BAC Information

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BAC

Clone NameB6Ng01-059M10
Chromosome14 (Build37)
Map Location 98,209,763 - 98,364,228
singlet/doubletdoublet
Overlap geneDach1
Upstream geneLOC668654, EG668659
Downstream geneLOC635593, LOC619716
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059M10.bB6Ng01-059M10.g
ACCDH880951DH880952
length222967
definitionDH880951|Mus musculus domesticus DNA, BAC clone: B6Ng01-059M10, 5' end.DH880952|Mus musculus domesticus DNA, BAC clone: B6Ng01-059M10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,209,763 - 98,210,146)(98,363,256 - 98,364,228)
sequence
ttggagagaaataagactttaaatcattgtataaaagtagtaaattcttt
aaactattgcatataacttcttttaattctgctaattttgaatatttagg
aatgttttttgtttaaaatcatatcatattcctttatttgtggatatgaa
tatgtgtattgggggataggtaggggtgtgctactgtgtgtgcatgtgac
ggtccctgtgcttgtgtgtgtg
gaattcattctctcaacattttatttaaggaaaacactatgtacacagtt
tagaaaattcacagaggattcaagagggacttttgccagtggctaatatc
tgactcataggactggtaaacagctatcaacaatagtagatttctggctt
cataggaaatgagttcatatctattcaaaatgtgatctcaaaacagatgt
cccaagaaaatctcattgtttaaactatagtcataaccccctagctgctg
ttattacttcaaggaagtgaagtcatctcacgacttcaatactgtgtctt
tctccactccatagcatatgggcaggcctgtgctcgttcagcaaatggca
aagctgaacaaatgtcacttgtataaaatacttggtttttttttccaaat
tgttctccaatttgacatagttaacaggatgcaggactttcaagcaaaag
taagggcatgagttgagttgggaatgcattcttcattctttctaacgtgt
tcttttcctgtcctgccaccaacaaaacacatttattaagaggacaaaaa
gaccaagcacagtgggagacaaaatatattccctagttgaccattccctt
accttgaaacaagaaaagtagccttaaaggatatcttgctgatatagaat
gactcgcacacaagtgactttctaggacagaagtttattttgagggaaaa
agaatgattttatgatttaagaaaaaaaatcttggagcactcgagacagc
aaataaaaggaaactgagagccaggccgccatgcagagctctgcagttgc
acattggatcctgccttggcaatgttaatgaacctcaaatccttcctata
attagatgagggaattgcttatattttcaaacagatgatgctgctataat
gaaacgattgacagggatttagagtgtctacagtagtcatttggttctgt
ataaaaaaagtttaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_98209763_98210146
seq2: B6Ng01-059M10.b_51_272

seq1  TTGGAGAGAAATAAGACTTTAAATCATTGTATAAAAGTAGTAAATTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAGAAATAAGACTTTAAATCATTGTATAAAAGTAGTAAATTCTTT  50

seq1  AAACTATTGCATATAACTTCTTTTAATTCTGCTAATTTTGAATATTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTGCATATAACTTCTTTTAATTCTGCTAATTTTGAATATTTAGG  100

seq1  AATGTTTTTTGTTTAAAATCATATCATATTCCTTTATTTGTGGATATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTTTGTTTAAAATCATATCATATTCCTTTATTTGTGGATATGAA  150

seq1  TATGTGTATTGGGGGATAGGTAGGGGTGTGCTAGTGTGTGTGCATGTGCC  200
      ||||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  TATGTGTATTGGGGGATAGGTAGGGGTGTGCTACTGTGTGTGCATGTGAC  200

seq1  TGTACCTGTGCATGTGTGTGTGTGTGTGTATGAGAAGGAGAGAGAGAGAG  250
       || ||||||| ||||||||||                            
seq2  GGTCCCTGTGCTTGTGTGTGTG----------------------------  222

seq1  AGACACACAGAGAGAGACAGAGAAAGAGAGACAGAGAAAGAGAGACAGAG  300
                                                        
seq2  --------------------------------------------------  222

seq1  AAAGAGAGACAGAGAAAGAGAGAGAGAAAGAGAGAGAGGTATGTAGGTAT  350
                                                        
seq2  --------------------------------------------------  222

seq1  ATCTGGGAGGGAAGTGTTTGTGCTTGTGTGTGTG  384
                                        
seq2  ----------------------------------  222

seq1: chr14_98363256_98364228
seq2: B6Ng01-059M10.g_68_1034 (reverse)

