattaaatc
tttaatgatagtaacaagtgtccagattggtgtaggtcaaggtttttaat
cacttaattctgtaagtttatatgtatttgttgattgtacagtttgtccc
tagtacctttgaagttagggttgaagtcaggaggaacaaagatgaagctc
agaatcttaacatatgaacaaaccgaatatcaattttattaggaaacctt
atttcagattaaaagtctttctttttgtctttatctttccttccttcctt
cttttttttctttcaattttgacacatgttcttactgttgacgaagttga
cttggaattcactgggcagcacaagcaagccatgattctcagtcttccaa
ccttaacctctggagttgaagggatttttcagagctacaagaccttcttc
tttaaaagcctggtcaaatagtttttcattgtggcgcacaccctttaatc
ccagtactcggggaggcaggaggcagg

ctcaaaaagatgaaaatagattcaccacaaaatccagctatgttgccctt
gggtatatgcccaaaagtctctacatctttctacagaaagacttgttcat
tactgttccattcatcacagccagaaattgggaactgcctaggtgaatca
ataatgaaagggtggtacatttacacagtggactattatgtagcttttaa
gaaaaatgaaattatgaaattctcaagtacgtggatggagctggaaacaa
tcattctgcgtgagggaacttagaccagatatatatatatatatgcaagt
tctttcctacgggtggatgttagtgttgagtcagtgcttcactttggaca
tctacataggttaggtagatcacagggaccactggggagcaaggaggaca
tcaacccaagaaaaggaaataagaatatggtgctataaagggatgtatag
tttaggagaataggaggattaattcaggggtggtggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100201918_100202791
seq2: B6Ng01-059H11.b_47_923

seq1  GAATTCTACCAGACTTTTAAAGAAATGTTAGTGACAATACTCCTCACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCAGACTTTTAAAGAAATGTTAGTGACAATACTCCTCACAAT  50

seq1  ATTCCACAAAACAGAAAAAGAAGGACCATTCACTTATGAGGCCACAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACAAAACAGAAAAAGAAGGACCATTCACTTATGAGGCCACAGAAA  100

seq1  CACTGACAGCCTAACCACATAGAGAAGCAACAAAGAAGGAGAGGCTGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACAGCCTAACCACATAGAGAAGCAACAAAGAAGGAGAGGCTGCTC  150

seq1  TCAGAGATTCAGTTAACCCGGATGCCCTAATCTGCATAGCAAGGATAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATTCAGTTAACCCGGATGCCCTAATCTGCATAGCAAGGATAATA  200

seq1  GCGCCCTGCTCATGGTGGTTGTAAGGATCCAGAGAGATGTTGTCTTTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCCTGCTCATGGTGGTTGTAAGGATCCAGAGAGATGTTGTCTTTAGG  250

seq1  GTTGAAAGTGAGATACGTACTAACAGAGCTATTATTACAGAATATGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAAGTGAGATACGTACTAACAGAGCTATTATTACAGAATATGACCT  300

seq1  CAGCAGTCCTTAATTATGGGTGAAGATGAAAGTCATGGATAAATTAAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTCCTTAATTATGGGTGAAGATGAAAGTCATGGATAAATTAAGTC  350

seq1  ATGAGTTATTAGTGTGACTATGCGTTTAAAATATCTCTCCTTATTAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTATTAGTGTGACTATGCGTTTAAAATATCTCTCCTTATTAAATC  400

seq1  TTTAATGATAGTAACAAGTGTCCAGATTGGTGTAGGTCAAGGTTTTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGATAGTAACAAGTGTCCAGATTGGTGTAGGTCAAGGTTTTTAAT  450

seq1  CACTTAATTCTGTAAGTTTATATGTATTTGTTGATTGTACAGTTTGTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAATTCTGTAAGTTTATATGTATTTGTTGATTGTACAGTTTGTCCC  500

seq1  TAGTACCTTTGAAGTTAGGGTTGAAGTCAGGAGGAACAAAGATGAAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACCTTTGAAGTTAGGGTTGAAGTCAGGAGGAACAAAGATGAAGCTC  550

seq1  AGAATCTTAACATATGAACAAACCGAATATCAATTTTATTAGGAAACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTTAACATATGAACAAACCGAATATCAATTTTATTAGGAAACCTT  600

seq1  ATTTCAGATTAAAAGTCTTTCTTTTTGTCTTTATCTTTCCTTCCTTCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGATTAAAAGTCTTTCTTTTTGTCTTTATCTTTCCTTCCTTCCTT  650

seq1  CTTTTTTTTCTTTCAATTTTGACACATGTTCTTACTGTTGACGAAGTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTCTTTCAATTTTGACACATGTTCTTACTGTTGACGAAGTTGA  700

seq1  CTTGGAATTCACTGGGCAGCACAAGCAAGCCATGATTCTCAGTCTTCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAATTCACTGGGCAGCACAAGCAAGCCATGATTCTCAGTCTTCCAA  750

seq1  CCTTAACCTCTGGAGTTGAAGGGATTTTTCAGAGCTACAAGACCTTCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACCTCTGGAGTTGAAGGGATTTTTCAGAGCTACAAGACCTTCTTC  800

seq1  TTTAAAAGCCTGGTCAAATAGTTTTTCATTGTGGCGCACA-CCTTTAATC  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTAAAAGCCTGGTCAAATAGTTTTTCATTGTGGCGCACACCCTTTAATC  850

seq1  CCAGTACTC-GGGAGGCA-GAGGCAGG  874
      ||||||||| |||||||| ||||||||
seq2  CCAGTACTCGGGGAGGCAGGAGGCAGG  877


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