BAC Information

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BAC

Clone NameB6Ng01-060J10
Chromosome14 (Build37)
Map Location 77,116,813 - 77,282,485
singlet/doubletdoublet
Overlap geneLOC100043753
Upstream geneCog3, Slc25a30, LOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik, Tsc22d1, 2810032E02Rik
Downstream geneLOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678, Gm1587, Dnajc15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060J10.bB6Ng01-060J10.g
ACCDH881523DH881524
length339940
definitionDH881523|Mus musculus domesticus DNA, BAC clone: B6Ng01-060J10, 5' end.DH881524|Mus musculus domesticus DNA, BAC clone: B6Ng01-060J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,282,147 - 77,282,485)(77,116,813 - 77,117,759)
sequence
ttaccatgaagcacaagttgatttagggagcaaaccagggacggaggaac
tagaacattcacttagaatatacttttcttcttcatttcttcttttcagc
ccctcttgagatagtttaaaaagcattcactatctgtaggccattactaa
aaacacagagagtacggttgagtaaggctttgtccctcttctctaggagc
cagatgagatcaggtagacgtgtataagctggggtttgagacatcttcct
taaaggataccagcaaggctgtctagagaagagagattagactttgaggg
aattagtaacatggtgggagggagagagggagagaggga
gaattcatcggctttctgccttaccttctgttttactgctttgatgaggc
gccatgaccaccactactctttttttttctttttctgattttacaaaatt
taatatgcatttattatttaataggaaatatctctaaacttagaaattga
ggaaaatcatctcaacttaacacagaccatttacacgaaacccacagata
aggtcatgcttaacggcaaaagattgactatcataaaaggagagcaggtt
aatgattagctggggttcagggcagatgggatgtggatttgttctgtgtt
cgatattttatgcttaataatagcagtagaccatgaaactccattcctga
aaacttcacatgtgaacaaaccacatacaaacaaaaatgaattcaagtaa
aattgagaaataagaacaaatttgatagattgtatcaattgagattctct
taacagtgataatgtccttttacaataccacactaagggaaactggacag
aagatgcatcatttttgttaaatacatatatgatgcttgcctccaaataa
aagtattcttatatcagagattctgagatttgattttaaggacatgagac
cagatgtgtgcttcctatgtgaaatatatatattttttctttttttggtt
tttcgagacagggtttctctgtatagccctggctgtcctggaactccctc
tgtagaccaggctggccttgaactcagaaatctgcctgcctctgcctcct
gagtgctgggattaaaggcgtgtgccaccacgcccagctgtgaaatatat
tttaaagatgaatatataaatacattaagaattgaagaaagttttatata
aatacatttatttattatttctctctttttttttttttacatcttgacca
ccatttccctctctctcttcacccctacccctccccccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77282147_77282485
seq2: B6Ng01-060J10.b_52_390 (reverse)

seq1  TCCCTCTCTCCCTCTCTCCCTCCCACCATGTTACTAATTCCCTCAAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCTCCCTCTCTCCCTCCCACCATGTTACTAATTCCCTCAAAGTC  50

seq1  TAATCTCTCTTCTCTAGACAGCCTTGCTGGTATCCTTTAAGGAAGATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCTCTTCTCTAGACAGCCTTGCTGGTATCCTTTAAGGAAGATGTC  100

seq1  TCAAACCCCAGCTTATACACGTCTACCTGATCTCATCTGGCTCCTAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCCCAGCTTATACACGTCTACCTGATCTCATCTGGCTCCTAGAGA  150

seq1  AGAGGGACAAAGCCTTACTCAACCGTACTCTCTGTGTTTTTAGTAATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGACAAAGCCTTACTCAACCGTACTCTCTGTGTTTTTAGTAATGGC  200

seq1  CTACAGATAGTGAATGCTTTTTAAACTATCTCAAGAGGGGCTGAAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGATAGTGAATGCTTTTTAAACTATCTCAAGAGGGGCTGAAAAGAA  250

seq1  GAAATGAAGAAGAAAAGTATATTCTAAGTGAATGTTCTAGTTCCTCCGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAAGAAGAAAAGTATATTCTAAGTGAATGTTCTAGTTCCTCCGTC  300

