BAC Information

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BAC

Clone NameB6Ng01-061M23
Chromosome14 (Build37)
Map Location 78,952,004 - 79,091,373
singlet/doubletdoublet
Overlap geneDgkh
Upstream geneD230005D02Rik, Gm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11
Downstream geneLOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061M23.bB6Ng01-061M23.g
ACCDH882388DH882389
length607789
definitionDH882388|Mus musculus domesticus DNA, BAC clone: B6Ng01-061M23, 5' end.DH882389|Mus musculus domesticus DNA, BAC clone: B6Ng01-061M23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,090,767 - 79,091,373)(78,952,004 - 78,952,803)
sequence
gaattcctccttcaggaatgtgtatacataaacgctcacaggctcacaca
atactcaaaatcaataagcaggcaaaccaaaacaacctttaaaaccagtg
ccgagaagtgtgagggagccaggaggagtgttgagcatcccaggaggagg
aagtgaatggatccaaccaacacagactgaagtggggtcatggctacaga
tggagatggctcataaaccttaatcccaatgtagatatgattctcagtaa
taaaagagctcccatttatcggtgtccatgtgagcacattcagtatgtgg
catgaaggtgtgtgcacacatgtgttctttatgtgttgacagatacttga
ggcataaaatggatgtaagagacaatttgtctgggctgtgtttattcaca
ggtatctcttggatgttctttgctggctgttcatcctcttgttgtgcaaa
cataaatagtacagtctgctctttcttagctcctgcatcataggaaatga
tcccatctgctattcagtgctgtgtgtaaaagtgcttgtgaggttttagc
tgaggtgtaaatatttaaaacaatgagattctttttgtgggggttgggat
gggtgga
gaattcatgttttgagttataattttgtcctttccatgtttccctatgga
acccaggctaatctggaaggcacaatacagcccaggctggccccaagctc
atagcattgctcagtgctgagattacagaagggaatcaccacaccccgcc
ctttaattgtaaagcatcaactttttcaaagctaagggacatgcttgtcc
tagtcctaatttatctgtcctcttactttaaagagatttatttttatttt
taattatctgtctgtctgtctgtctgtctgtctctgtgtgtgagtgccat
gtgtgaggaaatgacagaaaagagcgccagactcctggagctggagagac
aggctctgtgagcatcccacgtgggtgctgagagccaaactcaggtcctc
ttagccactgagtcctttctctacgccccatcctcacggcactctctata
gcagcacagtgacattttacagttaaaatgcccccaccgatctctacagt
ggacagcagagaaatgatggcactctctgcttcattaactcctcggagtg
catatgctgtgttttagaacaaacattatggaaaatatctagaacacagg
gtgtccccgttcagttattttaaaaatattcatcaataaattaaattttg
ccagatgtgatggcaggcatatgtcagtaatctaaattggctcagcagta
gactgcttgcattctgagtgcaaatccttgggttctgcgaaacacttttc
cttcatgttatgacatgaccaatctgctcagtagcctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_79090767_79091373
seq2: B6Ng01-061M23.b_49_655 (reverse)

seq1  TCCACCCATCCCAACCCCCACAAAAAGAATCTCATTGTTTTAAATATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCATCCCAACCCCCACAAAAAGAATCTCATTGTTTTAAATATTTA  50

seq1  CACCTCAGCTAAAACCTCACAAGCACTTTTACACACAGCACTGAATAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCAGCTAAAACCTCACAAGCACTTTTACACACAGCACTGAATAGCA  100

seq1  GATGGGATCATTTCCTATGATGCAGGAGCTAAGAAAGAGCAGACTGTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGATCATTTCCTATGATGCAGGAGCTAAGAAAGAGCAGACTGTACT  150

seq1  ATTTATGTTTGCACAACAAGAGGATGAACAGCCAGCAAAGAACATCCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTTTGCACAACAAGAGGATGAACAGCCAGCAAAGAACATCCAAG  200

seq1  AGATACCTGTGAATAAACACAGCCCAGACAAATTGTCTCTTACATCCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCTGTGAATAAACACAGCCCAGACAAATTGTCTCTTACATCCATT  250

seq1  TTATGCCTCAAGTATCTGTCAACACATAAAGAACACATGTGTGCACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCCTCAAGTATCTGTCAACACATAAAGAACACATGTGTGCACACAC  300

seq1  CTTCATGCCACATACTGAATGTGCTCACATGGACACCGATAAATGGGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGCCACATACTGAATGTGCTCACATGGACACCGATAAATGGGAGC  350

seq1  TCTTTTATTACTGAGAATCATATCTACATTGGGATTAAGGTTTATGAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATTACTGAGAATCATATCTACATTGGGATTAAGGTTTATGAGCC  400

seq1  ATCTCCATCTGTAGCCATGACCCCACTTCAGTCTGTGTTGGTTGGATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCATCTGTAGCCATGACCCCACTTCAGTCTGTGTTGGTTGGATCCA  450

