BAC Information

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BAC

Clone NameB6Ng01-061E09
Chromosome14 (Build37)
Map Location 61,919,431 - 61,919,977
singlet/doubletsinglet
Overlap genenone
Upstream geneMtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep, LOC100043586, Tnfrsf19, Sacs, Sgcg
Downstream geneArl11, EG432864, Ebpl, Kpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253, Dleu7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061E09.b
ACCDH881996
length840
definitionDH881996|Mus musculus domesticus DNA, BAC clone: B6Ng01-061E09, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgctgtccttgactcagaaggtgatttcatcccagcctaaat
agtccagcttcttttgtgcttctgcattgcatctgcctacatgttgtttt
tatggtgccttgtggacgaatgtatatgacagtgaaaccctggctcatga
aggaagtgaaaaagaggggagtttgtggcatgtcccttcggtgctaggct
tcatatgtcagttgtgggctaaaatgcggtctagttgcatcagggggtac
tactggactctgcaaagacgatgggggacattctgtgtgaatgggggaag
caagctgaagaggtttcaaagcaaggaaatgtgtcagacataaaaataaa
aaacaaggtattgtatactttaaaatgtcagtatttaaagaggaaatgag
aattggttttgttcatctatcaaaaactattttagttgtaaatttcaatg
gctttttattagaaatggccagggcaaacatagtgaaagtcagtaagccc
acatttcaatgtaaaaggaccgggaaatacctgattgatgtggctgacct
caggtgtctactcttgttggagtgctacaagttaggccacattcatgatc
acaaaacccatcttcataaagttaaaaatggaactcatattttaagttga
tgaagtatcagaaactaaactggaacccacactgataagaaaaagagggt
cttgaagcatgaagagagtgatgtgtctgtctaacgggccctctaagacc
cgctttaataccacagtctctccgggtgaaatatttctcacattacaact
cagactccagactcttaaaacaaaaatcacaagcacaggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_61919431_61919977
seq2: B6Ng01-061E09.b_333_883

seq1  AATGGG---AGCAAGCTGAAGAGGTTTCAAAGCAAGGAAATGTGTCAGAC  47
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGGAAGCAAGCTGAAGAGGTTTCAAAGCAAGGAAATGTGTCAGAC  50

seq1  ATAAAAATAAAAAACAAGGTATTGTATACTTTAAAATGTCAGTATTTAAA  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATAAAAAACAAGGTATTGTATACTTTAAAATGTCAGTATTTAAA  100

seq1  GAGGAAATGAGAATTGGTTTTGTTCATCTATCAAAAACTATTTTAGTTGT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAATGAGAATTGGTTTTGTTCATCTATCAAAAACTATTTTAGTTGT  150

seq1  AAATTTCAATGGCTTTTTATTAGAAATGGCCAGGGCAAACATAGTGAAAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCAATGGCTTTTTATTAGAAATGGCCAGGGCAAACATAGTGAAAG  200

seq1  TCAGTAAGCCCACATTTCAATGTAAAAGGACCGGGAAATACCTGATTGAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAGCCCACATTTCAATGTAAAAGGACCGGGAAATACCTGATTGAT  250

seq1  GTGGCTGACCTCAGGTGTCTACTCTTGTTGGAGTGCTACAAGTTAGGCCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGACCTCAGGTGTCTACTCTTGTTGGAGTGCTACAAGTTAGGCCA  300

seq1  CATTCATGATCACAAAACCCATCTTCATAAAGTTAAAAATGGAACTCACA  347
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CATTCATGATCACAAAACCCATCTTCATAAAGTTAAAAATGGAACTCATA  350

seq1  TTTTAAGTTGATGAAGTATCAGAAACTAAACTGGAACCCACACTGATAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTTGATGAAGTATCAGAAACTAAACTGGAACCCACACTGATAAG  400

seq1  -AAAAGAGGGTC-TGAAGCATGAAGAGAGTGATGTGTCTGTCCAACGGGC  445
       ||||||||||| ||||||||||||||||||||||||||||| |||||||
seq2  AAAAAGAGGGTCTTGAAGCATGAAGAGAGTGATGTGTCTGTCTAACGGGC  450

seq1  CCTCTAAGACCCGCTTTAATACCACAGTCTCTCCAGGTGAAATATTTCTC  495
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCTCTAAGACCCGCTTTAATACCACAGTCTCTCCGGGTGAAATATTTCTC  500

seq1  ACATTACAACTCAGACATCCAGACTCATAAAACAGAAATCACAAGCACAG  545
      |||||||||||||||| ||||||||| ||||||| |||||||||||||||
seq2  ACATTACAACTCAGAC-TCCAGACTCTTAAAACAAAAATCACAAGCACAG  549

seq1  GG  547
      ||
seq2  GG  551