seq1  CCTGGTTTGCTCCCTAAATCAACTTGTGCTTCATGGTAA  339
      |||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTTGCTCCCTAAATCAACTTGTGCTTCATGGTAA  339

seq1: chr14_77116813_77117759
seq2: B6Ng01-060J10.g_70_1009

seq1  GAATTCATCGGCTTTCTGCCTTACCTTCTGTTTTACTGCTTTGATGAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCGGCTTTCTGCCTTACCTTCTGTTTTACTGCTTTGATGAGGC  50

seq1  GCCATGACCACCACTACTCTTTTTTTTTCTTTTTCTGATTTTACAAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGACCACCACTACTCTTTTTTTTTCTTTTTCTGATTTTACAAAATT  100

seq1  TAATATGCATTTATTATTTAATAGGAAATATCTCTAAACTTAGAAATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGCATTTATTATTTAATAGGAAATATCTCTAAACTTAGAAATTGA  150

seq1  GGAAAATCATCTCAACTTAACACAGACCATTTACACGAAACCCACAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATCATCTCAACTTAACACAGACCATTTACACGAAACCCACAGATA  200

seq1  AGGTCATGCTTAACGGCAAAAGATTGACTATCATAAAAGGAGAGCAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCATGCTTAACGGCAAAAGATTGACTATCATAAAAGGAGAGCAGGTT  250

seq1  AATGATTAGCTGGGGTTCAGGGCAGATGGGATGTGGATTTGTTCTGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTAGCTGGGGTTCAGGGCAGATGGGATGTGGATTTGTTCTGTGTT  300

seq1  CGATATTTTATGCTTAATAATAGCAGTAGACCATGAAACTCCATTCCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATATTTTATGCTTAATAATAGCAGTAGACCATGAAACTCCATTCCTGA  350

seq1  AAACTTCACATGTGAACAAACCACATACAAACAAAAATGAATTCAAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCACATGTGAACAAACCACATACAAACAAAAATGAATTCAAGTAA  400

seq1  AATTGAGAAATAAGAACAAATTTGATAGATTGTATCAATTGAGATTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGAAATAAGAACAAATTTGATAGATTGTATCAATTGAGATTCTCT  450

seq1  TAACAGTGATAATGTCCTTTTACAATACCACACTAAGGGAAACTGGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTGATAATGTCCTTTTACAATACCACACTAAGGGAAACTGGACAG  500

seq1  AAGATGCATCATTTTTGTTAAATACATATATGATGCTTGCCTCCAAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCATCATTTTTGTTAAATACATATATGATGCTTGCCTCCAAATAA  550

seq1  AAGTATTCTTATATCAGAGATTCTGAGATTTGATTTTAAGGACATGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTCTTATATCAGAGATTCTGAGATTTGATTTTAAGGACATGAGAC  600

seq1  CAGATGTGTGCTTCCTATGTGAAATATATATATTTTTTCTTTTTTTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGTGCTTCCTATGTGAAATATATATATTTTTTCTTTTTTTGGTT  650

seq1  TTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCCCTC  700

seq1  TGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCT  750

seq1  GAGTGCTGGGATTAAAGGCGTGTGCCACCACGCCCAGCTGTGAAATATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGGGATTAAAGGCGTGTGCCACCACGCCCAGCTGTGAAATATAT  800

seq1  TTTAAAGATGAATATATAAATACATTAAGAATTGAAGAAAGTTTTTATAT  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTAAAGATGAATATATAAATACATTAAGAATTGAAGAAAG-TTTTATAT  849

seq1  AAATACATTTATTTTATTTATTTCTCTCTTTTTTTTTTTTTTACATCCTG  900
      ||||||||||||||   ||||||||||| |||||||||||||||||| ||
seq2  AAATACATTTATTT--ATTATTTCTCTC-TTTTTTTTTTTTTACATCTTG  896

seq1  ACCACCATTTCCCCTCTCTCCTCTCCACCCCCTACCCCCCCCCCCAC  947
      |||||||||| |||||||| |||| || |||||||||| ||||||||
seq2  ACCACCATTT-CCCTCTCT-CTCTTCA-CCCCTACCCCTCCCCCCAC  940