seq1  TTCACTTCCTCCTCCTGGGATGCTCAACACTCCTCCTGGCTCCCTCACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTCCTCCTCCTGGGATGCTCAACACTCCTCCTGGCTCCCTCACAC  500

seq1  TTCTCGGCACTGGTTTTAAAGGTTGTTTTGGTTTGCCTGCTTATTGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGGCACTGGTTTTAAAGGTTGTTTTGGTTTGCCTGCTTATTGATTT  550

seq1  TGAGTATTGTGTGAGCCTGTGAGCGTTTATGTATACACATTCCTGAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATTGTGTGAGCCTGTGAGCGTTTATGTATACACATTCCTGAAGGA  600

seq1  GGAATTC  607
      |||||||
seq2  GGAATTC  607

seq1: chr14_78952004_78952803
seq2: B6Ng01-061M23.g_71_859

seq1  GAATTCATGTTTTGAGTTATAATTTTGTCCTTTCCATGTTTCCCTATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTTTTGAGTTATAATTTTGTCCTTTCCATGTTTCCCTATGGA  50

seq1  ACCCAGGCTAATCTGGAAGGCACAATACAGCCCAGGCTGGCCCCAAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGCTAATCTGGAAGGCACAATACAGCCCAGGCTGGCCCCAAGCTC  100

seq1  ATAGCATTGCTCAGTGCTGAGATTACAGAAGGGAATCACCACACCCCGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATTGCTCAGTGCTGAGATTACAGAAGGGAATCACCACACCCCGCC  150

seq1  CTTTAATTGTAAAGCATCAACTTTTTCAAAGCTAAGGGACATGCTTGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTGTAAAGCATCAACTTTTTCAAAGCTAAGGGACATGCTTGTCC  200

seq1  TAGTCCTAATTTATCTGTCCTCTTACTTTAAAGAGATTTATTTTTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTAATTTATCTGTCCTCTTACTTTAAAGAGATTTATTTTTATTTT  250

seq1  TAATTATCTGTCTGTCTGTCTGTCTGTCTGTCTCTGTGTGTGAGTGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATCTGTCTGTCTGTCTGTCTGTCTGTCTCTGTGTGTGAGTGCCAT  300

seq1  GTGTGAGGAAATGACAGAAAAGAGCGCCAGACTCCTGGAGCTGGAGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGGAAATGACAGAAAAGAGCGCCAGACTCCTGGAGCTGGAGAGAC  350

seq1  AGGCTCTGTGAGCATCCCACGTGGGTGCTGAGAGCCAAACTCAGGTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTGTGAGCATCCCACGTGGGTGCTGAGAGCCAAACTCAGGTCCTC  400

seq1  TTAGCCACTGAGTCCTTTCTCTACGCCCCATCCTCACGGCACTCTCTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCACTGAGTCCTTTCTCTACGCCCCATCCTCACGGCACTCTCTATA  450

seq1  GCAGCACAGTGACATTTTACAGTTAAAATGCCCCCACCGATCTCTACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACAGTGACATTTTACAGTTAAAATGCCCCCACCGATCTCTACAGT  500

seq1  GGACAGCAGAGAAATGATGGCACTCTCTGCTTCATTAACTCCTCGGAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCAGAGAAATGATGGCACTCTCTGCTTCATTAACTCCTCGGAGTG  550

seq1  CATATGCTGTGTTTTAGAACAAACATTATGGAAAATATCTAGAACACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCTGTGTTTTAGAACAAACATTATGGAAAATATCTAGAACACAGG  600

seq1  GTGTCCCCGTTCAAGTTATTTTAAAAAATATTCATCAATAAATTAAAATT  650
      |||||||||||| ||||||||| ||||||||||||||||||||||||  |
seq2  GTGTCCCCGTTC-AGTTATTTT-AAAAATATTCATCAATAAATTAAA--T  646

seq1  TTTGCCAGATGTGATGGCAGGCATATGTCAGTAATCCTAAATTGGCTCAG  700
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTTGCCAGATGTGATGGCAGGCATATGTCAGTAAT-CTAAATTGGCTCAG  695

seq1  CAGTAGACTGCTTGCATTCCTGAGTGCAAATCCTTGTGTTCTGCGAAAAC  750
      |||||||||||||||||| ||||||||||||||||| |||||||| ||||
seq2  CAGTAGACTGCTTGCATT-CTGAGTGCAAATCCTTGGGTTCTGCG-AAAC  743

seq1  AGCTCTCCCTTCATGTTCATGAACAATGACCAATCTGCTCAGTAGCCTGT  800
      | || | |||||||||| ||||   |||||||||||||||||||||||||
seq2  A-CTTTTCCTTCATGTT-ATGA--CATGACCAATCTGCTCAGTAGCCTGT  789