seq1  TTTTAAACTTTTTTTTTATAACAGAAACCAAATGACTACTGTAGACACTC  50
      ||||||||||||||| |   |||| |||||||||||||||||||||||||
seq2  TTTTAAACTTTTTTTAT---ACAG-AACCAAATGACTACTGTAGACACTC  46

seq1  TTAAATTCCCTGTCAATCGTTTCATTATAGCAGCATCATCTGTTTGAAAA  100
      |  || ||||||||||||||||||||||||||||||||||||||||||||
seq2  T--AAATCCCTGTCAATCGTTTCATTATAGCAGCATCATCTGTTTGAAAA  94

seq1  TATAAGCAATTCCCTCATCTAATTATAGGAAGGATTTGAGGTTCATTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCAATTCCCTCATCTAATTATAGGAAGGATTTGAGGTTCATTAAC  144

seq1  ATTGCCAAGGCAGGATCCAATGTGCAACTGCAGAGCTCTGCATGGCGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCAAGGCAGGATCCAATGTGCAACTGCAGAGCTCTGCATGGCGGCC  194

seq1  TGGCTCTCAGTTTCCTTTTATTTGCTGTCTCGAGTGCTCCAAGATTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTCAGTTTCCTTTTATTTGCTGTCTCGAGTGCTCCAAGATTTTTT  244

seq1  TTCTTAAATCATAAAATCATTCTTTTTCCCTCAAAATAAACTTCTGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAATCATAAAATCATTCTTTTTCCCTCAAAATAAACTTCTGTCCT  294

seq1  AGAAAGTCACTTGTGTGCGAGTCATTCTATATCAGCAAGATATCCTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTCACTTGTGTGCGAGTCATTCTATATCAGCAAGATATCCTTTAA  344

seq1  GGCTACTTTTCTTGTTTCAAGGTAAGGGAATGGTCAACTAGGGAATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTTTTCTTGTTTCAAGGTAAGGGAATGGTCAACTAGGGAATATAT  394

seq1  TTTGTCTCCCACTGTGCTTGGTCTTTTTGTCCTCTTAATAAATGTGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTCCCACTGTGCTTGGTCTTTTTGTCCTCTTAATAAATGTGTTTT  444

seq1  GTTGGTGGCAGGACAGGAAAAGAACACGTTAGAAAGAATGAAGAATGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGGCAGGACAGGAAAAGAACACGTTAGAAAGAATGAAGAATGCAT  494

seq1  TCCCAACTCAACTCATGCCCTTACTTTTGCTTGAAAGTCCTGCATCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACTCAACTCATGCCCTTACTTTTGCTTGAAAGTCCTGCATCCTGT  544

seq1  TAACTATGTCAAATTGGAGAACAATTTGGAAAAAAAAACCAAGTATTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATGTCAAATTGGAGAACAATTTGGAAAAAAAAACCAAGTATTTTA  594

seq1  TACAAGTGACATTTGTTCAGCTTTGCCATTTGCTGAACGAGCACAGGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTGACATTTGTTCAGCTTTGCCATTTGCTGAACGAGCACAGGCCT  644

seq1  GCCCATATGCTATGGAGTGGAGAAAGACACAGTATTGAAGTCGTGAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATATGCTATGGAGTGGAGAAAGACACAGTATTGAAGTCGTGAGATG  694

seq1  ACTTCACTTCCTTGAAGTAATAACAGCAGCTAGGGGGTTATGACTATAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACTTCCTTGAAGTAATAACAGCAGCTAGGGGGTTATGACTATAGT  744

seq1  TTAAACAATGAGATTTTCTTGGGACATCTGTTTTGAGATCACATTTTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAATGAGATTTTCTTGGGACATCTGTTTTGAGATCACATTTTGAA  794

seq1  TAGATATGAACTCATTTCCTATGAAGCCAGAAATCTACTATTGTTGATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATGAACTCATTTCCTATGAAGCCAGAAATCTACTATTGTTGATAG  844

seq1  CTGTTTACCAGTCCTATGAGTCAGATATTAGCCACTGGCAAAAGTCCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTACCAGTCCTATGAGTCAGATATTAGCCACTGGCAAAAGTCCCTC  894

seq1  TTGAATCCTCTGTGAATTTTCTAAACTGTGTACATAGTGTTTTCCTTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCCTCTGTGAATTTTCTAAACTGTGTACATAGTGTTTTCCTTAAA  944

seq1  TAAAATGTTGAGAGAATGAATTC  973
      |||||||||||||||||||||||
seq2  TAAAATGTTGAGAGAATGAATTC  967